RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 RALBP1Q15311 655 aa19.95■□□□□ 0.78
CAPN12-202ENST00000593700 NUDT16Q96DE0 195 aaKnown RBP19.95■□□□□ 0.78
CAPN12-202ENST00000593700 CCDC61Q9Y6R9 512 aa19.95■□□□□ 0.78
CAPN12-202ENST00000593700 NSD2O96028 1365 aa19.95■□□□□ 0.78
CAPN12-202ENST00000593700 ROBO1Q9Y6N7 1651 aa19.94■□□□□ 0.78
CAPN12-202ENST00000593700 PER1O15534 1290 aaPredicted RBP19.94■□□□□ 0.78
CAPN12-202ENST00000593700 SLC12A5Q9H2X9 1139 aa19.94■□□□□ 0.78
CAPN12-202ENST00000593700 NRKQ7Z2Y5 1582 aa19.94■□□□□ 0.78
CAPN12-202ENST00000593700 C1orf167Q5SNV9 1468 aa19.93■□□□□ 0.78
CAPN12-202ENST00000593700 CD163L1Q9NR16 1453 aa19.92■□□□□ 0.78
CAPN12-202ENST00000593700 CGNL1Q0VF96 1302 aa19.92■□□□□ 0.78
CAPN12-202ENST00000593700 PARD3Q8TEW0 1356 aa19.92■□□□□ 0.78
CAPN12-202ENST00000593700 CABP1Q9NZU7 370 aa19.9■□□□□ 0.78
CAPN12-202ENST00000593700 EDC4Q6P2E9 1401 aaKnown RBP19.9■□□□□ 0.78
CAPN12-202ENST00000593700 CPSF1Q10570 1443 aaKnown RBP19.89■□□□□ 0.77
CAPN12-202ENST00000593700 BRINP3Q76B58 766 aa19.89■□□□□ 0.77
CAPN12-202ENST00000593700 MYBBP1AQ9BQG0 1328 aaKnown RBP19.89■□□□□ 0.77
CAPN12-202ENST00000593700 PRR36Q9H6K5 1346 aa19.89■□□□□ 0.77
CAPN12-202ENST00000593700 AHDC1Q5TGY3 1603 aaPredicted RBP19.88■□□□□ 0.77
CAPN12-202ENST00000593700 CC2D1BQ5T0F9 858 aaKnown RBP19.87■□□□□ 0.77
CAPN12-202ENST00000593700 ZNF692Q9BU19 519 aaPredicted RBP19.87■□□□□ 0.77
CAPN12-202ENST00000593700 PLEKHG3A1L390 1219 aa19.85■□□□□ 0.77
CAPN12-202ENST00000593700 CNGB1Q14028 1251 aaPredicted RBP19.85■□□□□ 0.77
CAPN12-202ENST00000593700 CARD14Q9BXL6 1004 aa19.85■□□□□ 0.77
CAPN12-202ENST00000593700 HSPA1LP34931 641 aa19.84■□□□□ 0.77
CAPN12-202ENST00000593700 POLR3AO14802 1390 aaPredicted RBP19.83■□□□□ 0.77
CAPN12-202ENST00000593700 NPHP3Q7Z494 1330 aa19.83■□□□□ 0.77
CAPN12-202ENST00000593700 PHLPP1O60346 1717 aa19.83■□□□□ 0.77
CAPN12-202ENST00000593700 NUTM2FA1L443 756 aa19.83■□□□□ 0.77
CAPN12-202ENST00000593700 SPDYE4A6NLX3 237 aa19.83■□□□□ 0.77
CAPN12-202ENST00000593700 ESCO1Q5FWF5 840 aa19.83■□□□□ 0.77
CAPN12-202ENST00000593700 USP6P35125 1406 aa19.83■□□□□ 0.76
CAPN12-202ENST00000593700 NHSL1Q5SYE7 1610 aa19.83■□□□□ 0.76
CAPN12-202ENST00000593700 BRD4O60885 1362 aaPredicted RBP19.83■□□□□ 0.76
CAPN12-202ENST00000593700 USP54Q70EL1 1684 aa19.81■□□□□ 0.76
CAPN12-202ENST00000593700 NLRP13Q86W25 1043 aa19.81■□□□□ 0.76
CAPN12-202ENST00000593700 SPINK5Q9NQ38 1064 aaPredicted RBP19.81■□□□□ 0.76
CAPN12-202ENST00000593700 ACEP12821 1306 aa19.8■□□□□ 0.76
CAPN12-202ENST00000593700 NGDNQ8NEJ9 315 aaKnown RBP19.8■□□□□ 0.76
CAPN12-202ENST00000593700 ORAI2Q96SN7 254 aa19.8■□□□□ 0.76
CAPN12-202ENST00000593700 MKRN4PQ13434 485 aaPredicted RBP19.79■□□□□ 0.76
CAPN12-202ENST00000593700 MRS2Q9HD23 443 aa19.79■□□□□ 0.76
CAPN12-202ENST00000593700 PHF8Q9UPP1 1060 aa19.79■□□□□ 0.76
CAPN12-202ENST00000593700 MORC1Q86VD1 984 aa19.78■□□□□ 0.76
CAPN12-202ENST00000593700 LRRC59Q96AG4 307 aaKnown RBP19.78■□□□□ 0.76
CAPN12-202ENST00000593700 TTC21AQ8NDW8 1320 aa19.77■□□□□ 0.76
CAPN12-202ENST00000593700 COL16A1Q07092 1604 aaPredicted RBP19.77■□□□□ 0.76
CAPN12-202ENST00000593700 JCADQ9P266 1359 aa19.77■□□□□ 0.76
CAPN12-202ENST00000593700 MAP2P11137 1827 aaKnown RBP19.76■□□□□ 0.75
CAPN12-202ENST00000593700 PIK3C2AO00443 1686 aa19.76■□□□□ 0.75
CAPN12-202ENST00000593700 SOS2Q07890 1332 aaPredicted RBP19.76■□□□□ 0.75
CAPN12-202ENST00000593700 PSME1Q06323 249 aa19.75■□□□□ 0.75
CAPN12-202ENST00000593700 PMFBP1Q8TBY8 1022 aa19.75■□□□□ 0.75
CAPN12-202ENST00000593700 TRPM3Q9HCF6 1732 aaPredicted RBP19.74■□□□□ 0.75
CAPN12-202ENST00000593700 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.73■□□□□ 0.75
CAPN12-202ENST00000593700 FOXO3O43524 673 aa19.72■□□□□ 0.75
CAPN12-202ENST00000593700 PPP2R1AP30153 589 aa19.72■□□□□ 0.75
CAPN12-202ENST00000593700 SSH2Q76I76 1423 aa19.72■□□□□ 0.75
CAPN12-202ENST00000593700 TTC21BQ7Z4L5 1316 aa19.72■□□□□ 0.75
CAPN12-202ENST00000593700 SHPRHQ149N8 1683 aa19.71■□□□□ 0.75
CAPN12-202ENST00000593700 FYB1O15117 783 aa19.71■□□□□ 0.75
CAPN12-202ENST00000593700 CAPN15O75808 1086 aa19.71■□□□□ 0.75
CAPN12-202ENST00000593700 COG3Q96JB2 828 aa19.71■□□□□ 0.75
CAPN12-202ENST00000593700 GGNBP2Q9H3C7 697 aa19.71■□□□□ 0.75
CAPN12-202ENST00000593700 SPATA31A6Q5VVP1 1343 aa19.71■□□□□ 0.75
CAPN12-202ENST00000593700 MARF1Q9Y4F3 1742 aaKnown RBP19.71■□□□□ 0.75
CAPN12-202ENST00000593700 SBNO1A3KN83 1393 aa19.7■□□□□ 0.74
CAPN12-202ENST00000593700 PXDNQ92626 1479 aa19.7■□□□□ 0.74
CAPN12-202ENST00000593700 OVOS2A0A0J9YW53 1432 aa19.69■□□□□ 0.74
CAPN12-202ENST00000593700 OVOS2Q6IE36 1432 aa19.69■□□□□ 0.74
CAPN12-202ENST00000593700 KRT28Q7Z3Y7 464 aa19.69■□□□□ 0.74
CAPN12-202ENST00000593700 FBXO3Q9UK99 471 aa19.69■□□□□ 0.74
CAPN12-202ENST00000593700 RNF39Q9H2S5 420 aa19.68■□□□□ 0.74
CAPN12-202ENST00000593700 ALS2Q96Q42 1657 aa19.68■□□□□ 0.74
CAPN12-202ENST00000593700 POLA2Q14181 598 aa19.67■□□□□ 0.74
CAPN12-202ENST00000593700 CFAP53Q96M91 514 aa19.67■□□□□ 0.74
CAPN12-202ENST00000593700 ARHGEF10O15013 1369 aa19.67■□□□□ 0.74
CAPN12-202ENST00000593700 NME9Q86XW9 330 aa19.66■□□□□ 0.74
CAPN12-202ENST00000593700 DDX17Q92841 729 aaKnown RBP19.65■□□□□ 0.74
CAPN12-202ENST00000593700 AATKQ6ZMQ8 1374 aa19.65■□□□□ 0.74
CAPN12-202ENST00000593700 USP31Q70CQ4 1352 aa19.65■□□□□ 0.74
CAPN12-202ENST00000593700 TNS3Q68CZ2 1445 aa19.65■□□□□ 0.74
CAPN12-202ENST00000593700 LTN1O94822 1766 aa19.65■□□□□ 0.74
CAPN12-202ENST00000593700 TNNT2P45379 298 aaPredicted RBP19.64■□□□□ 0.73
CAPN12-202ENST00000593700 SPATA31A3Q5VYP0 1347 aa19.64■□□□□ 0.73
CAPN12-202ENST00000593700 PNPLA6Q8IY17 1366 aa19.64■□□□□ 0.73
CAPN12-202ENST00000593700 CDK12Q9NYV4 1490 aaPredicted RBP19.63■□□□□ 0.73
CAPN12-202ENST00000593700 SMG6Q86US8 1419 aaKnown RBP19.63■□□□□ 0.73
CAPN12-202ENST00000593700 CCDC184Q52MB2 194 aa19.63■□□□□ 0.73
CAPN12-202ENST00000593700 YTHDC1Q96MU7 727 aaKnown RBP19.63■□□□□ 0.73
CAPN12-202ENST00000593700 COL22A1Q8NFW1 1626 aaPredicted RBP19.62■□□□□ 0.73
CAPN12-202ENST00000593700 PAK3O75914 559 aaPredicted RBP19.62■□□□□ 0.73
CAPN12-202ENST00000593700 FAM9BQ8IZU0 186 aa19.62■□□□□ 0.73
CAPN12-202ENST00000593700 INSRP06213 1382 aa19.61■□□□□ 0.73
CAPN12-202ENST00000593700 WDR43Q15061 677 aaKnown RBP eCLIP19.61■□□□□ 0.73
CAPN12-202ENST00000593700 XPCQ01831 940 aaPredicted RBP19.6■□□□□ 0.73
CAPN12-202ENST00000593700 ABTB2Q8N961 1025 aa19.6■□□□□ 0.73
CAPN12-202ENST00000593700 PHRF1Q9P1Y6 1649 aaKnown RBP19.59■□□□□ 0.73
CAPN12-202ENST00000593700 MED1Q15648 1581 aaPredicted RBP19.58■□□□□ 0.73
CAPN12-202ENST00000593700 PNISRQ8TF01 805 aaKnown RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms