RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 NPHP1O15259 732 aa12.4□□□□□ -0.42
CDH8-211ENST00000584337 ARGLU1Q9NWB6 273 aaPredicted RBP12.39□□□□□ -0.43
CDH8-211ENST00000584337 PAXBP1Q9Y5B6 917 aa12.39□□□□□ -0.43
CDH8-211ENST00000584337 SMTNL1A8MU46 457 aa12.39□□□□□ -0.43
CDH8-211ENST00000584337 FAM193AP78312 1265 aa12.39□□□□□ -0.43
CDH8-211ENST00000584337 BMS1Q14692 1282 aaKnown RBP12.39□□□□□ -0.43
CDH8-211ENST00000584337 PER1O15534 1290 aaPredicted RBP12.39□□□□□ -0.43
CDH8-211ENST00000584337 WWC1Q8IX03 1113 aa12.39□□□□□ -0.43
CDH8-211ENST00000584337 ZNF622Q969S3 477 aaKnown RBP eCLIP12.38□□□□□ -0.43
CDH8-211ENST00000584337 CFAP53Q96M91 514 aa12.38□□□□□ -0.43
CDH8-211ENST00000584337 TMX1Q9H3N1 280 aa12.38□□□□□ -0.43
CDH8-211ENST00000584337 SPINK5Q9NQ38 1064 aaPredicted RBP12.38□□□□□ -0.43
CDH8-211ENST00000584337 C10orf67Q8IYJ2 551 aa12.38□□□□□ -0.43
CDH8-211ENST00000584337 RTF1Q92541 710 aaKnown RBP12.38□□□□□ -0.43
CDH8-211ENST00000584337 MYCBPQ99417 103 aaPredicted RBP12.38□□□□□ -0.43
CDH8-211ENST00000584337 DDX41Q9UJV9 622 aaKnown RBP12.38□□□□□ -0.43
CDH8-211ENST00000584337 CCDC144AA2RUR9 1427 aa12.38□□□□□ -0.43
CDH8-211ENST00000584337 NRDCO43847 1150 aa12.38□□□□□ -0.43
CDH8-211ENST00000584337 TXLNBQ8N3L3 684 aa12.38□□□□□ -0.43
CDH8-211ENST00000584337 SLFN14P0C7P3 912 aa12.37□□□□□ -0.43
CDH8-211ENST00000584337 MCCP23508 829 aa12.37□□□□□ -0.43
CDH8-211ENST00000584337 CHD1LQ86WJ1 897 aa12.37□□□□□ -0.43
CDH8-211ENST00000584337 TOMM22Q9NS69 142 aa12.37□□□□□ -0.43
CDH8-211ENST00000584337 DDIT3P35638 169 aa12.37□□□□□ -0.43
CDH8-211ENST00000584337 NOL8Q76FK4 1167 aaKnown RBP12.37□□□□□ -0.43
CDH8-211ENST00000584337 ANKRD7Q92527 254 aa12.37□□□□□ -0.43
CDH8-211ENST00000584337 NUP155O75694 1391 aa12.37□□□□□ -0.43
CDH8-211ENST00000584337 NLRP1Q9C000 1473 aa12.37□□□□□ -0.43
CDH8-211ENST00000584337 CLEC17AQ6ZS10 378 aa12.37□□□□□ -0.43
CDH8-211ENST00000584337 GPT2Q8TD30 523 aa12.37□□□□□ -0.43
CDH8-211ENST00000584337 AK7Q96M32 723 aa12.37□□□□□ -0.43
CDH8-211ENST00000584337 FGD5Q6ZNL6 1462 aa12.36□□□□□ -0.43
CDH8-211ENST00000584337 RLBP1P12271 317 aa12.36□□□□□ -0.43
CDH8-211ENST00000584337 HCLS1P14317 486 aaPredicted RBP12.36□□□□□ -0.43
CDH8-211ENST00000584337 BMP2KLQ5H9B9 411 aa12.36□□□□□ -0.43
CDH8-211ENST00000584337 RNF20Q5VTR2 975 aa12.36□□□□□ -0.43
CDH8-211ENST00000584337 BANK1Q8NDB2 785 aa12.36□□□□□ -0.43
CDH8-211ENST00000584337 CTNNA3Q9UI47 895 aa12.36□□□□□ -0.43
CDH8-211ENST00000584337 BCCIPQ9P287 314 aaKnown RBP eCLIP12.36□□□□□ -0.43
CDH8-211ENST00000584337 KIAA1107Q9UPP5 1409 aa12.36□□□□□ -0.43
CDH8-211ENST00000584337 SAFB2Q14151 953 aaKnown RBP eCLIP12.36□□□□□ -0.43
CDH8-211ENST00000584337 GOLGA6L4A6NEF3 574 aa12.35□□□□□ -0.43
CDH8-211ENST00000584337 POLR3GO15318 223 aaPredicted RBP12.35□□□□□ -0.43
CDH8-211ENST00000584337 HAP1P54257 671 aaPredicted RBP12.35□□□□□ -0.43
CDH8-211ENST00000584337 SRPK2P78362 688 aaKnown RBP12.35□□□□□ -0.43
CDH8-211ENST00000584337 CCDC183Q5T5S1 534 aa12.35□□□□□ -0.43
CDH8-211ENST00000584337 SLC26A8Q96RN1 970 aa12.35□□□□□ -0.43
CDH8-211ENST00000584337 HECW1Q76N89 1606 aa12.35□□□□□ -0.43
CDH8-211ENST00000584337 REC8O95072 547 aa12.35□□□□□ -0.43
CDH8-211ENST00000584337 HDAC1Q13547 482 aaPredicted RBP12.35□□□□□ -0.43
CDH8-211ENST00000584337 INTS3Q68E01 1043 aaKnown RBP12.35□□□□□ -0.43
CDH8-211ENST00000584337 TBC1D9Q6ZT07 1266 aa12.35□□□□□ -0.43
CDH8-211ENST00000584337 CFAP43Q8NDM7 1665 aa12.34□□□□□ -0.43
CDH8-211ENST00000584337 HNRNPH2P55795 449 aaKnown RBP12.34□□□□□ -0.43
CDH8-211ENST00000584337 SYCP1Q15431 976 aa12.34□□□□□ -0.43
CDH8-211ENST00000584337 NCBP1Q09161 790 aaKnown RBP12.34□□□□□ -0.43
CDH8-211ENST00000584337 SPTLC3Q9NUV7 552 aa12.34□□□□□ -0.43
CDH8-211ENST00000584337 MORC2Q9Y6X9 1032 aaPredicted RBP12.34□□□□□ -0.43
CDH8-211ENST00000584337 ZNF521Q96K83 1311 aa12.34□□□□□ -0.43
CDH8-211ENST00000584337 KIF18AQ8NI77 898 aa12.34□□□□□ -0.43
CDH8-211ENST00000584337 CHMP4CQ96CF2 233 aa12.34□□□□□ -0.43
CDH8-211ENST00000584337 TRIM5Q9C035 493 aa12.34□□□□□ -0.43
CDH8-211ENST00000584337 YY1AP1Q9H869 796 aa12.34□□□□□ -0.43
CDH8-211ENST00000584337 GEMIN8Q9NWZ8 242 aaKnown RBP12.34□□□□□ -0.43
CDH8-211ENST00000584337 TNNQ9UQP3 1299 aa12.34□□□□□ -0.43
CDH8-211ENST00000584337 MLECQ14165 292 aa12.33□□□□□ -0.44
CDH8-211ENST00000584337 LEKR1Q6ZMV7 388 aa12.33□□□□□ -0.44
CDH8-211ENST00000584337 KDM4AO75164 1064 aa12.33□□□□□ -0.44
CDH8-211ENST00000584337 CD2BP2O95400 341 aaKnown RBP12.33□□□□□ -0.44
CDH8-211ENST00000584337 CALRP27797 417 aaKnown RBP12.33□□□□□ -0.44
CDH8-211ENST00000584337 TRMT2AQ8IZ69 625 aaKnown RBP12.33□□□□□ -0.44
CDH8-211ENST00000584337 FEZ2Q9UHY8 353 aaPredicted RBP12.33□□□□□ -0.44
CDH8-211ENST00000584337 ATP6V1DQ9Y5K8 247 aa12.33□□□□□ -0.44
CDH8-211ENST00000584337 LOC102724159A0A0B4J2E5 919 aa12.32□□□□□ -0.44
CDH8-211ENST00000584337 PWP2Q15269 919 aaKnown RBP12.32□□□□□ -0.44
CDH8-211ENST00000584337 CCDC191Q8NCU4 936 aa12.32□□□□□ -0.44
CDH8-211ENST00000584337 NCOA3Q9Y6Q9 1424 aa12.32□□□□□ -0.44
CDH8-211ENST00000584337 KIAA1524Q8TCG1 905 aa12.32□□□□□ -0.44
CDH8-211ENST00000584337 RUNDC1Q96C34 613 aa12.32□□□□□ -0.44
CDH8-211ENST00000584337 RALGAPBQ86X10 1494 aa12.32□□□□□ -0.44
CDH8-211ENST00000584337 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDH8-211ENST00000584337 V9GYY5 206 aaPredicted RBP12.32□□□□□ -0.44
CDH8-211ENST00000584337 CC2D2AQ9P2K1 1620 aa12.32□□□□□ -0.44
CDH8-211ENST00000584337 PTPN14Q15678 1187 aa12.31□□□□□ -0.44
CDH8-211ENST00000584337 CEP135Q66GS9 1140 aa12.31□□□□□ -0.44
CDH8-211ENST00000584337 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.31□□□□□ -0.44
CDH8-211ENST00000584337 CADPSQ9ULU8 1353 aa12.31□□□□□ -0.44
CDH8-211ENST00000584337 CCDC192P0DO97 292 aa12.31□□□□□ -0.44
CDH8-211ENST00000584337 MCM2P49736 904 aa12.31□□□□□ -0.44
CDH8-211ENST00000584337 NEK4P51957 841 aa12.31□□□□□ -0.44
CDH8-211ENST00000584337 KRBA2Q6ZNG9 492 aa12.31□□□□□ -0.44
CDH8-211ENST00000584337 C14orf37Q86TY3 774 aa12.31□□□□□ -0.44
CDH8-211ENST00000584337 TMCO3Q6UWJ1 677 aa12.31□□□□□ -0.44
CDH8-211ENST00000584337 RAD51AP2Q09MP3 1159 aa12.3□□□□□ -0.44
CDH8-211ENST00000584337 GCC1Q96CN9 775 aa12.3□□□□□ -0.44
CDH8-211ENST00000584337 ICE2Q659A1 982 aa12.3□□□□□ -0.44
CDH8-211ENST00000584337 GGT6Q6P531 493 aa12.3□□□□□ -0.44
CDH8-211ENST00000584337 MORC1Q86VD1 984 aa12.3□□□□□ -0.44
CDH8-211ENST00000584337 CNPY4Q8N129 248 aa12.3□□□□□ -0.44
CDH8-211ENST00000584337 TCP11L2Q8N4U5 519 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms