RNA–Protein interactions for RNA: ENST00000584483.5

SMARCD2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-211ENST00000584483 TTC21BQ7Z4L5 1316 aa19.5■□□□□ 0.71
SMARCD2-211ENST00000584483 MYBBP1AQ9BQG0 1328 aaKnown RBP19.5■□□□□ 0.71
SMARCD2-211ENST00000584483 NME9Q86XW9 330 aa19.49■□□□□ 0.71
SMARCD2-211ENST00000584483 NSD2O96028 1365 aa19.47■□□□□ 0.71
SMARCD2-211ENST00000584483 PPP2R1AP30153 589 aa19.47■□□□□ 0.71
SMARCD2-211ENST00000584483 MORC1Q86VD1 984 aa19.46■□□□□ 0.71
SMARCD2-211ENST00000584483 KIF1AQ12756 1690 aa19.46■□□□□ 0.71
SMARCD2-211ENST00000584483 FOXO3O43524 673 aa19.45■□□□□ 0.7
SMARCD2-211ENST00000584483 PIK3C2AO00443 1686 aa19.44■□□□□ 0.7
SMARCD2-211ENST00000584483 SLAIN2Q9P270 581 aa19.44■□□□□ 0.7
SMARCD2-211ENST00000584483 MARF1Q9Y4F3 1742 aaKnown RBP19.44■□□□□ 0.7
SMARCD2-211ENST00000584483 TRPM3Q9HCF6 1732 aaPredicted RBP19.43■□□□□ 0.7
SMARCD2-211ENST00000584483 DDX17Q92841 729 aaKnown RBP19.43■□□□□ 0.7
SMARCD2-211ENST00000584483 FBLN1P23142 703 aa19.42■□□□□ 0.7
SMARCD2-211ENST00000584483 TNNT2P45379 298 aaPredicted RBP19.42■□□□□ 0.7
SMARCD2-211ENST00000584483 XPCQ01831 940 aaPredicted RBP19.42■□□□□ 0.7
SMARCD2-211ENST00000584483 BRINP3Q76B58 766 aa19.42■□□□□ 0.7
SMARCD2-211ENST00000584483 NLRP13Q86W25 1043 aa19.42■□□□□ 0.7
SMARCD2-211ENST00000584483 MRS2Q9HD23 443 aa19.42■□□□□ 0.7
SMARCD2-211ENST00000584483 BRD4O60885 1362 aaPredicted RBP19.42■□□□□ 0.7
SMARCD2-211ENST00000584483 TTC21AQ8NDW8 1320 aa19.41■□□□□ 0.7
SMARCD2-211ENST00000584483 OVOS2A0A0J9YW53 1432 aa19.41■□□□□ 0.7
SMARCD2-211ENST00000584483 OVOS2Q6IE36 1432 aa19.41■□□□□ 0.7
SMARCD2-211ENST00000584483 PSME1Q06323 249 aa19.4■□□□□ 0.7
SMARCD2-211ENST00000584483 KRT28Q7Z3Y7 464 aa19.39■□□□□ 0.69
SMARCD2-211ENST00000584483 USP31Q70CQ4 1352 aa19.38■□□□□ 0.69
SMARCD2-211ENST00000584483 USP54Q70EL1 1684 aa19.38■□□□□ 0.69
SMARCD2-211ENST00000584483 MAP2P11137 1827 aaKnown RBP19.37■□□□□ 0.69
SMARCD2-211ENST00000584483 NUTM2GQ5VZR2 741 aa19.36■□□□□ 0.69
SMARCD2-211ENST00000584483 PNISRQ8TF01 805 aaKnown RBP19.36■□□□□ 0.69
SMARCD2-211ENST00000584483 COG3Q96JB2 828 aa19.36■□□□□ 0.69
SMARCD2-211ENST00000584483 PXDNQ92626 1479 aa19.35■□□□□ 0.69
SMARCD2-211ENST00000584483 SCAF1Q9H7N4 1312 aaKnown RBP19.35■□□□□ 0.69
SMARCD2-211ENST00000584483 PAK3O75914 559 aaPredicted RBP19.35■□□□□ 0.69
SMARCD2-211ENST00000584483 MTHFSP49914 203 aa19.35■□□□□ 0.69
SMARCD2-211ENST00000584483 ALS2Q96Q42 1657 aa19.35■□□□□ 0.69
SMARCD2-211ENST00000584483 ABTB2Q8N961 1025 aa19.33■□□□□ 0.68
SMARCD2-211ENST00000584483 POLKQ9UBT6 870 aa19.33■□□□□ 0.68
SMARCD2-211ENST00000584483 NHSL1Q5SYE7 1610 aa19.33■□□□□ 0.68
SMARCD2-211ENST00000584483 NPHP3Q7Z494 1330 aa19.32■□□□□ 0.68
SMARCD2-211ENST00000584483 NLRP6P59044 892 aa19.32■□□□□ 0.68
SMARCD2-211ENST00000584483 AATKQ6ZMQ8 1374 aa19.32■□□□□ 0.68
SMARCD2-211ENST00000584483 ROBO1Q9Y6N7 1651 aa19.31■□□□□ 0.68
SMARCD2-211ENST00000584483 FAM9BQ8IZU0 186 aa19.31■□□□□ 0.68
SMARCD2-211ENST00000584483 EMILIN1Q9Y6C2 1016 aa19.3■□□□□ 0.68
SMARCD2-211ENST00000584483 SBNO1A3KN83 1393 aa19.3■□□□□ 0.68
SMARCD2-211ENST00000584483 SHPRHQ149N8 1683 aa19.3■□□□□ 0.68
SMARCD2-211ENST00000584483 COL3A1P02461 1466 aaPredicted RBP19.29■□□□□ 0.68
SMARCD2-211ENST00000584483 SOS2Q07890 1332 aaPredicted RBP19.29■□□□□ 0.68
SMARCD2-211ENST00000584483 RRS1Q15050 365 aaKnown RBP19.29■□□□□ 0.68
SMARCD2-211ENST00000584483 PEAK1Q9H792 1746 aa19.28■□□□□ 0.68
SMARCD2-211ENST00000584483 SMG6Q86US8 1419 aaKnown RBP19.28■□□□□ 0.68
SMARCD2-211ENST00000584483 YTHDC1Q96MU7 727 aaKnown RBP19.28■□□□□ 0.68
SMARCD2-211ENST00000584483 MED1Q15648 1581 aaPredicted RBP19.27■□□□□ 0.68
SMARCD2-211ENST00000584483 SPATA31A3Q5VYP0 1347 aa19.27■□□□□ 0.68
SMARCD2-211ENST00000584483 PNPLA6Q8IY17 1366 aa19.27■□□□□ 0.68
SMARCD2-211ENST00000584483 SLIT3O75094 1523 aa19.26■□□□□ 0.67
SMARCD2-211ENST00000584483 SOX12O15370 315 aa19.26■□□□□ 0.67
SMARCD2-211ENST00000584483 USP19O94966 1318 aa19.25■□□□□ 0.67
SMARCD2-211ENST00000584483 TNS3Q68CZ2 1445 aa19.25■□□□□ 0.67
SMARCD2-211ENST00000584483 NFAT5O94916 1531 aa19.25■□□□□ 0.67
SMARCD2-211ENST00000584483 CRYBG1Q9Y4K1 1723 aa19.25■□□□□ 0.67
SMARCD2-211ENST00000584483 INSRP06213 1382 aa19.25■□□□□ 0.67
SMARCD2-211ENST00000584483 LMOD2Q6P5Q4 547 aa19.25■□□□□ 0.67
SMARCD2-211ENST00000584483 CERKQ8TCT0 537 aa19.25■□□□□ 0.67
SMARCD2-211ENST00000584483 IQSEC2Q5JU85 1478 aa19.24■□□□□ 0.67
SMARCD2-211ENST00000584483 MAP3K19Q56UN5 1328 aa19.24■□□□□ 0.67
SMARCD2-211ENST00000584483 AHDC1Q5TGY3 1603 aaPredicted RBP19.23■□□□□ 0.67
SMARCD2-211ENST00000584483 ADAMTS8Q9UP79 889 aa19.23■□□□□ 0.67
SMARCD2-211ENST00000584483 PPM1GO15355 546 aaPredicted RBP19.22■□□□□ 0.67
SMARCD2-211ENST00000584483 CDK12Q9NYV4 1490 aaPredicted RBP19.22■□□□□ 0.67
SMARCD2-211ENST00000584483 PHRF1Q9P1Y6 1649 aaKnown RBP19.22■□□□□ 0.67
SMARCD2-211ENST00000584483 PLEKHG5O94827 1062 aa19.21■□□□□ 0.67
SMARCD2-211ENST00000584483 GCP02774 474 aa19.21■□□□□ 0.67
SMARCD2-211ENST00000584483 LTN1O94822 1766 aa19.21■□□□□ 0.67
SMARCD2-211ENST00000584483 UBAP1LF5GYI3 381 aa19.2■□□□□ 0.66
SMARCD2-211ENST00000584483 TOM1O60784 492 aa19.2■□□□□ 0.66
SMARCD2-211ENST00000584483 CABLES1Q8TDN4 633 aa19.2■□□□□ 0.66
SMARCD2-211ENST00000584483 PIP4K2BP78356 416 aa19.19■□□□□ 0.66
SMARCD2-211ENST00000584483 CFAP53Q96M91 514 aa19.19■□□□□ 0.66
SMARCD2-211ENST00000584483 HSP90AB2PQ58FF8 381 aa19.18■□□□□ 0.66
SMARCD2-211ENST00000584483 ARHGEF10O15013 1369 aa19.18■□□□□ 0.66
SMARCD2-211ENST00000584483 IL13P35225 146 aa19.17■□□□□ 0.66
SMARCD2-211ENST00000584483 PHLPP1O60346 1717 aa19.17■□□□□ 0.66
SMARCD2-211ENST00000584483 COL16A1Q07092 1604 aaPredicted RBP19.16■□□□□ 0.66
SMARCD2-211ENST00000584483 SENP3-EIF4A1A0A087X0R7 540 aa19.16■□□□□ 0.66
SMARCD2-211ENST00000584483 DIAPH1O60610 1272 aaKnown RBP19.16■□□□□ 0.66
SMARCD2-211ENST00000584483 ARHGEF25Q86VW2 580 aa19.16■□□□□ 0.66
SMARCD2-211ENST00000584483 KCNH5Q8NCM2 988 aa19.16■□□□□ 0.66
SMARCD2-211ENST00000584483 ABCA3Q99758 1704 aa19.16■□□□□ 0.66
SMARCD2-211ENST00000584483 BLMP54132 1417 aaPredicted RBP19.16■□□□□ 0.66
SMARCD2-211ENST00000584483 WDR43Q15061 677 aaKnown RBP eCLIP19.15■□□□□ 0.66
SMARCD2-211ENST00000584483 HOXC9P31274 260 aa19.14■□□□□ 0.65
SMARCD2-211ENST00000584483 EIF4A2Q14240 407 aaKnown RBP19.14■□□□□ 0.65
SMARCD2-211ENST00000584483 AMPHP49418 695 aa19.13■□□□□ 0.65
SMARCD2-211ENST00000584483 ZC3H6P61129 1189 aaKnown RBP19.13■□□□□ 0.65
SMARCD2-211ENST00000584483 HNRNPUQ00839 825 aaKnown RBP eCLIP19.13■□□□□ 0.65
SMARCD2-211ENST00000584483 FLT4P35916 1363 aa19.13■□□□□ 0.65
SMARCD2-211ENST00000584483 COL18A1P39060 1754 aa19.13■□□□□ 0.65
SMARCD2-211ENST00000584483 RGPD5Q99666 1765 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms