RNA–Protein interactions for RNA: ENST00000588118.5

DNMT1-214, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-214ENST00000588118 PMFBP1Q8TBY8 1022 aa18.36■□□□□ 0.53
DNMT1-214ENST00000588118 LRRC7Q96NW7 1537 aa18.36■□□□□ 0.53
DNMT1-214ENST00000588118 GGNBP2Q9H3C7 697 aa18.36■□□□□ 0.53
DNMT1-214ENST00000588118 ZNF335Q9H4Z2 1342 aaPredicted RBP18.36■□□□□ 0.53
DNMT1-214ENST00000588118 SCAF1Q9H7N4 1312 aaKnown RBP18.36■□□□□ 0.53
DNMT1-214ENST00000588118 INSRP06213 1382 aa18.34■□□□□ 0.53
DNMT1-214ENST00000588118 FAM9BQ8IZU0 186 aa18.34■□□□□ 0.53
DNMT1-214ENST00000588118 C1orf167Q5SNV9 1468 aa18.33■□□□□ 0.53
DNMT1-214ENST00000588118 ESCO1Q5FWF5 840 aa18.33■□□□□ 0.52
DNMT1-214ENST00000588118 COG3Q96JB2 828 aa18.33■□□□□ 0.52
DNMT1-214ENST00000588118 KIF1AQ12756 1690 aa18.33■□□□□ 0.52
DNMT1-214ENST00000588118 CFAP53Q96M91 514 aa18.32■□□□□ 0.52
DNMT1-214ENST00000588118 MST1RQ04912 1400 aa18.32■□□□□ 0.52
DNMT1-214ENST00000588118 NME9Q86XW9 330 aa18.31■□□□□ 0.52
DNMT1-214ENST00000588118 AATKQ6ZMQ8 1374 aa18.3■□□□□ 0.52
DNMT1-214ENST00000588118 USP31Q70CQ4 1352 aa18.3■□□□□ 0.52
DNMT1-214ENST00000588118 XIRP1Q702N8 1843 aaKnown RBP18.29■□□□□ 0.52
DNMT1-214ENST00000588118 TNNT2P45379 298 aaPredicted RBP18.29■□□□□ 0.52
DNMT1-214ENST00000588118 MTHFSP49914 203 aa18.28■□□□□ 0.52
DNMT1-214ENST00000588118 PSME1Q06323 249 aa18.28■□□□□ 0.52
DNMT1-214ENST00000588118 WDR43Q15061 677 aaKnown RBP eCLIP18.28■□□□□ 0.52
DNMT1-214ENST00000588118 OVOS2A0A0J9YW53 1432 aa18.28■□□□□ 0.52
DNMT1-214ENST00000588118 OVOS2Q6IE36 1432 aa18.28■□□□□ 0.52
DNMT1-214ENST00000588118 ORAI2Q96SN7 254 aa18.26■□□□□ 0.51
DNMT1-214ENST00000588118 HNRNPUQ00839 825 aaKnown RBP eCLIP18.25■□□□□ 0.51
DNMT1-214ENST00000588118 SMG6Q86US8 1419 aaKnown RBP18.23■□□□□ 0.51
DNMT1-214ENST00000588118 USP54Q70EL1 1684 aa18.23■□□□□ 0.51
DNMT1-214ENST00000588118 ZRANB1Q9UGI0 708 aa18.23■□□□□ 0.51
DNMT1-214ENST00000588118 FOXO3O43524 673 aa18.22■□□□□ 0.51
DNMT1-214ENST00000588118 PAK3O75914 559 aaPredicted RBP18.22■□□□□ 0.51
DNMT1-214ENST00000588118 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
DNMT1-214ENST00000588118 BLMP54132 1417 aaPredicted RBP18.22■□□□□ 0.51
DNMT1-214ENST00000588118 NPHP3Q7Z494 1330 aa18.22■□□□□ 0.51
DNMT1-214ENST00000588118 PIK3C2AO00443 1686 aa18.22■□□□□ 0.51
DNMT1-214ENST00000588118 PNPLA6Q8IY17 1366 aa18.21■□□□□ 0.51
DNMT1-214ENST00000588118 NLRP6P59044 892 aa18.21■□□□□ 0.51
DNMT1-214ENST00000588118 ABTB2Q8N961 1025 aa18.21■□□□□ 0.51
DNMT1-214ENST00000588118 POLKQ9UBT6 870 aa18.21■□□□□ 0.51
DNMT1-214ENST00000588118 NUDCQ9Y266 331 aa18.21■□□□□ 0.51
DNMT1-214ENST00000588118 KRT28Q7Z3Y7 464 aa18.2■□□□□ 0.5
DNMT1-214ENST00000588118 CDK12Q9NYV4 1490 aaPredicted RBP18.2■□□□□ 0.5
DNMT1-214ENST00000588118 SLAIN2Q9P270 581 aa18.19■□□□□ 0.5
DNMT1-214ENST00000588118 ADAMTS8Q9UP79 889 aa18.19■□□□□ 0.5
DNMT1-214ENST00000588118 LTBP4Q8N2S1 1624 aa18.19■□□□□ 0.5
DNMT1-214ENST00000588118 ZBED9Q6R2W3 1325 aa18.19■□□□□ 0.5
DNMT1-214ENST00000588118 SBNO1A3KN83 1393 aa18.18■□□□□ 0.5
DNMT1-214ENST00000588118 COL3A1P02461 1466 aaPredicted RBP18.17■□□□□ 0.5
DNMT1-214ENST00000588118 TRPM3Q9HCF6 1732 aaPredicted RBP18.17■□□□□ 0.5
DNMT1-214ENST00000588118 MAP2P11137 1827 aaKnown RBP18.16■□□□□ 0.5
DNMT1-214ENST00000588118 SHPRHQ149N8 1683 aa18.16■□□□□ 0.5
DNMT1-214ENST00000588118 DIAPH1O60610 1272 aaKnown RBP18.16■□□□□ 0.5
DNMT1-214ENST00000588118 BRINP3Q76B58 766 aa18.16■□□□□ 0.5
DNMT1-214ENST00000588118 KIF24Q5T7B8 1368 aa18.16■□□□□ 0.5
DNMT1-214ENST00000588118 KCNH5Q8NCM2 988 aa18.15■□□□□ 0.5
DNMT1-214ENST00000588118 PPM1GO15355 546 aaPredicted RBP18.14■□□□□ 0.49
DNMT1-214ENST00000588118 NGEFQ8N5V2 710 aa18.13■□□□□ 0.49
DNMT1-214ENST00000588118 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
DNMT1-214ENST00000588118 EMILIN1Q9Y6C2 1016 aa18.13■□□□□ 0.49
DNMT1-214ENST00000588118 MARF1Q9Y4F3 1742 aaKnown RBP18.12■□□□□ 0.49
DNMT1-214ENST00000588118 XPCQ01831 940 aaPredicted RBP18.12■□□□□ 0.49
DNMT1-214ENST00000588118 RRS1Q15050 365 aaKnown RBP18.12■□□□□ 0.49
DNMT1-214ENST00000588118 PXDNQ92626 1479 aa18.12■□□□□ 0.49
DNMT1-214ENST00000588118 U2AF1L5P0DN76 240 aaPredicted RBP18.11■□□□□ 0.49
DNMT1-214ENST00000588118 FBLN1P23142 703 aa18.11■□□□□ 0.49
DNMT1-214ENST00000588118 U2AF1Q01081 240 aaKnown RBP eCLIP18.11■□□□□ 0.49
DNMT1-214ENST00000588118 TNS3Q68CZ2 1445 aa18.11■□□□□ 0.49
DNMT1-214ENST00000588118 ALS2Q96Q42 1657 aa18.11■□□□□ 0.49
DNMT1-214ENST00000588118 SLIT3O75094 1523 aa18.1■□□□□ 0.49
DNMT1-214ENST00000588118 ARHGEF10O15013 1369 aa18.1■□□□□ 0.49
DNMT1-214ENST00000588118 FLT4P35916 1363 aa18.1■□□□□ 0.49
DNMT1-214ENST00000588118 USP19O94966 1318 aa18.1■□□□□ 0.49
DNMT1-214ENST00000588118 MAP3K19Q56UN5 1328 aa18.1■□□□□ 0.49
DNMT1-214ENST00000588118 NUTM2GQ5VZR2 741 aa18.1■□□□□ 0.49
DNMT1-214ENST00000588118 RTL1A6NKG5 1358 aa18.09■□□□□ 0.49
DNMT1-214ENST00000588118 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
DNMT1-214ENST00000588118 RUNDC1Q96C34 613 aa18.09■□□□□ 0.49
DNMT1-214ENST00000588118 SOS2Q07890 1332 aaPredicted RBP18.08■□□□□ 0.49
DNMT1-214ENST00000588118 SPATA31A3Q5VYP0 1347 aa18.08■□□□□ 0.49
DNMT1-214ENST00000588118 SOX12O15370 315 aa18.08■□□□□ 0.48
DNMT1-214ENST00000588118 IL13P35225 146 aa18.08■□□□□ 0.48
DNMT1-214ENST00000588118 AMPHP49418 695 aa18.08■□□□□ 0.48
DNMT1-214ENST00000588118 LMOD2Q6P5Q4 547 aa18.08■□□□□ 0.48
DNMT1-214ENST00000588118 NCBP3Q53F19 620 aaKnown RBP18.07■□□□□ 0.48
DNMT1-214ENST00000588118 NFAT5O94916 1531 aa18.07■□□□□ 0.48
DNMT1-214ENST00000588118 PDE3BQ13370 1112 aa18.06■□□□□ 0.48
DNMT1-214ENST00000588118 PEAK1Q9H792 1746 aa18.06■□□□□ 0.48
DNMT1-214ENST00000588118 FCHSD2O94868 740 aa18.05■□□□□ 0.48
DNMT1-214ENST00000588118 GCP02774 474 aa18.05■□□□□ 0.48
DNMT1-214ENST00000588118 DDX17Q92841 729 aaKnown RBP18.05■□□□□ 0.48
DNMT1-214ENST00000588118 IQSEC2Q5JU85 1478 aa18.05■□□□□ 0.48
DNMT1-214ENST00000588118 NHSL1Q5SYE7 1610 aa18.05■□□□□ 0.48
DNMT1-214ENST00000588118 MED1Q15648 1581 aaPredicted RBP18.04■□□□□ 0.48
DNMT1-214ENST00000588118 NEFMP07197 916 aa18.04■□□□□ 0.48
DNMT1-214ENST00000588118 CCDC146Q8IYE0 955 aa18.04■□□□□ 0.48
DNMT1-214ENST00000588118 PHRF1Q9P1Y6 1649 aaKnown RBP18.04■□□□□ 0.48
DNMT1-214ENST00000588118 HOXC9P31274 260 aa18.03■□□□□ 0.48
DNMT1-214ENST00000588118 EIF4A2Q14240 407 aaKnown RBP18.03■□□□□ 0.48
DNMT1-214ENST00000588118 APAF1O14727 1248 aa18.02■□□□□ 0.48
DNMT1-214ENST00000588118 TOM1O60784 492 aa18.02■□□□□ 0.48
DNMT1-214ENST00000588118 HSP90AB2PQ58FF8 381 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms