RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, human

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP1-208	ENST00000585956	FAM182B	Q5T319	152 aa		28.75	■■■□□ 2.19
PTBP1-208	ENST00000585956	GPRASP1	Q5JY77	1395 aa		28.75	■■■□□ 2.19
PTBP1-208	ENST00000585956	THSD7A	Q9UPZ6	1657 aa		28.7	■■■□□ 2.19
PTBP1-208	ENST00000585956	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.7	■■■□□ 2.19
PTBP1-208	ENST00000585956	PAK3	O75914	559 aa	Predicted RBP	28.7	■■■□□ 2.18
PTBP1-208	ENST00000585956	NGDN	Q8NEJ9	315 aa	Known RBP	28.7	■■■□□ 2.18
PTBP1-208	ENST00000585956	EIF3A	Q14152	1382 aa	Known RBP	28.7	■■■□□ 2.18
PTBP1-208	ENST00000585956	SPATA31A5	Q5VU36	1347 aa		28.69	■■■□□ 2.18
PTBP1-208	ENST00000585956	SPATA31A7	Q8IWB4	1347 aa		28.69	■■■□□ 2.18
PTBP1-208	ENST00000585956	ITSN1	Q15811	1721 aa		28.69	■■■□□ 2.18
PTBP1-208	ENST00000585956		A0A0G2JS52	829 aa		28.69	■■■□□ 2.18
PTBP1-208	ENST00000585956	MYT1	Q01538	1121 aa		28.69	■■■□□ 2.18
PTBP1-208	ENST00000585956	NUDT16	Q96DE0	195 aa	Known RBP	28.69	■■■□□ 2.18
PTBP1-208	ENST00000585956	TOPAZ1	Q8N9V7	1692 aa		28.69	■■■□□ 2.18
PTBP1-208	ENST00000585956	CHRNA2	Q15822	529 aa		28.66	■■■□□ 2.18
PTBP1-208	ENST00000585956	NUTM2G	Q5VZR2	741 aa		28.66	■■■□□ 2.18
PTBP1-208	ENST00000585956	KIAA0232	Q92628	1395 aa		28.65	■■■□□ 2.18
PTBP1-208	ENST00000585956	SF3B2	Q13435	895 aa	Known RBP	28.64	■■■□□ 2.18
PTBP1-208	ENST00000585956	CDK19	Q9BWU1	502 aa		28.64	■■■□□ 2.18
PTBP1-208	ENST00000585956	PSD	A5PKW4	1024 aa	Predicted RBP	28.63	■■■□□ 2.17
PTBP1-208	ENST00000585956	PRDM11	Q9NQV5	511 aa		28.63	■■■□□ 2.17
PTBP1-208	ENST00000585956	TNS1	Q9HBL0	1735 aa	Known RBP	28.63	■■■□□ 2.17
PTBP1-208	ENST00000585956	NBPF1	Q3BBV0	1214 aa		28.62	■■■□□ 2.17
PTBP1-208	ENST00000585956	HRC	P23327	699 aa		28.6	■■■□□ 2.17
PTBP1-208	ENST00000585956	POLR3A	O14802	1390 aa	Predicted RBP	28.6	■■■□□ 2.17
PTBP1-208	ENST00000585956	ZC3H6	P61129	1189 aa	Known RBP	28.59	■■■□□ 2.17
PTBP1-208	ENST00000585956	EN1	Q05925	392 aa	Predicted RBP	28.59	■■■□□ 2.17
PTBP1-208	ENST00000585956	RGPD1	P0DJD0	1748 aa		28.59	■■■□□ 2.17
PTBP1-208	ENST00000585956	ACE	P12821	1306 aa		28.59	■■■□□ 2.17
PTBP1-208	ENST00000585956	NRK	Q7Z2Y5	1582 aa		28.58	■■■□□ 2.17
PTBP1-208	ENST00000585956	LRP5	O75197	1615 aa		28.58	■■■□□ 2.17
PTBP1-208	ENST00000585956	KIAA1210	Q9ULL0	1709 aa		28.58	■■■□□ 2.17
PTBP1-208	ENST00000585956	STAC3	Q96MF2	364 aa		28.58	■■■□□ 2.17
PTBP1-208	ENST00000585956	SPATA31A1	Q5TZJ5	1347 aa		28.58	■■■□□ 2.17
PTBP1-208	ENST00000585956	STRN4	Q9NRL3	753 aa		28.56	■■■□□ 2.16
PTBP1-208	ENST00000585956	NBPF8	Q3BBV2	869 aa		28.55	■■■□□ 2.16
PTBP1-208	ENST00000585956	BAG6	P46379	1132 aa		28.54	■■■□□ 2.16
PTBP1-208	ENST00000585956	CAMTA1	Q9Y6Y1	1673 aa		28.54	■■■□□ 2.16
PTBP1-208	ENST00000585956	LMO7	Q8WWI1	1683 aa		28.52	■■■□□ 2.16
PTBP1-208	ENST00000585956	PLEKHG3	A1L390	1219 aa		28.52	■■■□□ 2.16
PTBP1-208	ENST00000585956	CCDC61	Q9Y6R9	512 aa		28.51	■■■□□ 2.15
PTBP1-208	ENST00000585956	SSH2	Q76I76	1423 aa		28.5	■■■□□ 2.15
PTBP1-208	ENST00000585956	USP35	Q9P2H5	1018 aa		28.49	■■■□□ 2.15
PTBP1-208	ENST00000585956	DISP2	A7MBM2	1401 aa		28.49	■■■□□ 2.15
PTBP1-208	ENST00000585956	EZH2	Q15910	746 aa	Known RBP	28.48	■■■□□ 2.15
PTBP1-208	ENST00000585956	USP19	O94966	1318 aa		28.47	■■■□□ 2.15
PTBP1-208	ENST00000585956	LARP1	Q6PKG0	1096 aa	Known RBP	28.47	■■■□□ 2.15
PTBP1-208	ENST00000585956	CABP2	Q9NPB3	220 aa		28.47	■■■□□ 2.15
PTBP1-208	ENST00000585956	TRIM37	O94972	964 aa		28.46	■■■□□ 2.15
PTBP1-208	ENST00000585956	QRICH2	Q9H0J4	1663 aa		28.45	■■■□□ 2.15
PTBP1-208	ENST00000585956	PPIP5K1	Q6PFW1	1433 aa		28.45	■■■□□ 2.15
PTBP1-208	ENST00000585956	R3HDM1	Q15032	1099 aa	Known RBP	28.45	■■■□□ 2.14
PTBP1-208	ENST00000585956	ABTB2	Q8N961	1025 aa		28.44	■■■□□ 2.14
PTBP1-208	ENST00000585956	CAMKK2	Q96RR4	588 aa		28.43	■■■□□ 2.14
PTBP1-208	ENST00000585956	CPD	O75976	1380 aa		28.42	■■■□□ 2.14
PTBP1-208	ENST00000585956	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.41	■■■□□ 2.14
PTBP1-208	ENST00000585956	SRPK2	P78362	688 aa	Known RBP	28.4	■■■□□ 2.14
PTBP1-208	ENST00000585956	BARGIN	Q6ZT62	677 aa		28.39	■■■□□ 2.14
PTBP1-208	ENST00000585956	COL5A2	P05997	1499 aa	Predicted RBP	28.38	■■■□□ 2.13
PTBP1-208	ENST00000585956	RREB1	Q92766	1687 aa		28.38	■■■□□ 2.13
PTBP1-208	ENST00000585956	GC	P02774	474 aa		28.37	■■■□□ 2.13
PTBP1-208	ENST00000585956	EVA1C	P58658	441 aa		28.37	■■■□□ 2.13
PTBP1-208	ENST00000585956	FAM196A	Q6ZSG2	479 aa		28.37	■■■□□ 2.13
PTBP1-208	ENST00000585956	NUP188	Q5SRE5	1749 aa		28.36	■■■□□ 2.13
PTBP1-208	ENST00000585956	PIK3C2A	O00443	1686 aa		28.35	■■■□□ 2.13
PTBP1-208	ENST00000585956	CABP1	Q9NZU7	370 aa		28.35	■■■□□ 2.13
PTBP1-208	ENST00000585956	USP6	P35125	1406 aa		28.35	■■■□□ 2.13
PTBP1-208	ENST00000585956	APBA3	O96018	575 aa		28.34	■■■□□ 2.13
PTBP1-208	ENST00000585956	TCP11L2	Q8N4U5	519 aa		28.34	■■■□□ 2.13
PTBP1-208	ENST00000585956	L3MBTL2	Q969R5	705 aa		28.34	■■■□□ 2.13
PTBP1-208	ENST00000585956	SLIT3	O75094	1523 aa		28.33	■■■□□ 2.13
PTBP1-208	ENST00000585956	PARP4	Q9UKK3	1724 aa	Known RBP	28.33	■■■□□ 2.13
PTBP1-208	ENST00000585956	COL18A1	P39060	1754 aa		28.32	■■■□□ 2.12
PTBP1-208	ENST00000585956	TRPM1	Q7Z4N2	1603 aa		28.32	■■■□□ 2.12
PTBP1-208	ENST00000585956	NLRP13	Q86W25	1043 aa		28.31	■■■□□ 2.12
PTBP1-208	ENST00000585956	SIN3A	Q96ST3	1273 aa		28.31	■■■□□ 2.12
PTBP1-208	ENST00000585956	PEAK1	Q9H792	1746 aa		28.31	■■■□□ 2.12
PTBP1-208	ENST00000585956	ZBTB7C	A1YPR0	619 aa		28.29	■■■□□ 2.12
PTBP1-208	ENST00000585956	PDE3B	Q13370	1112 aa		28.29	■■■□□ 2.12
PTBP1-208	ENST00000585956	LRRC37A3	O60309	1634 aa		28.29	■■■□□ 2.12
PTBP1-208	ENST00000585956	NLRP6	P59044	892 aa		28.26	■■■□□ 2.11
PTBP1-208	ENST00000585956	AXIN2	Q9Y2T1	843 aa		28.26	■■■□□ 2.11
PTBP1-208	ENST00000585956	CRB1	P82279	1406 aa		28.26	■■■□□ 2.11
PTBP1-208	ENST00000585956	PTF1A	Q7RTS3	328 aa		28.25	■■■□□ 2.11
PTBP1-208	ENST00000585956	RGPD5	Q99666	1765 aa		28.24	■■■□□ 2.11
PTBP1-208	ENST00000585956	AATK	Q6ZMQ8	1374 aa		28.24	■■■□□ 2.11
PTBP1-208	ENST00000585956	SBF2	Q86WG5	1849 aa		28.23	■■■□□ 2.11
PTBP1-208	ENST00000585956	WNK3	Q9BYP7	1800 aa		28.23	■■■□□ 2.11
PTBP1-208	ENST00000585956	THRAP3	Q9Y2W1	955 aa	Known RBP	28.23	■■■□□ 2.11
PTBP1-208	ENST00000585956	PARD3	Q8TEW0	1356 aa		28.23	■■■□□ 2.11
PTBP1-208	ENST00000585956	AKAP12	Q02952	1782 aa		28.22	■■■□□ 2.11
PTBP1-208	ENST00000585956	BRD4	O60885	1362 aa	Predicted RBP	28.22	■■■□□ 2.11
PTBP1-208	ENST00000585956	CPSF1	Q10570	1443 aa	Known RBP	28.18	■■■□□ 2.1
PTBP1-208	ENST00000585956	TTC21B	Q7Z4L5	1316 aa		28.17	■■■□□ 2.1
PTBP1-208	ENST00000585956	EVC2	Q86UK5	1308 aa		28.17	■■■□□ 2.1
PTBP1-208	ENST00000585956	NFAT5	O94916	1531 aa		28.16	■■■□□ 2.1
PTBP1-208	ENST00000585956	SOX12	O15370	315 aa		28.15	■■■□□ 2.1
PTBP1-208	ENST00000585956	NEUROD1	Q13562	356 aa		28.15	■■■□□ 2.1
PTBP1-208	ENST00000585956	OVOS2	A0A0G2JMS6	1433 aa		28.15	■■■□□ 2.1
PTBP1-208	ENST00000585956	OVOS2	A0A0J9YW53	1432 aa		28.15	■■■□□ 2.1

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms