RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 CCDC61Q9Y6R9 512 aa21.71■■□□□ 1.07
ERCC1-209ENST00000589214 PPIP5K1Q6PFW1 1433 aa21.71■■□□□ 1.07
ERCC1-209ENST00000589214 SLIT2O94813 1529 aa21.7■■□□□ 1.07
ERCC1-209ENST00000589214 CABP2Q9NPB3 220 aa21.7■■□□□ 1.06
ERCC1-209ENST00000589214 POLR3AO14802 1390 aaPredicted RBP21.7■■□□□ 1.06
ERCC1-209ENST00000589214 ACEP12821 1306 aa21.69■■□□□ 1.06
ERCC1-209ENST00000589214 PHRF1Q9P1Y6 1649 aaKnown RBP21.68■■□□□ 1.06
ERCC1-209ENST00000589214 NWD2Q9ULI1 1742 aa21.67■■□□□ 1.06
ERCC1-209ENST00000589214 CCER1Q8TC90 406 aaPredicted RBP21.66■■□□□ 1.06
ERCC1-209ENST00000589214 CARD11Q9BXL7 1154 aa21.66■■□□□ 1.06
ERCC1-209ENST00000589214 EVC2Q86UK5 1308 aa21.65■■□□□ 1.06
ERCC1-209ENST00000589214 PLEKHG3A1L390 1219 aa21.65■■□□□ 1.06
ERCC1-209ENST00000589214 GLI3P10071 1580 aa21.63■■□□□ 1.05
ERCC1-209ENST00000589214 UNC5CLQ8IV45 518 aa21.63■■□□□ 1.05
ERCC1-209ENST00000589214 COL14A1Q05707 1796 aaKnown RBP21.63■■□□□ 1.05
ERCC1-209ENST00000589214 NRAPQ86VF7 1730 aa21.63■■□□□ 1.05
ERCC1-209ENST00000589214 NUTM2GQ5VZR2 741 aa21.61■■□□□ 1.05
ERCC1-209ENST00000589214 NRKQ7Z2Y5 1582 aa21.6■■□□□ 1.05
ERCC1-209ENST00000589214 SBNO2Q9Y2G9 1366 aa21.6■■□□□ 1.05
ERCC1-209ENST00000589214 CLSPNQ9HAW4 1339 aa21.59■■□□□ 1.05
ERCC1-209ENST00000589214 USP6P35125 1406 aa21.59■■□□□ 1.05
ERCC1-209ENST00000589214 GJD4Q96KN9 370 aaPredicted RBP21.59■■□□□ 1.05
ERCC1-209ENST00000589214 CABP1Q9NZU7 370 aa21.59■■□□□ 1.05
ERCC1-209ENST00000589214 FAM83GA6ND36 823 aa21.58■■□□□ 1.05
ERCC1-209ENST00000589214 AKAP12Q02952 1782 aa21.57■■□□□ 1.04
ERCC1-209ENST00000589214 UPF1Q92900 1129 aaKnown RBP eCLIP21.56■■□□□ 1.04
ERCC1-209ENST00000589214 ATAD2Q6PL18 1390 aa21.56■■□□□ 1.04
ERCC1-209ENST00000589214 ABTB2Q8N961 1025 aa21.55■■□□□ 1.04
ERCC1-209ENST00000589214 PRDM11Q9NQV5 511 aa21.55■■□□□ 1.04
ERCC1-209ENST00000589214 CCDC9Q9Y3X0 531 aaKnown RBP21.55■■□□□ 1.04
ERCC1-209ENST00000589214 PIK3C2AO00443 1686 aa21.54■■□□□ 1.04
ERCC1-209ENST00000589214 KIAA0232Q92628 1395 aa21.54■■□□□ 1.04
ERCC1-209ENST00000589214 VPS72Q15906 364 aa21.54■■□□□ 1.04
ERCC1-209ENST00000589214 BTG4Q9NY30 223 aa21.54■■□□□ 1.04
ERCC1-209ENST00000589214 BRD4O60885 1362 aaPredicted RBP21.53■■□□□ 1.04
ERCC1-209ENST00000589214 USP19O94966 1318 aa21.53■■□□□ 1.04
ERCC1-209ENST00000589214 ZC3H6P61129 1189 aaKnown RBP21.51■■□□□ 1.03
ERCC1-209ENST00000589214 MON2Q7Z3U7 1717 aa21.51■■□□□ 1.03
ERCC1-209ENST00000589214 SSH2Q76I76 1423 aa21.5■■□□□ 1.03
ERCC1-209ENST00000589214 CHRNA2Q15822 529 aa21.5■■□□□ 1.03
ERCC1-209ENST00000589214 BRWD3Q6RI45 1802 aa21.5■■□□□ 1.03
ERCC1-209ENST00000589214 NLRP13Q86W25 1043 aa21.49■■□□□ 1.03
ERCC1-209ENST00000589214 TIMELESSQ9UNS1 1208 aa21.49■■□□□ 1.03
ERCC1-209ENST00000589214 CPSF1Q10570 1443 aaKnown RBP21.48■■□□□ 1.03
ERCC1-209ENST00000589214 SLIT3O75094 1523 aa21.48■■□□□ 1.03
ERCC1-209ENST00000589214 LMO7Q8WWI1 1683 aa21.47■■□□□ 1.03
ERCC1-209ENST00000589214 KTN1Q86UP2 1357 aaKnown RBP21.46■■□□□ 1.03
ERCC1-209ENST00000589214 ST20-MTHFSA0A0A6YYL1 179 aa21.45■■□□□ 1.02
ERCC1-209ENST00000589214 A0A0G2JS52 829 aa21.45■■□□□ 1.02
ERCC1-209ENST00000589214 NLRP6P59044 892 aa21.45■■□□□ 1.02
ERCC1-209ENST00000589214 MYT1Q01538 1121 aa21.45■■□□□ 1.02
ERCC1-209ENST00000589214 TTC21BQ7Z4L5 1316 aa21.45■■□□□ 1.02
ERCC1-209ENST00000589214 CPDO75976 1380 aa21.45■■□□□ 1.02
ERCC1-209ENST00000589214 USP47Q96K76 1375 aa21.45■■□□□ 1.02
ERCC1-209ENST00000589214 CD163L1Q9NR16 1453 aa21.45■■□□□ 1.02
ERCC1-209ENST00000589214 SEPT12Q8IYM1 358 aa21.44■■□□□ 1.02
ERCC1-209ENST00000589214 ZNF692Q9BU19 519 aaPredicted RBP21.44■■□□□ 1.02
ERCC1-209ENST00000589214 STRN4Q9NRL3 753 aa21.44■■□□□ 1.02
ERCC1-209ENST00000589214 GCP02774 474 aa21.43■■□□□ 1.02
ERCC1-209ENST00000589214 TMC1Q8TDI8 760 aa21.43■■□□□ 1.02
ERCC1-209ENST00000589214 TESK2Q96S53 571 aa21.43■■□□□ 1.02
ERCC1-209ENST00000589214 CAMTA1Q9Y6Y1 1673 aa21.43■■□□□ 1.02
ERCC1-209ENST00000589214 ZBTB7CA1YPR0 619 aa21.42■■□□□ 1.02
ERCC1-209ENST00000589214 FAM98CQ17RN3 349 aaKnown RBP21.42■■□□□ 1.02
ERCC1-209ENST00000589214 SPATA31A5Q5VU36 1347 aa21.42■■□□□ 1.02
ERCC1-209ENST00000589214 SPATA31A7Q8IWB4 1347 aa21.42■■□□□ 1.02
ERCC1-209ENST00000589214 TTC21AQ8NDW8 1320 aa21.42■■□□□ 1.02
ERCC1-209ENST00000589214 THSD7AQ9UPZ6 1657 aa21.41■■□□□ 1.02
ERCC1-209ENST00000589214 SLC12A5Q9H2X9 1139 aa21.39■■□□□ 1.01
ERCC1-209ENST00000589214 A0A1W2PP64 1363 aa21.38■■□□□ 1.01
ERCC1-209ENST00000589214 USP54Q70EL1 1684 aa21.38■■□□□ 1.01
ERCC1-209ENST00000589214 ONECUT3O60422 494 aaPredicted RBP21.38■■□□□ 1.01
ERCC1-209ENST00000589214 HDGFL2Q7Z4V5 671 aaPredicted RBP21.38■■□□□ 1.01
ERCC1-209ENST00000589214 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.38■■□□□ 1.01
ERCC1-209ENST00000589214 COL5A2P05997 1499 aaPredicted RBP21.38■■□□□ 1.01
ERCC1-209ENST00000589214 SPATA31A1Q5TZJ5 1347 aa21.37■■□□□ 1.01
ERCC1-209ENST00000589214 SOX12O15370 315 aa21.37■■□□□ 1.01
ERCC1-209ENST00000589214 NFAT5O94916 1531 aa21.36■■□□□ 1.01
ERCC1-209ENST00000589214 EVA1CP58658 441 aa21.36■■□□□ 1.01
ERCC1-209ENST00000589214 KRT27Q7Z3Y8 459 aa21.36■■□□□ 1.01
ERCC1-209ENST00000589214 PUS7Q96PZ0 661 aaKnown RBP21.36■■□□□ 1.01
ERCC1-209ENST00000589214 EDC4Q6P2E9 1401 aaKnown RBP21.36■■□□□ 1.01
ERCC1-209ENST00000589214 NINLQ9Y2I6 1382 aa21.36■■□□□ 1.01
ERCC1-209ENST00000589214 COL18A1P39060 1754 aa21.35■■□□□ 1.01
ERCC1-209ENST00000589214 NME9Q86XW9 330 aa21.34■■□□□ 1.01
ERCC1-209ENST00000589214 TERF2IPQ9NYB0 399 aa21.34■■□□□ 1.01
ERCC1-209ENST00000589214 USP35Q9P2H5 1018 aa21.34■■□□□ 1.01
ERCC1-209ENST00000589214 AATKQ6ZMQ8 1374 aa21.34■■□□□ 1.01
ERCC1-209ENST00000589214 SLC24A1O60721 1099 aa21.33■■□□□ 1.01
ERCC1-209ENST00000589214 LARP1Q6PKG0 1096 aaKnown RBP21.33■■□□□ 1.01
ERCC1-209ENST00000589214 ZRANB1Q9UGI0 708 aa21.33■■□□□ 1.01
ERCC1-209ENST00000589214 TMF1P82094 1093 aa21.32■■□□□ 1
ERCC1-209ENST00000589214 KCNH5Q8NCM2 988 aa21.32■■□□□ 1
ERCC1-209ENST00000589214 BLMP54132 1417 aaPredicted RBP21.31■■□□□ 1
ERCC1-209ENST00000589214 USP31Q70CQ4 1352 aa21.31■■□□□ 1
ERCC1-209ENST00000589214 EP400Q96L91 3159 aa21.31■■□□□ 1
ERCC1-209ENST00000589214 RGPD5Q99666 1765 aa21.31■■□□□ 1
ERCC1-209ENST00000589214 CRB1P82279 1406 aa21.29■■□□□ 1
ERCC1-209ENST00000589214 LTN1O94822 1766 aa21.29■■□□□ 1
ERCC1-209ENST00000589214 OVOS2A0A0J9YW53 1432 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms