RNA–Protein interactions for RNA: ENST00000586667.1

DNMT1-208, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-208ENST00000586667 TERF2IPQ9NYB0 399 aa17.42■□□□□ 0.38
DNMT1-208ENST00000586667 ANKRD26Q9UPS8 1709 aa17.41■□□□□ 0.38
DNMT1-208ENST00000586667 TNS3Q68CZ2 1445 aa17.41■□□□□ 0.38
DNMT1-208ENST00000586667 PER1O15534 1290 aaPredicted RBP17.41■□□□□ 0.38
DNMT1-208ENST00000586667 XPCQ01831 940 aaPredicted RBP17.41■□□□□ 0.38
DNMT1-208ENST00000586667 NGDNQ8NEJ9 315 aaKnown RBP17.41■□□□□ 0.38
DNMT1-208ENST00000586667 ABCA3Q99758 1704 aa17.41■□□□□ 0.38
DNMT1-208ENST00000586667 SBNO1A3KN83 1393 aa17.4■□□□□ 0.38
DNMT1-208ENST00000586667 BRD4O60885 1362 aaPredicted RBP17.4■□□□□ 0.38
DNMT1-208ENST00000586667 COL22A1Q8NFW1 1626 aaPredicted RBP17.39■□□□□ 0.38
DNMT1-208ENST00000586667 OVOS2A0A0J9YW53 1432 aa17.39■□□□□ 0.38
DNMT1-208ENST00000586667 OVOS2Q6IE36 1432 aa17.39■□□□□ 0.38
DNMT1-208ENST00000586667 HDGFL2Q7Z4V5 671 aaPredicted RBP17.39■□□□□ 0.37
DNMT1-208ENST00000586667 DDX10Q13206 875 aaKnown RBP17.38■□□□□ 0.37
DNMT1-208ENST00000586667 TTC21BQ7Z4L5 1316 aa17.38■□□□□ 0.37
DNMT1-208ENST00000586667 PHRF1Q9P1Y6 1649 aaKnown RBP17.37■□□□□ 0.37
DNMT1-208ENST00000586667 SHPRHQ149N8 1683 aa17.37■□□□□ 0.37
DNMT1-208ENST00000586667 KRT28Q7Z3Y7 464 aa17.37■□□□□ 0.37
DNMT1-208ENST00000586667 ZNF692Q9BU19 519 aaPredicted RBP17.37■□□□□ 0.37
DNMT1-208ENST00000586667 SLIT3O75094 1523 aa17.37■□□□□ 0.37
DNMT1-208ENST00000586667 AMER1Q5JTC6 1135 aaPredicted RBP17.36■□□□□ 0.37
DNMT1-208ENST00000586667 SPATA31A3Q5VYP0 1347 aa17.36■□□□□ 0.37
DNMT1-208ENST00000586667 SCAF1Q9H7N4 1312 aaKnown RBP17.36■□□□□ 0.37
DNMT1-208ENST00000586667 PSME1Q06323 249 aa17.35■□□□□ 0.37
DNMT1-208ENST00000586667 TTC21AQ8NDW8 1320 aa17.35■□□□□ 0.37
DNMT1-208ENST00000586667 USP31Q70CQ4 1352 aa17.35■□□□□ 0.37
DNMT1-208ENST00000586667 NPC1L1Q9UHC9 1359 aa17.35■□□□□ 0.37
DNMT1-208ENST00000586667 NME9Q86XW9 330 aa17.34■□□□□ 0.37
DNMT1-208ENST00000586667 NFAT5O94916 1531 aa17.33■□□□□ 0.37
DNMT1-208ENST00000586667 PNPLA6Q8IY17 1366 aa17.33■□□□□ 0.36
DNMT1-208ENST00000586667 ARHGEF10O15013 1369 aa17.32■□□□□ 0.36
DNMT1-208ENST00000586667 NSD2O96028 1365 aa17.32■□□□□ 0.36
DNMT1-208ENST00000586667 USP19O94966 1318 aa17.32■□□□□ 0.36
DNMT1-208ENST00000586667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.32■□□□□ 0.36
DNMT1-208ENST00000586667 ZRANB1Q9UGI0 708 aa17.32■□□□□ 0.36
DNMT1-208ENST00000586667 CGNL1Q0VF96 1302 aa17.31■□□□□ 0.36
DNMT1-208ENST00000586667 FYB1O15117 783 aa17.31■□□□□ 0.36
DNMT1-208ENST00000586667 HSPA1LP34931 641 aa17.31■□□□□ 0.36
DNMT1-208ENST00000586667 FBXO41Q8TF61 875 aa17.3■□□□□ 0.36
DNMT1-208ENST00000586667 KNSTRNQ9Y448 316 aa17.29■□□□□ 0.36
DNMT1-208ENST00000586667 PAK3O75914 559 aaPredicted RBP17.28■□□□□ 0.36
DNMT1-208ENST00000586667 PARD3Q8TEW0 1356 aa17.28■□□□□ 0.36
DNMT1-208ENST00000586667 GGNBP2Q9H3C7 697 aa17.27■□□□□ 0.36
DNMT1-208ENST00000586667 NUTM2GQ5VZR2 741 aa17.26■□□□□ 0.35
DNMT1-208ENST00000586667 ABTB2Q8N961 1025 aa17.26■□□□□ 0.35
DNMT1-208ENST00000586667 LRP6O75581 1613 aa17.25■□□□□ 0.35
DNMT1-208ENST00000586667 PEAK1Q9H792 1746 aa17.25■□□□□ 0.35
DNMT1-208ENST00000586667 SMG6Q86US8 1419 aaKnown RBP17.25■□□□□ 0.35
DNMT1-208ENST00000586667 LRRC59Q96AG4 307 aaKnown RBP17.25■□□□□ 0.35
DNMT1-208ENST00000586667 JCADQ9P266 1359 aa17.25■□□□□ 0.35
DNMT1-208ENST00000586667 LTN1O94822 1766 aa17.23■□□□□ 0.35
DNMT1-208ENST00000586667 NLRP6P59044 892 aa17.23■□□□□ 0.35
DNMT1-208ENST00000586667 CC2D1BQ5T0F9 858 aaKnown RBP17.23■□□□□ 0.35
DNMT1-208ENST00000586667 LMO7Q8WWI1 1683 aa17.22■□□□□ 0.35
DNMT1-208ENST00000586667 COL18A1P39060 1754 aa17.21■□□□□ 0.35
DNMT1-208ENST00000586667 AATKQ6ZMQ8 1374 aa17.21■□□□□ 0.35
DNMT1-208ENST00000586667 LMOD2Q6P5Q4 547 aa17.21■□□□□ 0.35
DNMT1-208ENST00000586667 CABLES1Q8TDN4 633 aa17.21■□□□□ 0.35
DNMT1-208ENST00000586667 NLRP13Q86W25 1043 aa17.2■□□□□ 0.34
DNMT1-208ENST00000586667 COG3Q96JB2 828 aa17.2■□□□□ 0.34
DNMT1-208ENST00000586667 ABCC6O95255 1503 aa17.2■□□□□ 0.34
DNMT1-208ENST00000586667 CPDO75976 1380 aa17.19■□□□□ 0.34
DNMT1-208ENST00000586667 FBLN1P23142 703 aa17.18■□□□□ 0.34
DNMT1-208ENST00000586667 PRKRIP1Q9H875 184 aaPredicted RBP17.18■□□□□ 0.34
DNMT1-208ENST00000586667 COL3A1P02461 1466 aaPredicted RBP17.18■□□□□ 0.34
DNMT1-208ENST00000586667 PLCH1Q4KWH8 1693 aa17.17■□□□□ 0.34
DNMT1-208ENST00000586667 GCP02774 474 aa17.17■□□□□ 0.34
DNMT1-208ENST00000586667 MORC1Q86VD1 984 aa17.17■□□□□ 0.34
DNMT1-208ENST00000586667 CDK12Q9NYV4 1490 aaPredicted RBP17.17■□□□□ 0.34
DNMT1-208ENST00000586667 MAP2P11137 1827 aaKnown RBP17.17■□□□□ 0.34
DNMT1-208ENST00000586667 SPATA31A6Q5VVP1 1343 aa17.16■□□□□ 0.34
DNMT1-208ENST00000586667 KIAA0232Q92628 1395 aa17.15■□□□□ 0.34
DNMT1-208ENST00000586667 COL14A1Q05707 1796 aaKnown RBP17.15■□□□□ 0.34
DNMT1-208ENST00000586667 CNGB1Q14028 1251 aaPredicted RBP17.15■□□□□ 0.34
DNMT1-208ENST00000586667 DIEXFQ68CQ4 756 aaKnown RBP17.15■□□□□ 0.34
DNMT1-208ENST00000586667 NRAPQ86VF7 1730 aa17.15■□□□□ 0.34
DNMT1-208ENST00000586667 MAP3K19Q56UN5 1328 aa17.15■□□□□ 0.34
DNMT1-208ENST00000586667 SOX12O15370 315 aa17.14■□□□□ 0.33
DNMT1-208ENST00000586667 PLEKHG5O94827 1062 aa17.14■□□□□ 0.33
DNMT1-208ENST00000586667 TNNT2P45379 298 aaPredicted RBP17.14■□□□□ 0.33
DNMT1-208ENST00000586667 RTL1A6NKG5 1358 aa17.14■□□□□ 0.33
DNMT1-208ENST00000586667 PPP2R1AP30153 589 aa17.13■□□□□ 0.33
DNMT1-208ENST00000586667 RRS1Q15050 365 aaKnown RBP17.13■□□□□ 0.33
DNMT1-208ENST00000586667 RALBP1Q15311 655 aa17.13■□□□□ 0.33
DNMT1-208ENST00000586667 ARHGEF25Q86VW2 580 aa17.13■□□□□ 0.33
DNMT1-208ENST00000586667 KCNH5Q8NCM2 988 aa17.13■□□□□ 0.33
DNMT1-208ENST00000586667 EMILIN1Q9Y6C2 1016 aa17.13■□□□□ 0.33
DNMT1-208ENST00000586667 POLKQ9UBT6 870 aa17.12■□□□□ 0.33
DNMT1-208ENST00000586667 CAMTA1Q9Y6Y1 1673 aa17.12■□□□□ 0.33
DNMT1-208ENST00000586667 KIF24Q5T7B8 1368 aa17.12■□□□□ 0.33
DNMT1-208ENST00000586667 RGPD5Q99666 1765 aa17.12■□□□□ 0.33
DNMT1-208ENST00000586667 NWD2Q9ULI1 1742 aa17.11■□□□□ 0.33
DNMT1-208ENST00000586667 RGPD1P0DJD0 1748 aa17.1■□□□□ 0.33
DNMT1-208ENST00000586667 MYBBP1AQ9BQG0 1328 aaKnown RBP17.1■□□□□ 0.33
DNMT1-208ENST00000586667 FLT4P35916 1363 aa17.1■□□□□ 0.33
DNMT1-208ENST00000586667 SLIT2O94813 1529 aa17.1■□□□□ 0.33
DNMT1-208ENST00000586667 ZC3H6P61129 1189 aaKnown RBP17.09■□□□□ 0.33
DNMT1-208ENST00000586667 INSRP06213 1382 aa17.09■□□□□ 0.33
DNMT1-208ENST00000586667 COL5A2P05997 1499 aaPredicted RBP17.09■□□□□ 0.33
DNMT1-208ENST00000586667 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms