RNA–Protein interactions for RNA: ENST00000580886.5

EIF4A1-215, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-215ENST00000580886 COL16A1Q07092 1604 aaPredicted RBP13.8□□□□□ -0.2
EIF4A1-215ENST00000580886 KRT28Q7Z3Y7 464 aa13.8□□□□□ -0.2
EIF4A1-215ENST00000580886 NGDNQ8NEJ9 315 aaKnown RBP13.8□□□□□ -0.2
EIF4A1-215ENST00000580886 TMC1Q8TDI8 760 aa13.8□□□□□ -0.2
EIF4A1-215ENST00000580886 TTC21BQ7Z4L5 1316 aa13.8□□□□□ -0.2
EIF4A1-215ENST00000580886 TTC21AQ8NDW8 1320 aa13.8□□□□□ -0.2
EIF4A1-215ENST00000580886 USP31Q70CQ4 1352 aa13.8□□□□□ -0.2
EIF4A1-215ENST00000580886 ALS2Q96Q42 1657 aa13.79□□□□□ -0.2
EIF4A1-215ENST00000580886 HDGFL2Q7Z4V5 671 aaPredicted RBP13.79□□□□□ -0.2
EIF4A1-215ENST00000580886 SPATA31A3Q5VYP0 1347 aa13.79□□□□□ -0.2
EIF4A1-215ENST00000580886 KTN1Q86UP2 1357 aaKnown RBP13.79□□□□□ -0.2
EIF4A1-215ENST00000580886 USP54Q70EL1 1684 aa13.79□□□□□ -0.2
EIF4A1-215ENST00000580886 PSME1Q06323 249 aa13.78□□□□□ -0.2
EIF4A1-215ENST00000580886 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
EIF4A1-215ENST00000580886 DDX17Q92841 729 aaKnown RBP13.78□□□□□ -0.2
EIF4A1-215ENST00000580886 TNS3Q68CZ2 1445 aa13.76□□□□□ -0.21
EIF4A1-215ENST00000580886 FYB1O15117 783 aa13.76□□□□□ -0.21
EIF4A1-215ENST00000580886 PIP4K2BP78356 416 aa13.76□□□□□ -0.21
EIF4A1-215ENST00000580886 LRRC59Q96AG4 307 aaKnown RBP13.76□□□□□ -0.21
EIF4A1-215ENST00000580886 COL22A1Q8NFW1 1626 aaPredicted RBP13.75□□□□□ -0.21
EIF4A1-215ENST00000580886 MED1Q15648 1581 aaPredicted RBP13.75□□□□□ -0.21
EIF4A1-215ENST00000580886 NSD3Q9BZ95 1437 aa13.75□□□□□ -0.21
EIF4A1-215ENST00000580886 OVOS2A0A0J9YW53 1432 aa13.74□□□□□ -0.21
EIF4A1-215ENST00000580886 OVOS2Q6IE36 1432 aa13.74□□□□□ -0.21
EIF4A1-215ENST00000580886 ARHGEF10O15013 1369 aa13.74□□□□□ -0.21
EIF4A1-215ENST00000580886 NSD2O96028 1365 aa13.74□□□□□ -0.21
EIF4A1-215ENST00000580886 USP19O94966 1318 aa13.74□□□□□ -0.21
EIF4A1-215ENST00000580886 PHLPP1O60346 1717 aa13.74□□□□□ -0.21
EIF4A1-215ENST00000580886 PIK3C2AO00443 1686 aa13.74□□□□□ -0.21
EIF4A1-215ENST00000580886 MARF1Q9Y4F3 1742 aaKnown RBP13.73□□□□□ -0.21
EIF4A1-215ENST00000580886 PNPLA6Q8IY17 1366 aa13.73□□□□□ -0.21
EIF4A1-215ENST00000580886 HSPA1LP34931 641 aa13.73□□□□□ -0.21
EIF4A1-215ENST00000580886 DDX10Q13206 875 aaKnown RBP13.73□□□□□ -0.21
EIF4A1-215ENST00000580886 SCAF1Q9H7N4 1312 aaKnown RBP13.72□□□□□ -0.21
EIF4A1-215ENST00000580886 XPCQ01831 940 aaPredicted RBP13.72□□□□□ -0.21
EIF4A1-215ENST00000580886 POLR3GLQ9BT43 218 aa13.72□□□□□ -0.21
EIF4A1-215ENST00000580886 SLIT3O75094 1523 aa13.72□□□□□ -0.21
EIF4A1-215ENST00000580886 CRYBG1Q9Y4K1 1723 aa13.72□□□□□ -0.21
EIF4A1-215ENST00000580886 CGNL1Q0VF96 1302 aa13.71□□□□□ -0.21
EIF4A1-215ENST00000580886 SHPRHQ149N8 1683 aa13.71□□□□□ -0.21
EIF4A1-215ENST00000580886 JCADQ9P266 1359 aa13.71□□□□□ -0.22
EIF4A1-215ENST00000580886 NME9Q86XW9 330 aa13.7□□□□□ -0.22
EIF4A1-215ENST00000580886 KNSTRNQ9Y448 316 aa13.7□□□□□ -0.22
EIF4A1-215ENST00000580886 ABTB2Q8N961 1025 aa13.69□□□□□ -0.22
EIF4A1-215ENST00000580886 NLRP13Q86W25 1043 aa13.68□□□□□ -0.22
EIF4A1-215ENST00000580886 ZRANB1Q9UGI0 708 aa13.68□□□□□ -0.22
EIF4A1-215ENST00000580886 NFAT5O94916 1531 aa13.68□□□□□ -0.22
EIF4A1-215ENST00000580886 AATKQ6ZMQ8 1374 aa13.68□□□□□ -0.22
EIF4A1-215ENST00000580886 ANKRD26Q9UPS8 1709 aa13.67□□□□□ -0.22
EIF4A1-215ENST00000580886 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.67□□□□□ -0.22
EIF4A1-215ENST00000580886 CPDO75976 1380 aa13.67□□□□□ -0.22
EIF4A1-215ENST00000580886 PARD3Q8TEW0 1356 aa13.67□□□□□ -0.22
EIF4A1-215ENST00000580886 KIF20BQ96Q89 1820 aa13.67□□□□□ -0.22
EIF4A1-215ENST00000580886 SPATA31A6Q5VVP1 1343 aa13.66□□□□□ -0.22
EIF4A1-215ENST00000580886 NLRP6P59044 892 aa13.66□□□□□ -0.22
EIF4A1-215ENST00000580886 ABCA3Q99758 1704 aa13.65□□□□□ -0.22
EIF4A1-215ENST00000580886 PAK3O75914 559 aaPredicted RBP13.65□□□□□ -0.22
EIF4A1-215ENST00000580886 GCP02774 474 aa13.65□□□□□ -0.22
EIF4A1-215ENST00000580886 GGNBP2Q9H3C7 697 aa13.65□□□□□ -0.22
EIF4A1-215ENST00000580886 PHRF1Q9P1Y6 1649 aaKnown RBP13.64□□□□□ -0.23
EIF4A1-215ENST00000580886 KCNH5Q8NCM2 988 aa13.64□□□□□ -0.23
EIF4A1-215ENST00000580886 COG3Q96JB2 828 aa13.64□□□□□ -0.23
EIF4A1-215ENST00000580886 SMG6Q86US8 1419 aaKnown RBP13.64□□□□□ -0.23
EIF4A1-215ENST00000580886 INSRP06213 1382 aa13.63□□□□□ -0.23
EIF4A1-215ENST00000580886 KIF24Q5T7B8 1368 aa13.63□□□□□ -0.23
EIF4A1-215ENST00000580886 ARHGEF25Q86VW2 580 aa13.63□□□□□ -0.23
EIF4A1-215ENST00000580886 ABCC6O95255 1503 aa13.63□□□□□ -0.23
EIF4A1-215ENST00000580886 RALBP1Q15311 655 aa13.61□□□□□ -0.23
EIF4A1-215ENST00000580886 NUTM2GQ5VZR2 741 aa13.61□□□□□ -0.23
EIF4A1-215ENST00000580886 CABLES1Q8TDN4 633 aa13.61□□□□□ -0.23
EIF4A1-215ENST00000580886 PRKRIP1Q9H875 184 aaPredicted RBP13.61□□□□□ -0.23
EIF4A1-215ENST00000580886 LRP6O75581 1613 aa13.61□□□□□ -0.23
EIF4A1-215ENST00000580886 COL18A1P39060 1754 aa13.6□□□□□ -0.23
EIF4A1-215ENST00000580886 POLKQ9UBT6 870 aa13.6□□□□□ -0.23
EIF4A1-215ENST00000580886 MORC1Q86VD1 984 aa13.59□□□□□ -0.23
EIF4A1-215ENST00000580886 LMO7Q8WWI1 1683 aa13.59□□□□□ -0.23
EIF4A1-215ENST00000580886 CC2D1BQ5T0F9 858 aaKnown RBP13.58□□□□□ -0.24
EIF4A1-215ENST00000580886 LMOD2Q6P5Q4 547 aa13.58□□□□□ -0.24
EIF4A1-215ENST00000580886 MAP3K19Q56UN5 1328 aa13.58□□□□□ -0.24
EIF4A1-215ENST00000580886 RTL1A6NKG5 1358 aa13.58□□□□□ -0.24
EIF4A1-215ENST00000580886 FAM83GA6ND36 823 aa13.57□□□□□ -0.24
EIF4A1-215ENST00000580886 FBLN1P23142 703 aa13.57□□□□□ -0.24
EIF4A1-215ENST00000580886 FNBP4Q8N3X1 1017 aaPredicted RBP13.57□□□□□ -0.24
EIF4A1-215ENST00000580886 SLIT2O94813 1529 aa13.57□□□□□ -0.24
EIF4A1-215ENST00000580886 KIAA0232Q92628 1395 aa13.57□□□□□ -0.24
EIF4A1-215ENST00000580886 PPP2R1AP30153 589 aa13.56□□□□□ -0.24
EIF4A1-215ENST00000580886 IP6K1Q92551 441 aa13.56□□□□□ -0.24
EIF4A1-215ENST00000580886 PEAK1Q9H792 1746 aa13.56□□□□□ -0.24
EIF4A1-215ENST00000580886 BLMP54132 1417 aaPredicted RBP13.55□□□□□ -0.24
EIF4A1-215ENST00000580886 CDK12Q9NYV4 1490 aaPredicted RBP13.55□□□□□ -0.24
EIF4A1-215ENST00000580886 CAMTA1Q9Y6Y1 1673 aa13.54□□□□□ -0.24
EIF4A1-215ENST00000580886 COL14A1Q05707 1796 aaKnown RBP13.54□□□□□ -0.24
EIF4A1-215ENST00000580886 AXIN2Q9Y2T1 843 aa13.54□□□□□ -0.24
EIF4A1-215ENST00000580886 COL3A1P02461 1466 aaPredicted RBP13.54□□□□□ -0.24
EIF4A1-215ENST00000580886 MAP2P11137 1827 aaKnown RBP13.53□□□□□ -0.24
EIF4A1-215ENST00000580886 HOXC9P31274 260 aa13.53□□□□□ -0.24
EIF4A1-215ENST00000580886 MTHFSP49914 203 aa13.53□□□□□ -0.24
EIF4A1-215ENST00000580886 ZC3H6P61129 1189 aaKnown RBP13.53□□□□□ -0.24
EIF4A1-215ENST00000580886 RRS1Q15050 365 aaKnown RBP13.53□□□□□ -0.24
EIF4A1-215ENST00000580886 DIEXFQ68CQ4 756 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms