RNA–Protein interactions for RNA: ENST00000598256.1

LTBP4-222, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-222ENST00000598256 EDC4Q6P2E9 1401 aaKnown RBP21.86■■□□□ 1.09
LTBP4-222ENST00000598256 JCADQ9P266 1359 aa21.86■■□□□ 1.09
LTBP4-222ENST00000598256 NPHP3Q7Z494 1330 aa21.85■■□□□ 1.09
LTBP4-222ENST00000598256 AHDC1Q5TGY3 1603 aaPredicted RBP21.85■■□□□ 1.09
LTBP4-222ENST00000598256 FOXO3O43524 673 aa21.85■■□□□ 1.09
LTBP4-222ENST00000598256 PIK3C2AO00443 1686 aa21.83■■□□□ 1.09
LTBP4-222ENST00000598256 ALS2Q96Q42 1657 aa21.83■■□□□ 1.09
LTBP4-222ENST00000598256 PSME1Q06323 249 aa21.83■■□□□ 1.09
LTBP4-222ENST00000598256 UPF1Q92900 1129 aaKnown RBP eCLIP21.83■■□□□ 1.09
LTBP4-222ENST00000598256 KNSTRNQ9Y448 316 aa21.82■■□□□ 1.08
LTBP4-222ENST00000598256 PXDNQ92626 1479 aa21.82■■□□□ 1.08
LTBP4-222ENST00000598256 SRCAPQ6ZRS2 3230 aa21.82■■□□□ 1.08
LTBP4-222ENST00000598256 CARD14Q9BXL6 1004 aa21.81■■□□□ 1.08
LTBP4-222ENST00000598256 BRD4O60885 1362 aaPredicted RBP21.81■■□□□ 1.08
LTBP4-222ENST00000598256 USP54Q70EL1 1684 aa21.8■■□□□ 1.08
LTBP4-222ENST00000598256 XPCQ01831 940 aaPredicted RBP21.8■■□□□ 1.08
LTBP4-222ENST00000598256 DDX17Q92841 729 aaKnown RBP21.8■■□□□ 1.08
LTBP4-222ENST00000598256 LRP6O75581 1613 aa21.8■■□□□ 1.08
LTBP4-222ENST00000598256 KRT28Q7Z3Y7 464 aa21.79■■□□□ 1.08
LTBP4-222ENST00000598256 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.79■■□□□ 1.08
LTBP4-222ENST00000598256 MARF1Q9Y4F3 1742 aaKnown RBP21.79■■□□□ 1.08
LTBP4-222ENST00000598256 CGNL1Q0VF96 1302 aa21.79■■□□□ 1.08
LTBP4-222ENST00000598256 COL16A1Q07092 1604 aaPredicted RBP21.78■■□□□ 1.08
LTBP4-222ENST00000598256 SSH2Q76I76 1423 aa21.78■■□□□ 1.08
LTBP4-222ENST00000598256 TTC21AQ8NDW8 1320 aa21.78■■□□□ 1.08
LTBP4-222ENST00000598256 PAK3O75914 559 aaPredicted RBP21.77■■□□□ 1.08
LTBP4-222ENST00000598256 TTC21BQ7Z4L5 1316 aa21.77■■□□□ 1.07
LTBP4-222ENST00000598256 PER1O15534 1290 aaPredicted RBP21.76■■□□□ 1.07
LTBP4-222ENST00000598256 TNS3Q68CZ2 1445 aa21.75■■□□□ 1.07
LTBP4-222ENST00000598256 SBNO1A3KN83 1393 aa21.74■■□□□ 1.07
LTBP4-222ENST00000598256 NSD2O96028 1365 aa21.74■■□□□ 1.07
LTBP4-222ENST00000598256 DIEXFQ68CQ4 756 aaKnown RBP21.74■■□□□ 1.07
LTBP4-222ENST00000598256 SOS2Q07890 1332 aaPredicted RBP21.74■■□□□ 1.07
LTBP4-222ENST00000598256 SPATA31A6Q5VVP1 1343 aa21.74■■□□□ 1.07
LTBP4-222ENST00000598256 CRYBG1Q9Y4K1 1723 aa21.73■■□□□ 1.07
LTBP4-222ENST00000598256 CNGB1Q14028 1251 aaPredicted RBP21.73■■□□□ 1.07
LTBP4-222ENST00000598256 PHRF1Q9P1Y6 1649 aaKnown RBP21.73■■□□□ 1.07
LTBP4-222ENST00000598256 ABCA3Q99758 1704 aa21.72■■□□□ 1.07
LTBP4-222ENST00000598256 ZNF772Q68DY9 489 aaPredicted RBP21.72■■□□□ 1.07
LTBP4-222ENST00000598256 NME9Q86XW9 330 aa21.72■■□□□ 1.07
LTBP4-222ENST00000598256 NPC1L1Q9UHC9 1359 aa21.72■■□□□ 1.07
LTBP4-222ENST00000598256 AMER1Q5JTC6 1135 aaPredicted RBP21.71■■□□□ 1.07
LTBP4-222ENST00000598256 CC2D1BQ5T0F9 858 aaKnown RBP21.71■■□□□ 1.07
LTBP4-222ENST00000598256 LMOD2Q6P5Q4 547 aa21.7■■□□□ 1.06
LTBP4-222ENST00000598256 ABTB2Q8N961 1025 aa21.7■■□□□ 1.06
LTBP4-222ENST00000598256 GGNBP2Q9H3C7 697 aa21.7■■□□□ 1.06
LTBP4-222ENST00000598256 FYB1O15117 783 aa21.69■■□□□ 1.06
LTBP4-222ENST00000598256 SPATA31A3Q5VYP0 1347 aa21.69■■□□□ 1.06
LTBP4-222ENST00000598256 ARHGEF10O15013 1369 aa21.69■■□□□ 1.06
LTBP4-222ENST00000598256 OVOS2A0A0J9YW53 1432 aa21.69■■□□□ 1.06
LTBP4-222ENST00000598256 OVOS2Q6IE36 1432 aa21.69■■□□□ 1.06
LTBP4-222ENST00000598256 MAP2P11137 1827 aaKnown RBP21.69■■□□□ 1.06
LTBP4-222ENST00000598256 MEX3CQ5U5Q3 659 aaKnown RBP21.68■■□□□ 1.06
LTBP4-222ENST00000598256 COL22A1Q8NFW1 1626 aaPredicted RBP21.68■■□□□ 1.06
LTBP4-222ENST00000598256 SHPRHQ149N8 1683 aa21.68■■□□□ 1.06
LTBP4-222ENST00000598256 LTN1O94822 1766 aa21.67■■□□□ 1.06
LTBP4-222ENST00000598256 USP31Q70CQ4 1352 aa21.66■■□□□ 1.06
LTBP4-222ENST00000598256 ANP32CO43423 234 aa21.66■■□□□ 1.06
LTBP4-222ENST00000598256 NLRP6P59044 892 aa21.66■■□□□ 1.06
LTBP4-222ENST00000598256 NUTM2GQ5VZR2 741 aa21.66■■□□□ 1.06
LTBP4-222ENST00000598256 COG3Q96JB2 828 aa21.66■■□□□ 1.06
LTBP4-222ENST00000598256 RXRBP28702 533 aa21.65■■□□□ 1.06
LTBP4-222ENST00000598256 ZRANB1Q9UGI0 708 aa21.65■■□□□ 1.06
LTBP4-222ENST00000598256 SLIT3O75094 1523 aa21.65■■□□□ 1.06
LTBP4-222ENST00000598256 MORC1Q86VD1 984 aa21.64■■□□□ 1.05
LTBP4-222ENST00000598256 NLRP13Q86W25 1043 aa21.64■■□□□ 1.05
LTBP4-222ENST00000598256 LRRC59Q96AG4 307 aaKnown RBP21.64■■□□□ 1.05
LTBP4-222ENST00000598256 PARD3Q8TEW0 1356 aa21.63■■□□□ 1.05
LTBP4-222ENST00000598256 PLEKHG5O94827 1062 aa21.62■■□□□ 1.05
LTBP4-222ENST00000598256 PNPLA6Q8IY17 1366 aa21.61■■□□□ 1.05
LTBP4-222ENST00000598256 CDK12Q9NYV4 1490 aaPredicted RBP21.6■■□□□ 1.05
LTBP4-222ENST00000598256 RALBP1Q15311 655 aa21.6■■□□□ 1.05
LTBP4-222ENST00000598256 PRKRIP1Q9H875 184 aaPredicted RBP21.6■■□□□ 1.05
LTBP4-222ENST00000598256 USP19O94966 1318 aa21.59■■□□□ 1.05
LTBP4-222ENST00000598256 NFAT5O94916 1531 aa21.59■■□□□ 1.05
LTBP4-222ENST00000598256 SOX12O15370 315 aa21.58■■□□□ 1.05
LTBP4-222ENST00000598256 TNNT2P45379 298 aaPredicted RBP21.58■■□□□ 1.05
LTBP4-222ENST00000598256 NUTM2BA6NNL0 878 aaPredicted RBP21.57■■□□□ 1.04
LTBP4-222ENST00000598256 NUTM2EB1AL46 878 aaPredicted RBP21.57■■□□□ 1.04
LTBP4-222ENST00000598256 NUTM2AQ8IVF1 878 aaPredicted RBP21.57■■□□□ 1.04
LTBP4-222ENST00000598256 AFF2P51816 1311 aa21.56■■□□□ 1.04
LTBP4-222ENST00000598256 HAP1P54257 671 aaPredicted RBP21.56■■□□□ 1.04
LTBP4-222ENST00000598256 KCNH5Q8NCM2 988 aa21.55■■□□□ 1.04
LTBP4-222ENST00000598256 RGPD5Q99666 1765 aa21.54■■□□□ 1.04
LTBP4-222ENST00000598256 PEAK1Q9H792 1746 aa21.54■■□□□ 1.04
LTBP4-222ENST00000598256 MYBBP1AQ9BQG0 1328 aaKnown RBP21.54■■□□□ 1.04
LTBP4-222ENST00000598256 AATKQ6ZMQ8 1374 aa21.53■■□□□ 1.04
LTBP4-222ENST00000598256 CABLES1Q8TDN4 633 aa21.53■■□□□ 1.04
LTBP4-222ENST00000598256 GCP02774 474 aa21.51■■□□□ 1.03
LTBP4-222ENST00000598256 PPP2R1AP30153 589 aa21.51■■□□□ 1.03
LTBP4-222ENST00000598256 RGS12O14924 1447 aa21.5■■□□□ 1.03
LTBP4-222ENST00000598256 SMG6Q86US8 1419 aaKnown RBP21.5■■□□□ 1.03
LTBP4-222ENST00000598256 FBLN1P23142 703 aa21.49■■□□□ 1.03
LTBP4-222ENST00000598256 QTRT2Q9H974 415 aaKnown RBP21.49■■□□□ 1.03
LTBP4-222ENST00000598256 PLCH1Q4KWH8 1693 aa21.48■■□□□ 1.03
LTBP4-222ENST00000598256 ZBTB7CA1YPR0 619 aa21.48■■□□□ 1.03
LTBP4-222ENST00000598256 RRS1Q15050 365 aaKnown RBP21.48■■□□□ 1.03
LTBP4-222ENST00000598256 COL18A1P39060 1754 aa21.48■■□□□ 1.03
LTBP4-222ENST00000598256 COL14A1Q05707 1796 aaKnown RBP21.48■■□□□ 1.03
LTBP4-222ENST00000598256 ABCC6O95255 1503 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms