RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 CERKQ8TCT0 537 aa26.02■■□□□ 1.76
SPHK1-207ENST00000590959 SLAIN2Q9P270 581 aa26.02■■□□□ 1.76
SPHK1-207ENST00000590959 CPSF1Q10570 1443 aaKnown RBP26■■□□□ 1.75
SPHK1-207ENST00000590959 PLEKHG3A1L390 1219 aa25.98■■□□□ 1.75
SPHK1-207ENST00000590959 ACEP12821 1306 aa25.97■■□□□ 1.75
SPHK1-207ENST00000590959 PHF8Q9UPP1 1060 aa25.97■■□□□ 1.75
SPHK1-207ENST00000590959 ITSN1Q15811 1721 aa25.96■■□□□ 1.75
SPHK1-207ENST00000590959 ZBED9Q6R2W3 1325 aa25.96■■□□□ 1.75
SPHK1-207ENST00000590959 FYB1O15117 783 aa25.96■■□□□ 1.75
SPHK1-207ENST00000590959 ZNF692Q9BU19 519 aaPredicted RBP25.96■■□□□ 1.75
SPHK1-207ENST00000590959 DDX17Q92841 729 aaKnown RBP25.95■■□□□ 1.74
SPHK1-207ENST00000590959 INSRP06213 1382 aa25.95■■□□□ 1.74
SPHK1-207ENST00000590959 EDC4Q6P2E9 1401 aaKnown RBP25.94■■□□□ 1.74
SPHK1-207ENST00000590959 ERICH6BQ5W0A0 696 aa25.94■■□□□ 1.74
SPHK1-207ENST00000590959 BRINP3Q76B58 766 aa25.94■■□□□ 1.74
SPHK1-207ENST00000590959 GGNBP2Q9H3C7 697 aa25.94■■□□□ 1.74
SPHK1-207ENST00000590959 FOXO3O43524 673 aa25.94■■□□□ 1.74
SPHK1-207ENST00000590959 TNNT2P45379 298 aaPredicted RBP25.94■■□□□ 1.74
SPHK1-207ENST00000590959 NGDNQ8NEJ9 315 aaKnown RBP25.92■■□□□ 1.74
SPHK1-207ENST00000590959 POLR3AO14802 1390 aaPredicted RBP25.92■■□□□ 1.74
SPHK1-207ENST00000590959 WDR43Q15061 677 aaKnown RBP eCLIP25.91■■□□□ 1.74
SPHK1-207ENST00000590959 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.9■■□□□ 1.74
SPHK1-207ENST00000590959 IQSEC2Q5JU85 1478 aa25.9■■□□□ 1.74
SPHK1-207ENST00000590959 UBAP1LF5GYI3 381 aa25.89■■□□□ 1.74
SPHK1-207ENST00000590959 XPCQ01831 940 aaPredicted RBP25.89■■□□□ 1.74
SPHK1-207ENST00000590959 ANKRD26Q9UPS8 1709 aa25.89■■□□□ 1.74
SPHK1-207ENST00000590959 AKAP12Q02952 1782 aa25.89■■□□□ 1.73
SPHK1-207ENST00000590959 TOM1O60784 492 aa25.89■■□□□ 1.73
SPHK1-207ENST00000590959 MON2Q7Z3U7 1717 aa25.88■■□□□ 1.73
SPHK1-207ENST00000590959 KIF20BQ96Q89 1820 aa25.88■■□□□ 1.73
SPHK1-207ENST00000590959 PIP4K2BP78356 416 aa25.87■■□□□ 1.73
SPHK1-207ENST00000590959 ANP32EQ9BTT0 268 aa25.87■■□□□ 1.73
SPHK1-207ENST00000590959 ADAMTS8Q9UP79 889 aa25.86■■□□□ 1.73
SPHK1-207ENST00000590959 MTHFSP49914 203 aa25.85■■□□□ 1.73
SPHK1-207ENST00000590959 USP6P35125 1406 aa25.85■■□□□ 1.73
SPHK1-207ENST00000590959 BLMP54132 1417 aaPredicted RBP25.85■■□□□ 1.73
SPHK1-207ENST00000590959 PSME1Q06323 249 aa25.84■■□□□ 1.73
SPHK1-207ENST00000590959 CFAP53Q96M91 514 aa25.84■■□□□ 1.73
SPHK1-207ENST00000590959 KIF1AQ12756 1690 aa25.84■■□□□ 1.73
SPHK1-207ENST00000590959 ROBO1Q9Y6N7 1651 aa25.84■■□□□ 1.73
SPHK1-207ENST00000590959 SSH2Q76I76 1423 aa25.82■■□□□ 1.72
SPHK1-207ENST00000590959 NME9Q86XW9 330 aa25.81■■□□□ 1.72
SPHK1-207ENST00000590959 KRT28Q7Z3Y7 464 aa25.81■■□□□ 1.72
SPHK1-207ENST00000590959 NRKQ7Z2Y5 1582 aa25.79■■□□□ 1.72
SPHK1-207ENST00000590959 NPHP3Q7Z494 1330 aa25.79■■□□□ 1.72
SPHK1-207ENST00000590959 TTC21BQ7Z4L5 1316 aa25.79■■□□□ 1.72
SPHK1-207ENST00000590959 COG3Q96JB2 828 aa25.78■■□□□ 1.72
SPHK1-207ENST00000590959 ZRANB1Q9UGI0 708 aa25.78■■□□□ 1.72
SPHK1-207ENST00000590959 PAK3O75914 559 aaPredicted RBP25.77■■□□□ 1.72
SPHK1-207ENST00000590959 PXDNQ92626 1479 aa25.76■■□□□ 1.71
SPHK1-207ENST00000590959 TRPM3Q9HCF6 1732 aaPredicted RBP25.74■■□□□ 1.71
SPHK1-207ENST00000590959 NHSL1Q5SYE7 1610 aa25.74■■□□□ 1.71
SPHK1-207ENST00000590959 SENP3-EIF4A1A0A087X0R7 540 aa25.74■■□□□ 1.71
SPHK1-207ENST00000590959 SOS2Q07890 1332 aaPredicted RBP25.74■■□□□ 1.71
SPHK1-207ENST00000590959 TTC21AQ8NDW8 1320 aa25.74■■□□□ 1.71
SPHK1-207ENST00000590959 NUTM2GQ5VZR2 741 aa25.72■■□□□ 1.71
SPHK1-207ENST00000590959 SHPRHQ149N8 1683 aa25.72■■□□□ 1.71
SPHK1-207ENST00000590959 AATKQ6ZMQ8 1374 aa25.71■■□□□ 1.71
SPHK1-207ENST00000590959 ABTB2Q8N961 1025 aa25.7■■□□□ 1.7
SPHK1-207ENST00000590959 RBM19Q9Y4C8 960 aaKnown RBP25.7■■□□□ 1.7
SPHK1-207ENST00000590959 PIK3C2AO00443 1686 aa25.69■■□□□ 1.7
SPHK1-207ENST00000590959 POLKQ9UBT6 870 aa25.69■■□□□ 1.7
SPHK1-207ENST00000590959 AHDC1Q5TGY3 1603 aaPredicted RBP25.68■■□□□ 1.7
SPHK1-207ENST00000590959 LMOD2Q6P5Q4 547 aa25.68■■□□□ 1.7
SPHK1-207ENST00000590959 SALL2Q9Y467 1007 aaPredicted RBP25.68■■□□□ 1.7
SPHK1-207ENST00000590959 PNPLA6Q8IY17 1366 aa25.68■■□□□ 1.7
SPHK1-207ENST00000590959 NUDCQ9Y266 331 aa25.68■■□□□ 1.7
SPHK1-207ENST00000590959 OVOS2A0A0J9YW53 1432 aa25.68■■□□□ 1.7
SPHK1-207ENST00000590959 OVOS2Q6IE36 1432 aa25.68■■□□□ 1.7
SPHK1-207ENST00000590959 SPATA31A3Q5VYP0 1347 aa25.67■■□□□ 1.7
SPHK1-207ENST00000590959 COL3A1P02461 1466 aaPredicted RBP25.67■■□□□ 1.7
SPHK1-207ENST00000590959 SBNO1A3KN83 1393 aa25.66■■□□□ 1.7
SPHK1-207ENST00000590959 PLEKHG5O94827 1062 aa25.66■■□□□ 1.7
SPHK1-207ENST00000590959 PDE3BQ13370 1112 aa25.66■■□□□ 1.7
SPHK1-207ENST00000590959 CCDC146Q8IYE0 955 aa25.66■■□□□ 1.7
SPHK1-207ENST00000590959 ALS2Q96Q42 1657 aa25.66■■□□□ 1.7
SPHK1-207ENST00000590959 NLRP6P59044 892 aa25.66■■□□□ 1.7
SPHK1-207ENST00000590959 SMG6Q86US8 1419 aaKnown RBP25.65■■□□□ 1.7
SPHK1-207ENST00000590959 FBLN1P23142 703 aa25.65■■□□□ 1.7
SPHK1-207ENST00000590959 PHLPP1O60346 1717 aa25.64■■□□□ 1.7
SPHK1-207ENST00000590959 TNS3Q68CZ2 1445 aa25.64■■□□□ 1.69
SPHK1-207ENST00000590959 PPM1GO15355 546 aaPredicted RBP25.64■■□□□ 1.69
SPHK1-207ENST00000590959 DIAPH1O60610 1272 aaKnown RBP25.63■■□□□ 1.69
SPHK1-207ENST00000590959 MARF1Q9Y4F3 1742 aaKnown RBP25.63■■□□□ 1.69
SPHK1-207ENST00000590959 USP31Q70CQ4 1352 aa25.63■■□□□ 1.69
SPHK1-207ENST00000590959 U2AF1L5P0DN76 240 aaPredicted RBP25.62■■□□□ 1.69
SPHK1-207ENST00000590959 U2AF1Q01081 240 aaKnown RBP eCLIP25.62■■□□□ 1.69
SPHK1-207ENST00000590959 EMILIN1Q9Y6C2 1016 aa25.62■■□□□ 1.69
SPHK1-207ENST00000590959 COL16A1Q07092 1604 aaPredicted RBP25.62■■□□□ 1.69
SPHK1-207ENST00000590959 MAP2P11137 1827 aaKnown RBP25.61■■□□□ 1.69
SPHK1-207ENST00000590959 NGEFQ8N5V2 710 aa25.61■■□□□ 1.69
SPHK1-207ENST00000590959 CDK12Q9NYV4 1490 aaPredicted RBP25.6■■□□□ 1.69
SPHK1-207ENST00000590959 APAF1O14727 1248 aa25.6■■□□□ 1.69
SPHK1-207ENST00000590959 CABLES1Q8TDN4 633 aa25.6■■□□□ 1.69
SPHK1-207ENST00000590959 RUNDC1Q96C34 613 aa25.6■■□□□ 1.69
SPHK1-207ENST00000590959 PPP4R2Q9NY27 417 aa25.6■■□□□ 1.69
SPHK1-207ENST00000590959 U2SURPO15042 1029 aaKnown RBP25.59■■□□□ 1.69
SPHK1-207ENST00000590959 SOX12O15370 315 aa25.59■■□□□ 1.69
SPHK1-207ENST00000590959 LRRC59Q96AG4 307 aaKnown RBP25.59■■□□□ 1.69
SPHK1-207ENST00000590959 RRS1Q15050 365 aaKnown RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms