RNA–Protein interactions for RNA: ENST00000591075.1

NPC1-211, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-211ENST00000591075 LRP6O75581 1613 aa12.37□□□□□ -0.43
NPC1-211ENST00000591075 ANKARQ7Z5J8 1434 aa12.37□□□□□ -0.43
NPC1-211ENST00000591075 CENPJQ9HC77 1338 aaPredicted RBP12.37□□□□□ -0.43
NPC1-211ENST00000591075 PAK3O75914 559 aaPredicted RBP12.36□□□□□ -0.43
NPC1-211ENST00000591075 SRPK2P78362 688 aaKnown RBP12.36□□□□□ -0.43
NPC1-211ENST00000591075 FMN2Q9NZ56 1722 aa12.36□□□□□ -0.43
NPC1-211ENST00000591075 NUDT16Q96DE0 195 aaKnown RBP12.35□□□□□ -0.43
NPC1-211ENST00000591075 QTRT2Q9H974 415 aaKnown RBP12.35□□□□□ -0.43
NPC1-211ENST00000591075 KIF1AQ12756 1690 aa12.35□□□□□ -0.43
NPC1-211ENST00000591075 SPATA31A3Q5VYP0 1347 aa12.35□□□□□ -0.43
NPC1-211ENST00000591075 USP47Q96K76 1375 aa12.34□□□□□ -0.43
NPC1-211ENST00000591075 CDCA8Q53HL2 280 aa12.34□□□□□ -0.43
NPC1-211ENST00000591075 USP21Q9UK80 565 aa12.34□□□□□ -0.43
NPC1-211ENST00000591075 PXDNQ92626 1479 aa12.34□□□□□ -0.43
NPC1-211ENST00000591075 ARHGEF10O15013 1369 aa12.33□□□□□ -0.44
NPC1-211ENST00000591075 HSPA5P11021 654 aaKnown RBP12.33□□□□□ -0.44
NPC1-211ENST00000591075 FXR2P51116 673 aaKnown RBP eCLIP12.33□□□□□ -0.44
NPC1-211ENST00000591075 REM2Q8IYK8 340 aaPredicted RBP12.33□□□□□ -0.44
NPC1-211ENST00000591075 SBNO1A3KN83 1393 aa12.32□□□□□ -0.44
NPC1-211ENST00000591075 CCDC61Q9Y6R9 512 aa12.32□□□□□ -0.44
NPC1-211ENST00000591075 TULP4Q9NRJ4 1543 aa12.32□□□□□ -0.44
NPC1-211ENST00000591075 ADGRB2O60241 1585 aa12.31□□□□□ -0.44
NPC1-211ENST00000591075 TNS3Q68CZ2 1445 aa12.31□□□□□ -0.44
NPC1-211ENST00000591075 RBM6P78332 1123 aaKnown RBP12.31□□□□□ -0.44
NPC1-211ENST00000591075 PUS7Q96PZ0 661 aaKnown RBP12.31□□□□□ -0.44
NPC1-211ENST00000591075 TRPC5Q9UL62 973 aaPredicted RBP12.31□□□□□ -0.44
NPC1-211ENST00000591075 EVC2Q86UK5 1308 aa12.31□□□□□ -0.44
NPC1-211ENST00000591075 PRR36Q9H6K5 1346 aa12.31□□□□□ -0.44
NPC1-211ENST00000591075 CABLES1Q8TDN4 633 aa12.3□□□□□ -0.44
NPC1-211ENST00000591075 CABP2Q9NPB3 220 aa12.3□□□□□ -0.44
NPC1-211ENST00000591075 SBNO2Q9Y2G9 1366 aa12.3□□□□□ -0.44
NPC1-211ENST00000591075 ARHGEF28Q8N1W1 1705 aaKnown RBP12.29□□□□□ -0.44
NPC1-211ENST00000591075 RGPD8O14715 1765 aaPredicted RBP12.29□□□□□ -0.44
NPC1-211ENST00000591075 TMF1P82094 1093 aa12.29□□□□□ -0.44
NPC1-211ENST00000591075 POLA2Q14181 598 aa12.29□□□□□ -0.44
NPC1-211ENST00000591075 ST20-MTHFSA0A0A6YYL1 179 aa12.28□□□□□ -0.44
NPC1-211ENST00000591075 FNBP4Q8N3X1 1017 aaPredicted RBP12.28□□□□□ -0.44
NPC1-211ENST00000591075 CCDC9Q9Y3X0 531 aaKnown RBP12.28□□□□□ -0.44
NPC1-211ENST00000591075 ACEP12821 1306 aa12.27□□□□□ -0.45
NPC1-211ENST00000591075 PLEKHG3A1L390 1219 aa12.26□□□□□ -0.45
NPC1-211ENST00000591075 SAMD1Q6SPF0 538 aaPredicted RBP12.26□□□□□ -0.45
NPC1-211ENST00000591075 COL22A1Q8NFW1 1626 aaPredicted RBP12.26□□□□□ -0.45
NPC1-211ENST00000591075 NUTM2GQ5VZR2 741 aa12.25□□□□□ -0.45
NPC1-211ENST00000591075 UNC5CLQ8IV45 518 aa12.25□□□□□ -0.45
NPC1-211ENST00000591075 ABTB2Q8N961 1025 aa12.25□□□□□ -0.45
NPC1-211ENST00000591075 CABP1Q9NZU7 370 aa12.25□□□□□ -0.45
NPC1-211ENST00000591075 ATP7BP35670 1465 aa12.25□□□□□ -0.45
NPC1-211ENST00000591075 PPIP5K1Q6PFW1 1433 aa12.24□□□□□ -0.45
NPC1-211ENST00000591075 USP32Q8NFA0 1604 aa12.24□□□□□ -0.45
NPC1-211ENST00000591075 ITSN1Q15811 1721 aa12.23□□□□□ -0.45
NPC1-211ENST00000591075 TESK2Q96S53 571 aa12.23□□□□□ -0.45
NPC1-211ENST00000591075 PRDM11Q9NQV5 511 aa12.23□□□□□ -0.45
NPC1-211ENST00000591075 A0A0G2JS52 829 aa12.22□□□□□ -0.45
NPC1-211ENST00000591075 PITPNM1O00562 1244 aa12.22□□□□□ -0.45
NPC1-211ENST00000591075 MYT1Q01538 1121 aa12.22□□□□□ -0.45
NPC1-211ENST00000591075 NLRP13Q86W25 1043 aa12.22□□□□□ -0.45
NPC1-211ENST00000591075 TMC1Q8TDI8 760 aa12.22□□□□□ -0.45
NPC1-211ENST00000591075 GJD4Q96KN9 370 aaPredicted RBP12.22□□□□□ -0.45
NPC1-211ENST00000591075 CDK12Q9NYV4 1490 aaPredicted RBP12.21□□□□□ -0.45
NPC1-211ENST00000591075 POLR3AO14802 1390 aaPredicted RBP12.21□□□□□ -0.45
NPC1-211ENST00000591075 FAM83GA6ND36 823 aa12.21□□□□□ -0.45
NPC1-211ENST00000591075 ZNF692Q9BU19 519 aaPredicted RBP12.21□□□□□ -0.45
NPC1-211ENST00000591075 BTG4Q9NY30 223 aa12.21□□□□□ -0.45
NPC1-211ENST00000591075 QRICH2Q9H0J4 1663 aa12.21□□□□□ -0.45
NPC1-211ENST00000591075 ATRNO75882 1429 aa12.2□□□□□ -0.46
NPC1-211ENST00000591075 ATAD2Q6PL18 1390 aa12.2□□□□□ -0.46
NPC1-211ENST00000591075 CCDC7Q96M83 1385 aa12.2□□□□□ -0.46
NPC1-211ENST00000591075 ZBTB7CA1YPR0 619 aa12.2□□□□□ -0.46
NPC1-211ENST00000591075 ZC3H6P61129 1189 aaKnown RBP12.2□□□□□ -0.46
NPC1-211ENST00000591075 DIEXFQ68CQ4 756 aaKnown RBP12.2□□□□□ -0.46
NPC1-211ENST00000591075 BRD4O60885 1362 aaPredicted RBP12.19□□□□□ -0.46
NPC1-211ENST00000591075 EVA1CP58658 441 aa12.19□□□□□ -0.46
NPC1-211ENST00000591075 NLRP6P59044 892 aa12.19□□□□□ -0.46
NPC1-211ENST00000591075 BCL9LQ86UU0 1499 aa12.19□□□□□ -0.46
NPC1-211ENST00000591075 KIF7Q2M1P5 1343 aa12.18□□□□□ -0.46
NPC1-211ENST00000591075 WASHC2AQ641Q2 1341 aa12.18□□□□□ -0.46
NPC1-211ENST00000591075 VPS72Q15906 364 aa12.18□□□□□ -0.46
NPC1-211ENST00000591075 HDGFL2Q7Z4V5 671 aaPredicted RBP12.18□□□□□ -0.46
NPC1-211ENST00000591075 NINLQ9Y2I6 1382 aa12.18□□□□□ -0.46
NPC1-211ENST00000591075 SLIT2O94813 1529 aa12.17□□□□□ -0.46
NPC1-211ENST00000591075 CHRNA2Q15822 529 aa12.17□□□□□ -0.46
NPC1-211ENST00000591075 UPF1Q92900 1129 aaKnown RBP eCLIP12.17□□□□□ -0.46
NPC1-211ENST00000591075 RGS12O14924 1447 aa12.17□□□□□ -0.46
NPC1-211ENST00000591075 MARF1Q9Y4F3 1742 aaKnown RBP12.17□□□□□ -0.46
NPC1-211ENST00000591075 STRN4Q9NRL3 753 aa12.16□□□□□ -0.46
NPC1-211ENST00000591075 TERF2IPQ9NYB0 399 aa12.16□□□□□ -0.46
NPC1-211ENST00000591075 TRPM3Q9HCF6 1732 aaPredicted RBP12.16□□□□□ -0.46
NPC1-211ENST00000591075 KIAA0232Q92628 1395 aa12.16□□□□□ -0.46
NPC1-211ENST00000591075 GCP02774 474 aa12.15□□□□□ -0.46
NPC1-211ENST00000591075 SEPT12Q8IYM1 358 aa12.15□□□□□ -0.46
NPC1-211ENST00000591075 KTN1Q86UP2 1357 aaKnown RBP12.15□□□□□ -0.46
NPC1-211ENST00000591075 USP6P35125 1406 aa12.14□□□□□ -0.47
NPC1-211ENST00000591075 TOPAZ1Q8N9V7 1692 aa12.14□□□□□ -0.47
NPC1-211ENST00000591075 ALS2Q96Q42 1657 aa12.14□□□□□ -0.47
NPC1-211ENST00000591075 DDX10Q13206 875 aaKnown RBP12.14□□□□□ -0.47
NPC1-211ENST00000591075 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.14□□□□□ -0.47
NPC1-211ENST00000591075 TTC21BQ7Z4L5 1316 aa12.13□□□□□ -0.47
NPC1-211ENST00000591075 TTC21AQ8NDW8 1320 aa12.13□□□□□ -0.47
NPC1-211ENST00000591075 C11orf95C9JLR9 678 aaPredicted RBP12.13□□□□□ -0.47
NPC1-211ENST00000591075 SOX12O15370 315 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms