RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 SMC5Q8IY18 1101 aa15.72■□□□□ 0.11
PDE4A-207ENST00000590407 ZNF428Q96B54 188 aa15.72■□□□□ 0.11
PDE4A-207ENST00000590407 BCL2L13Q9BXK5 485 aa15.72■□□□□ 0.11
PDE4A-207ENST00000590407 CABP2Q9NPB3 220 aa15.72■□□□□ 0.11
PDE4A-207ENST00000590407 BRPF3Q9ULD4 1205 aa15.72■□□□□ 0.11
PDE4A-207ENST00000590407 ATF7IPQ6VMQ6 1270 aa15.71■□□□□ 0.11
PDE4A-207ENST00000590407 TBC1D2Q9BYX2 928 aa15.71■□□□□ 0.11
PDE4A-207ENST00000590407 PPIP5K1Q6PFW1 1433 aa15.71■□□□□ 0.11
PDE4A-207ENST00000590407 RICTORQ6R327 1708 aa15.7■□□□□ 0.1
PDE4A-207ENST00000590407 KIF16BQ96L93 1317 aa15.7■□□□□ 0.1
PDE4A-207ENST00000590407 TRIM27P14373 513 aa15.7■□□□□ 0.1
PDE4A-207ENST00000590407 ALDH1L2Q3SY69 923 aa15.7■□□□□ 0.1
PDE4A-207ENST00000590407 SMC4Q9NTJ3 1288 aa15.7■□□□□ 0.1
PDE4A-207ENST00000590407 PREX1Q8TCU6 1659 aa15.7■□□□□ 0.1
PDE4A-207ENST00000590407 EXOSC9Q06265 439 aaKnown RBP15.7■□□□□ 0.1
PDE4A-207ENST00000590407 IDI1Q13907 227 aa15.7■□□□□ 0.1
PDE4A-207ENST00000590407 YTHDC2Q9H6S0 1430 aaKnown RBP15.69■□□□□ 0.1
PDE4A-207ENST00000590407 FYB1O15117 783 aa15.69■□□□□ 0.1
PDE4A-207ENST00000590407 IPO8O15397 1037 aaKnown RBP15.69■□□□□ 0.1
PDE4A-207ENST00000590407 SSH1Q8WYL5 1049 aa15.69■□□□□ 0.1
PDE4A-207ENST00000590407 ARHGEF40Q8TER5 1519 aa15.68■□□□□ 0.1
PDE4A-207ENST00000590407 KIF20BQ96Q89 1820 aa15.68■□□□□ 0.1
PDE4A-207ENST00000590407 DLC1Q96QB1 1528 aa15.67■□□□□ 0.1
PDE4A-207ENST00000590407 TSR2Q969E8 191 aaKnown RBP15.67■□□□□ 0.1
PDE4A-207ENST00000590407 ZBTB40Q9NUA8 1239 aa15.67■□□□□ 0.1
PDE4A-207ENST00000590407 DIAPH1O60610 1272 aaKnown RBP15.66■□□□□ 0.1
PDE4A-207ENST00000590407 FCHSD2O94868 740 aa15.66■□□□□ 0.1
PDE4A-207ENST00000590407 SRPK2P78362 688 aaKnown RBP15.66■□□□□ 0.1
PDE4A-207ENST00000590407 L1TD1Q5T7N2 865 aaKnown RBP15.66■□□□□ 0.1
PDE4A-207ENST00000590407 MYO5BQ9ULV0 1848 aa15.66■□□□□ 0.1
PDE4A-207ENST00000590407 HDGFL2Q7Z4V5 671 aaPredicted RBP15.65■□□□□ 0.1
PDE4A-207ENST00000590407 ATP7BP35670 1465 aa15.65■□□□□ 0.1
PDE4A-207ENST00000590407 PIK3R4Q99570 1358 aa15.65■□□□□ 0.1
PDE4A-207ENST00000590407 ALKQ9UM73 1620 aa15.65■□□□□ 0.1
PDE4A-207ENST00000590407 U2SURPO15042 1029 aaKnown RBP15.64■□□□□ 0.1
PDE4A-207ENST00000590407 FAM43AQ8N2R8 423 aa15.64■□□□□ 0.1
PDE4A-207ENST00000590407 C22orf23Q9BZE7 217 aa15.64■□□□□ 0.1
PDE4A-207ENST00000590407 GGNBP2Q9H3C7 697 aa15.64■□□□□ 0.1
PDE4A-207ENST00000590407 FAM135BQ49AJ0 1406 aa15.64■□□□□ 0.09
PDE4A-207ENST00000590407 CHMP4BQ9H444 224 aaKnown RBP15.64■□□□□ 0.09
PDE4A-207ENST00000590407 NOB1Q9ULX3 412 aaKnown RBP15.64■□□□□ 0.09
PDE4A-207ENST00000590407 RIPK4P57078 832 aa15.63■□□□□ 0.09
PDE4A-207ENST00000590407 NUCB1Q02818 461 aa15.63■□□□□ 0.09
PDE4A-207ENST00000590407 ITPRIPQ8IWB1 547 aa15.63■□□□□ 0.09
PDE4A-207ENST00000590407 SLKQ9H2G2 1235 aaPredicted RBP15.63■□□□□ 0.09
PDE4A-207ENST00000590407 CHMP5Q9NZZ3 219 aa15.63■□□□□ 0.09
PDE4A-207ENST00000590407 POGKQ9P215 609 aa15.63■□□□□ 0.09
PDE4A-207ENST00000590407 NCOA3Q9Y6Q9 1424 aa15.63■□□□□ 0.09
PDE4A-207ENST00000590407 REREQ9P2R6 1566 aa15.62■□□□□ 0.09
PDE4A-207ENST00000590407 ARHGAP45Q92619 1136 aa15.62■□□□□ 0.09
PDE4A-207ENST00000590407 LRRC7Q96NW7 1537 aa15.62■□□□□ 0.09
PDE4A-207ENST00000590407 RBM25P49756 843 aaKnown RBP15.62■□□□□ 0.09
PDE4A-207ENST00000590407 TMEM57Q8N5G2 664 aa15.62■□□□□ 0.09
PDE4A-207ENST00000590407 PRAM1Q96QH2 718 aa15.62■□□□□ 0.09
PDE4A-207ENST00000590407 RTN4Q9NQC3 1192 aaKnown RBP15.62■□□□□ 0.09
PDE4A-207ENST00000590407 PTCH1Q13635 1447 aa15.61■□□□□ 0.09
PDE4A-207ENST00000590407 RAPGEF3O95398 923 aa15.61■□□□□ 0.09
PDE4A-207ENST00000590407 CALD1Q05682 793 aaKnown RBP15.61■□□□□ 0.09
PDE4A-207ENST00000590407 SNX21Q969T3 373 aa15.61■□□□□ 0.09
PDE4A-207ENST00000590407 MCM4P33991 863 aa15.6■□□□□ 0.09
PDE4A-207ENST00000590407 NUTM2DQ5VT03 806 aaPredicted RBP15.6■□□□□ 0.09
PDE4A-207ENST00000590407 RSPH6AQ9H0K4 717 aa15.6■□□□□ 0.09
PDE4A-207ENST00000590407 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
PDE4A-207ENST00000590407 STK26Q9P289 416 aa15.59■□□□□ 0.09
PDE4A-207ENST00000590407 MINK1Q8N4C8 1332 aaPredicted RBP15.59■□□□□ 0.09
PDE4A-207ENST00000590407 YEATS2Q9ULM3 1422 aa15.59■□□□□ 0.09
PDE4A-207ENST00000590407 FSD2A1L4K1 749 aa15.58■□□□□ 0.08
PDE4A-207ENST00000590407 SAFB2Q14151 953 aaKnown RBP eCLIP15.58■□□□□ 0.08
PDE4A-207ENST00000590407 CDK19Q9BWU1 502 aa15.58■□□□□ 0.08
PDE4A-207ENST00000590407 PPP6R1Q9UPN7 881 aa15.58■□□□□ 0.08
PDE4A-207ENST00000590407 DDIT3P35638 169 aa15.57■□□□□ 0.08
PDE4A-207ENST00000590407 BMP2KLQ5H9B9 411 aa15.57■□□□□ 0.08
PDE4A-207ENST00000590407 GCC1Q96CN9 775 aa15.57■□□□□ 0.08
PDE4A-207ENST00000590407 MFAP1P55081 439 aaKnown RBP15.57■□□□□ 0.08
PDE4A-207ENST00000590407 NFE2L2Q16236 605 aa15.57■□□□□ 0.08
PDE4A-207ENST00000590407 CHD1LQ86WJ1 897 aa15.57■□□□□ 0.08
PDE4A-207ENST00000590407 ZNF692Q9BU19 519 aaPredicted RBP15.57■□□□□ 0.08
PDE4A-207ENST00000590407 CIZ1Q9ULV3 898 aaPredicted RBP15.57■□□□□ 0.08
PDE4A-207ENST00000590407 SETD1AO15047 1707 aaKnown RBP15.56■□□□□ 0.08
PDE4A-207ENST00000590407 CDK12Q9NYV4 1490 aaPredicted RBP15.56■□□□□ 0.08
PDE4A-207ENST00000590407 KIF24Q5T7B8 1368 aa15.56■□□□□ 0.08
PDE4A-207ENST00000590407 AATKQ6ZMQ8 1374 aa15.56■□□□□ 0.08
PDE4A-207ENST00000590407 HSCBQ8IWL3 235 aa15.56■□□□□ 0.08
PDE4A-207ENST00000590407 ISY1Q9ULR0 285 aaKnown RBP15.56■□□□□ 0.08
PDE4A-207ENST00000590407 AGLP35573 1532 aa15.55■□□□□ 0.08
PDE4A-207ENST00000590407 EIF5BO60841 1220 aaKnown RBP15.55■□□□□ 0.08
PDE4A-207ENST00000590407 IFT57Q9NWB7 429 aa15.55■□□□□ 0.08
PDE4A-207ENST00000590407 POLKQ9UBT6 870 aa15.55■□□□□ 0.08
PDE4A-207ENST00000590407 CPSF1Q10570 1443 aaKnown RBP15.55■□□□□ 0.08
PDE4A-207ENST00000590407 EDC4Q6P2E9 1401 aaKnown RBP15.55■□□□□ 0.08
PDE4A-207ENST00000590407 DDX11L8A8MPP1 907 aa15.54■□□□□ 0.08
PDE4A-207ENST00000590407 ZNF853P0CG23 659 aa15.54■□□□□ 0.08
PDE4A-207ENST00000590407 ZBTB7BO15156 539 aaPredicted RBP15.54■□□□□ 0.08
PDE4A-207ENST00000590407 PRKAR2BP31323 418 aa15.54■□□□□ 0.08
PDE4A-207ENST00000590407 GNAI1P63096 354 aa15.54■□□□□ 0.08
PDE4A-207ENST00000590407 MRPL50Q8N5N7 158 aaKnown RBP15.54■□□□□ 0.08
PDE4A-207ENST00000590407 ANO8Q9HCE9 1232 aaPredicted RBP15.54■□□□□ 0.08
PDE4A-207ENST00000590407 CABP1Q9NZU7 370 aa15.54■□□□□ 0.08
PDE4A-207ENST00000590407 RIMBP3CA6NJZ7 1639 aa15.53■□□□□ 0.08
PDE4A-207ENST00000590407 RIMBP3BA6NNM3 1639 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms