RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 FAM182BQ5T319 152 aa16.15■□□□□ 0.18
GRAMD1A-209ENST00000598580 CDK19Q9BWU1 502 aa16.15■□□□□ 0.18
GRAMD1A-209ENST00000598580 PAK3O75914 559 aaPredicted RBP16.14■□□□□ 0.17
GRAMD1A-209ENST00000598580 ATP7BP35670 1465 aa16.14■□□□□ 0.17
GRAMD1A-209ENST00000598580 NWD2Q9ULI1 1742 aa16.13■□□□□ 0.17
GRAMD1A-209ENST00000598580 SPATA31A5Q5VU36 1347 aa16.13■□□□□ 0.17
GRAMD1A-209ENST00000598580 SPATA31A7Q8IWB4 1347 aa16.13■□□□□ 0.17
GRAMD1A-209ENST00000598580 NUTM2GQ5VZR2 741 aa16.12■□□□□ 0.17
GRAMD1A-209ENST00000598580 EIF3AQ14152 1382 aaKnown RBP16.12■□□□□ 0.17
GRAMD1A-209ENST00000598580 NRAPQ86VF7 1730 aa16.11■□□□□ 0.17
GRAMD1A-209ENST00000598580 CHRNA2Q15822 529 aa16.11■□□□□ 0.17
GRAMD1A-209ENST00000598580 NBPF8Q3BBV2 869 aa16.11■□□□□ 0.17
GRAMD1A-209ENST00000598580 ARHGEF28Q8N1W1 1705 aaKnown RBP16.1■□□□□ 0.17
GRAMD1A-209ENST00000598580 KIAA0232Q92628 1395 aa16.1■□□□□ 0.17
GRAMD1A-209ENST00000598580 CRYBG1Q9Y4K1 1723 aa16.09■□□□□ 0.17
GRAMD1A-209ENST00000598580 PLEKHG3A1L390 1219 aa16.09■□□□□ 0.17
GRAMD1A-209ENST00000598580 ZC3H6P61129 1189 aaKnown RBP16.09■□□□□ 0.17
GRAMD1A-209ENST00000598580 PRDM11Q9NQV5 511 aa16.09■□□□□ 0.17
GRAMD1A-209ENST00000598580 ACEP12821 1306 aa16.09■□□□□ 0.17
GRAMD1A-209ENST00000598580 POLR3AO14802 1390 aaPredicted RBP16.09■□□□□ 0.17
GRAMD1A-209ENST00000598580 CCDC61Q9Y6R9 512 aa16.08■□□□□ 0.16
GRAMD1A-209ENST00000598580 COL14A1Q05707 1796 aaKnown RBP16.08■□□□□ 0.16
GRAMD1A-209ENST00000598580 A0A0G2JS52 829 aa16.07■□□□□ 0.16
GRAMD1A-209ENST00000598580 MYT1Q01538 1121 aa16.07■□□□□ 0.16
GRAMD1A-209ENST00000598580 SPATA31A1Q5TZJ5 1347 aa16.06■□□□□ 0.16
GRAMD1A-209ENST00000598580 EN1Q05925 392 aaPredicted RBP16.05■□□□□ 0.16
GRAMD1A-209ENST00000598580 CABP2Q9NPB3 220 aa16.05■□□□□ 0.16
GRAMD1A-209ENST00000598580 PSDA5PKW4 1024 aaPredicted RBP16.04■□□□□ 0.16
GRAMD1A-209ENST00000598580 SF3B2Q13435 895 aaKnown RBP16.04■□□□□ 0.16
GRAMD1A-209ENST00000598580 STRN4Q9NRL3 753 aa16.04■□□□□ 0.16
GRAMD1A-209ENST00000598580 L3MBTL2Q969R5 705 aa16.03■□□□□ 0.16
GRAMD1A-209ENST00000598580 THSD7AQ9UPZ6 1657 aa16.02■□□□□ 0.16
GRAMD1A-209ENST00000598580 LARP1Q6PKG0 1096 aaKnown RBP16.02■□□□□ 0.16
GRAMD1A-209ENST00000598580 ABTB2Q8N961 1025 aa16.02■□□□□ 0.16
GRAMD1A-209ENST00000598580 SIN3AQ96ST3 1273 aa16.02■□□□□ 0.16
GRAMD1A-209ENST00000598580 TOPAZ1Q8N9V7 1692 aa16.02■□□□□ 0.15
GRAMD1A-209ENST00000598580 CAMTA1Q9Y6Y1 1673 aa16.02■□□□□ 0.15
GRAMD1A-209ENST00000598580 USP19O94966 1318 aa16.01■□□□□ 0.15
GRAMD1A-209ENST00000598580 USP35Q9P2H5 1018 aa16.01■□□□□ 0.15
GRAMD1A-209ENST00000598580 CENPJQ9HC77 1338 aaPredicted RBP16■□□□□ 0.15
GRAMD1A-209ENST00000598580 BAG6P46379 1132 aa16■□□□□ 0.15
GRAMD1A-209ENST00000598580 PHRF1Q9P1Y6 1649 aaKnown RBP15.99■□□□□ 0.15
GRAMD1A-209ENST00000598580 SRPK2P78362 688 aaKnown RBP15.99■□□□□ 0.15
GRAMD1A-209ENST00000598580 EZH2Q15910 746 aaKnown RBP15.99■□□□□ 0.15
GRAMD1A-209ENST00000598580 CAMKK2Q96RR4 588 aa15.99■□□□□ 0.15
GRAMD1A-209ENST00000598580 CABP1Q9NZU7 370 aa15.99■□□□□ 0.15
GRAMD1A-209ENST00000598580 PPIP5K1Q6PFW1 1433 aa15.99■□□□□ 0.15
GRAMD1A-209ENST00000598580 KIAA1210Q9ULL0 1709 aa15.99■□□□□ 0.15
GRAMD1A-209ENST00000598580 TRIM37O94972 964 aa15.98■□□□□ 0.15
GRAMD1A-209ENST00000598580 GCP02774 474 aa15.98■□□□□ 0.15
GRAMD1A-209ENST00000598580 SSH2Q76I76 1423 aa15.98■□□□□ 0.15
GRAMD1A-209ENST00000598580 CPDO75976 1380 aa15.98■□□□□ 0.15
GRAMD1A-209ENST00000598580 ITSN1Q15811 1721 aa15.97■□□□□ 0.15
GRAMD1A-209ENST00000598580 BARGINQ6ZT62 677 aa15.97■□□□□ 0.15
GRAMD1A-209ENST00000598580 NRKQ7Z2Y5 1582 aa15.96■□□□□ 0.15
GRAMD1A-209ENST00000598580 EVA1CP58658 441 aa15.96■□□□□ 0.15
GRAMD1A-209ENST00000598580 DISP2A7MBM2 1401 aa15.95■□□□□ 0.14
GRAMD1A-209ENST00000598580 R3HDM1Q15032 1099 aaKnown RBP15.95■□□□□ 0.14
GRAMD1A-209ENST00000598580 NLRP13Q86W25 1043 aa15.95■□□□□ 0.14
GRAMD1A-209ENST00000598580 FAM196AQ6ZSG2 479 aa15.94■□□□□ 0.14
GRAMD1A-209ENST00000598580 TCP11L2Q8N4U5 519 aa15.94■□□□□ 0.14
GRAMD1A-209ENST00000598580 LMO7Q8WWI1 1683 aa15.94■□□□□ 0.14
GRAMD1A-209ENST00000598580 AXIN2Q9Y2T1 843 aa15.93■□□□□ 0.14
GRAMD1A-209ENST00000598580 USP6P35125 1406 aa15.93■□□□□ 0.14
GRAMD1A-209ENST00000598580 TNS1Q9HBL0 1735 aaKnown RBP15.92■□□□□ 0.14
GRAMD1A-209ENST00000598580 APBA3O96018 575 aa15.92■□□□□ 0.14
GRAMD1A-209ENST00000598580 NLRP6P59044 892 aa15.92■□□□□ 0.14
GRAMD1A-209ENST00000598580 NEUROD1Q13562 356 aa15.92■□□□□ 0.14
GRAMD1A-209ENST00000598580 COL5A2P05997 1499 aaPredicted RBP15.91■□□□□ 0.14
GRAMD1A-209ENST00000598580 PDE3BQ13370 1112 aa15.9■□□□□ 0.14
GRAMD1A-209ENST00000598580 PTF1AQ7RTS3 328 aa15.9■□□□□ 0.14
GRAMD1A-209ENST00000598580 RGPD1P0DJD0 1748 aa15.9■□□□□ 0.14
GRAMD1A-209ENST00000598580 ZBTB7CA1YPR0 619 aa15.89■□□□□ 0.13
GRAMD1A-209ENST00000598580 LRP5O75197 1615 aa15.89■□□□□ 0.13
GRAMD1A-209ENST00000598580 BRD4O60885 1362 aaPredicted RBP15.88■□□□□ 0.13
GRAMD1A-209ENST00000598580 AATKQ6ZMQ8 1374 aa15.88■□□□□ 0.13
GRAMD1A-209ENST00000598580 QRICH2Q9H0J4 1663 aa15.88■□□□□ 0.13
GRAMD1A-209ENST00000598580 SLIT3O75094 1523 aa15.88■□□□□ 0.13
GRAMD1A-209ENST00000598580 THRAP3Q9Y2W1 955 aaKnown RBP15.87■□□□□ 0.13
GRAMD1A-209ENST00000598580 TTC21BQ7Z4L5 1316 aa15.87■□□□□ 0.13
GRAMD1A-209ENST00000598580 EVC2Q86UK5 1308 aa15.87■□□□□ 0.13
GRAMD1A-209ENST00000598580 ARHGEF25Q86VW2 580 aa15.86■□□□□ 0.13
GRAMD1A-209ENST00000598580 CRB1P82279 1406 aa15.85■□□□□ 0.13
GRAMD1A-209ENST00000598580 TRPM1Q7Z4N2 1603 aa15.85■□□□□ 0.13
GRAMD1A-209ENST00000598580 COL18A1P39060 1754 aa15.85■□□□□ 0.13
GRAMD1A-209ENST00000598580 PIK3C2AO00443 1686 aa15.84■□□□□ 0.13
GRAMD1A-209ENST00000598580 ROCK2O75116 1388 aaKnown RBP15.84■□□□□ 0.13
GRAMD1A-209ENST00000598580 CPSF1Q10570 1443 aaKnown RBP15.84■□□□□ 0.13
GRAMD1A-209ENST00000598580 SOX12O15370 315 aa15.83■□□□□ 0.12
GRAMD1A-209ENST00000598580 MARCH10Q8NA82 808 aaPredicted RBP15.83■□□□□ 0.12
GRAMD1A-209ENST00000598580 TOM1L2Q6ZVM7 507 aa15.82■□□□□ 0.12
GRAMD1A-209ENST00000598580 ZNF692Q9BU19 519 aaPredicted RBP15.82■□□□□ 0.12
GRAMD1A-209ENST00000598580 PARD3Q8TEW0 1356 aa15.82■□□□□ 0.12
GRAMD1A-209ENST00000598580 WDR17Q8IZU2 1322 aa15.81■□□□□ 0.12
GRAMD1A-209ENST00000598580 PROM2Q8N271 834 aa15.81■□□□□ 0.12
GRAMD1A-209ENST00000598580 PEAK1Q9H792 1746 aa15.81■□□□□ 0.12
GRAMD1A-209ENST00000598580 PARP4Q9UKK3 1724 aaKnown RBP15.8■□□□□ 0.12
GRAMD1A-209ENST00000598580 CD163L1Q9NR16 1453 aa15.79■□□□□ 0.12
GRAMD1A-209ENST00000598580 DDB1Q16531 1140 aa15.79■□□□□ 0.12
GRAMD1A-209ENST00000598580 KTN1Q86UP2 1357 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms