RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 DDX17Q92841 729 aaKnown RBP14.83□□□□□ -0.04
SDF2-208ENST00000589788 MINK1Q8N4C8 1332 aaPredicted RBP14.82□□□□□ -0.04
SDF2-208ENST00000589788 HIRIP3Q9BW71 556 aaPredicted RBP14.82□□□□□ -0.04
SDF2-208ENST00000589788 ADGRB2O60241 1585 aa14.82□□□□□ -0.04
SDF2-208ENST00000589788 TRPM1Q7Z4N2 1603 aa14.81□□□□□ -0.04
SDF2-208ENST00000589788 LRRC59Q96AG4 307 aaKnown RBP14.81□□□□□ -0.04
SDF2-208ENST00000589788 VSIG10Q8N0Z9 540 aa14.8□□□□□ -0.04
SDF2-208ENST00000589788 SPRYD3Q8NCJ5 442 aa14.8□□□□□ -0.04
SDF2-208ENST00000589788 NPHP3Q7Z494 1330 aa14.8□□□□□ -0.04
SDF2-208ENST00000589788 SHPRHQ149N8 1683 aa14.8□□□□□ -0.04
SDF2-208ENST00000589788 ROCK2O75116 1388 aaKnown RBP14.79□□□□□ -0.04
SDF2-208ENST00000589788 EIF3AQ14152 1382 aaKnown RBP14.79□□□□□ -0.04
SDF2-208ENST00000589788 RGPD8O14715 1765 aaPredicted RBP14.79□□□□□ -0.04
SDF2-208ENST00000589788 KIF1AQ12756 1690 aa14.79□□□□□ -0.04
SDF2-208ENST00000589788 FOXO3O43524 673 aa14.78□□□□□ -0.04
SDF2-208ENST00000589788 FARP1Q9Y4F1 1045 aaPredicted RBP14.78□□□□□ -0.04
SDF2-208ENST00000589788 SPATA31A6Q5VVP1 1343 aa14.78□□□□□ -0.04
SDF2-208ENST00000589788 ANKARQ7Z5J8 1434 aa14.77□□□□□ -0.04
SDF2-208ENST00000589788 WASLO00401 505 aaPredicted RBP14.77□□□□□ -0.04
SDF2-208ENST00000589788 NBPF8Q3BBV2 869 aa14.77□□□□□ -0.04
SDF2-208ENST00000589788 PHF8Q9UPP1 1060 aa14.77□□□□□ -0.04
SDF2-208ENST00000589788 SOS2Q07890 1332 aaPredicted RBP14.77□□□□□ -0.05
SDF2-208ENST00000589788 CENPJQ9HC77 1338 aaPredicted RBP14.76□□□□□ -0.05
SDF2-208ENST00000589788 TULP4Q9NRJ4 1543 aa14.75□□□□□ -0.05
SDF2-208ENST00000589788 NUTM2BA6NNL0 878 aaPredicted RBP14.75□□□□□ -0.05
SDF2-208ENST00000589788 NUTM2EB1AL46 878 aaPredicted RBP14.75□□□□□ -0.05
SDF2-208ENST00000589788 PYGBP11216 843 aa14.75□□□□□ -0.05
SDF2-208ENST00000589788 XPCQ01831 940 aaPredicted RBP14.75□□□□□ -0.05
SDF2-208ENST00000589788 NKX1-1Q15270 411 aaPredicted RBP14.75□□□□□ -0.05
SDF2-208ENST00000589788 NUTM2AQ8IVF1 878 aaPredicted RBP14.75□□□□□ -0.05
SDF2-208ENST00000589788 CLSPNQ9HAW4 1339 aa14.75□□□□□ -0.05
SDF2-208ENST00000589788 USP32Q8NFA0 1604 aa14.75□□□□□ -0.05
SDF2-208ENST00000589788 QRICH2Q9H0J4 1663 aa14.74□□□□□ -0.05
SDF2-208ENST00000589788 FXR2P51116 673 aaKnown RBP eCLIP14.74□□□□□ -0.05
SDF2-208ENST00000589788 MEX3CQ5U5Q3 659 aaKnown RBP14.74□□□□□ -0.05
SDF2-208ENST00000589788 PNPLA6Q8IY17 1366 aa14.74□□□□□ -0.05
SDF2-208ENST00000589788 PXDNQ92626 1479 aa14.74□□□□□ -0.05
SDF2-208ENST00000589788 CCER1Q8TC90 406 aaPredicted RBP14.73□□□□□ -0.05
SDF2-208ENST00000589788 CDK19Q9BWU1 502 aa14.73□□□□□ -0.05
SDF2-208ENST00000589788 PRKAR2AP13861 404 aaKnown RBP14.72□□□□□ -0.05
SDF2-208ENST00000589788 ITSN1Q15811 1721 aa14.72□□□□□ -0.05
SDF2-208ENST00000589788 KRT28Q7Z3Y7 464 aa14.72□□□□□ -0.05
SDF2-208ENST00000589788 LRP6O75581 1613 aa14.72□□□□□ -0.05
SDF2-208ENST00000589788 RALGAPBQ86X10 1494 aa14.71□□□□□ -0.05
SDF2-208ENST00000589788 GPRASP1Q5JY77 1395 aa14.71□□□□□ -0.05
SDF2-208ENST00000589788 PRR36Q9H6K5 1346 aa14.71□□□□□ -0.05
SDF2-208ENST00000589788 PSME1Q06323 249 aa14.71□□□□□ -0.05
SDF2-208ENST00000589788 POTEHQ6S545 545 aa14.71□□□□□ -0.05
SDF2-208ENST00000589788 PMFBP1Q8TBY8 1022 aa14.71□□□□□ -0.05
SDF2-208ENST00000589788 CARD11Q9BXL7 1154 aa14.71□□□□□ -0.05
SDF2-208ENST00000589788 NUDT16Q96DE0 195 aaKnown RBP14.7□□□□□ -0.06
SDF2-208ENST00000589788 SGIP1Q9BQI5 828 aa14.7□□□□□ -0.06
SDF2-208ENST00000589788 TSHZ2Q9NRE2 1034 aa14.7□□□□□ -0.06
SDF2-208ENST00000589788 TAOK2Q9UL54 1235 aa14.7□□□□□ -0.06
SDF2-208ENST00000589788 SRPK2P78362 688 aaKnown RBP14.69□□□□□ -0.06
SDF2-208ENST00000589788 NGDNQ8NEJ9 315 aaKnown RBP14.69□□□□□ -0.06
SDF2-208ENST00000589788 ATP7BP35670 1465 aa14.69□□□□□ -0.06
SDF2-208ENST00000589788 ILDR2Q71H61 639 aa14.68□□□□□ -0.06
SDF2-208ENST00000589788 TIMELESSQ9UNS1 1208 aa14.68□□□□□ -0.06
SDF2-208ENST00000589788 COL22A1Q8NFW1 1626 aaPredicted RBP14.68□□□□□ -0.06
SDF2-208ENST00000589788 SPATA31A3Q5VYP0 1347 aa14.68□□□□□ -0.06
SDF2-208ENST00000589788 EVC2Q86UK5 1308 aa14.68□□□□□ -0.06
SDF2-208ENST00000589788 STK25O00506 426 aa14.67□□□□□ -0.06
SDF2-208ENST00000589788 TSPYL2Q9H2G4 693 aaPredicted RBP14.67□□□□□ -0.06
SDF2-208ENST00000589788 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.66□□□□□ -0.06
SDF2-208ENST00000589788 LMOD2Q6P5Q4 547 aa14.66□□□□□ -0.06
SDF2-208ENST00000589788 ZFP91Q96JP5 570 aaPredicted RBP14.66□□□□□ -0.06
SDF2-208ENST00000589788 RGS17Q9UGC6 210 aaPredicted RBP14.66□□□□□ -0.06
SDF2-208ENST00000589788 CCDC61Q9Y6R9 512 aa14.66□□□□□ -0.06
SDF2-208ENST00000589788 TNS3Q68CZ2 1445 aa14.66□□□□□ -0.06
SDF2-208ENST00000589788 SBNO1A3KN83 1393 aa14.66□□□□□ -0.06
SDF2-208ENST00000589788 TOPAZ1Q8N9V7 1692 aa14.66□□□□□ -0.06
SDF2-208ENST00000589788 ADAMTS2O95450 1211 aa14.66□□□□□ -0.06
SDF2-208ENST00000589788 CABP2Q9NPB3 220 aa14.66□□□□□ -0.06
SDF2-208ENST00000589788 C8orf37Q96NL8 207 aa14.65□□□□□ -0.06
SDF2-208ENST00000589788 ARHGEF10O15013 1369 aa14.64□□□□□ -0.07
SDF2-208ENST00000589788 ZNF772Q68DY9 489 aaPredicted RBP14.64□□□□□ -0.07
SDF2-208ENST00000589788 CHRDL2Q6WN34 429 aa14.64□□□□□ -0.07
SDF2-208ENST00000589788 TRPM3Q9HCF6 1732 aaPredicted RBP14.63□□□□□ -0.07
SDF2-208ENST00000589788 PPIP5K1Q6PFW1 1433 aa14.63□□□□□ -0.07
SDF2-208ENST00000589788 PLEKHG3A1L390 1219 aa14.63□□□□□ -0.07
SDF2-208ENST00000589788 PAK3O75914 559 aaPredicted RBP14.63□□□□□ -0.07
SDF2-208ENST00000589788 NGLY1Q96IV0 654 aa14.63□□□□□ -0.07
SDF2-208ENST00000589788 ACEP12821 1306 aa14.62□□□□□ -0.07
SDF2-208ENST00000589788 AFF2P51816 1311 aa14.62□□□□□ -0.07
SDF2-208ENST00000589788 POTEAQ6S8J7 498 aa14.62□□□□□ -0.07
SDF2-208ENST00000589788 BCL11BQ9C0K0 894 aaPredicted RBP14.62□□□□□ -0.07
SDF2-208ENST00000589788 POLR3AO14802 1390 aaPredicted RBP14.62□□□□□ -0.07
SDF2-208ENST00000589788 SBNO2Q9Y2G9 1366 aa14.62□□□□□ -0.07
SDF2-208ENST00000589788 GTPBP6O43824 516 aaPredicted RBP14.61□□□□□ -0.07
SDF2-208ENST00000589788 PIP4P2Q8N4L2 257 aa14.61□□□□□ -0.07
SDF2-208ENST00000589788 MARF1Q9Y4F3 1742 aaKnown RBP14.6□□□□□ -0.07
SDF2-208ENST00000589788 ALS2Q96Q42 1657 aa14.6□□□□□ -0.07
SDF2-208ENST00000589788 ATAD2Q6PL18 1390 aa14.59□□□□□ -0.07
SDF2-208ENST00000589788 CABLES1Q8TDN4 633 aa14.59□□□□□ -0.07
SDF2-208ENST00000589788 CABP1Q9NZU7 370 aa14.59□□□□□ -0.07
SDF2-208ENST00000589788 STK24Q9Y6E0 443 aa14.58□□□□□ -0.08
SDF2-208ENST00000589788 ST20-MTHFSA0A0A6YYL1 179 aa14.57□□□□□ -0.08
SDF2-208ENST00000589788 ABCA3Q99758 1704 aa14.57□□□□□ -0.08
SDF2-208ENST00000589788 USP47Q96K76 1375 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms