RNA–Protein interactions for RNA: ENST00000578537.1

CTC1-205, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-205ENST00000578537 PHF8Q9UPP1 1060 aa17.88■□□□□ 0.45
CTC1-205ENST00000578537 CRYBG1Q9Y4K1 1723 aa17.87■□□□□ 0.45
CTC1-205ENST00000578537 ESCO1Q5FWF5 840 aa17.87■□□□□ 0.45
CTC1-205ENST00000578537 BRINP3Q76B58 766 aa17.87■□□□□ 0.45
CTC1-205ENST00000578537 AHDC1Q5TGY3 1603 aaPredicted RBP17.87■□□□□ 0.45
CTC1-205ENST00000578537 KTN1Q86UP2 1357 aaKnown RBP17.86■□□□□ 0.45
CTC1-205ENST00000578537 EDC4Q6P2E9 1401 aaKnown RBP17.85■□□□□ 0.45
CTC1-205ENST00000578537 ABCA3Q99758 1704 aa17.85■□□□□ 0.45
CTC1-205ENST00000578537 SLAIN2Q9P270 581 aa17.85■□□□□ 0.45
CTC1-205ENST00000578537 COL16A1Q07092 1604 aaPredicted RBP17.84■□□□□ 0.45
CTC1-205ENST00000578537 XPCQ01831 940 aaPredicted RBP17.84■□□□□ 0.45
CTC1-205ENST00000578537 JCADQ9P266 1359 aa17.82■□□□□ 0.44
CTC1-205ENST00000578537 AMER1Q5JTC6 1135 aaPredicted RBP17.82■□□□□ 0.44
CTC1-205ENST00000578537 PHRF1Q9P1Y6 1649 aaKnown RBP17.81■□□□□ 0.44
CTC1-205ENST00000578537 FOXO3O43524 673 aa17.81■□□□□ 0.44
CTC1-205ENST00000578537 NGDNQ8NEJ9 315 aaKnown RBP17.81■□□□□ 0.44
CTC1-205ENST00000578537 TERF2IPQ9NYB0 399 aa17.81■□□□□ 0.44
CTC1-205ENST00000578537 ZRANB1Q9UGI0 708 aa17.81■□□□□ 0.44
CTC1-205ENST00000578537 DIEXFQ68CQ4 756 aaKnown RBP17.8■□□□□ 0.44
CTC1-205ENST00000578537 HDGFL2Q7Z4V5 671 aaPredicted RBP17.8■□□□□ 0.44
CTC1-205ENST00000578537 TTC21BQ7Z4L5 1316 aa17.79■□□□□ 0.44
CTC1-205ENST00000578537 NME9Q86XW9 330 aa17.79■□□□□ 0.44
CTC1-205ENST00000578537 OVOS2A0A0J9YW53 1432 aa17.79■□□□□ 0.44
CTC1-205ENST00000578537 OVOS2Q6IE36 1432 aa17.79■□□□□ 0.44
CTC1-205ENST00000578537 CNGB1Q14028 1251 aaPredicted RBP17.78■□□□□ 0.44
CTC1-205ENST00000578537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.78■□□□□ 0.44
CTC1-205ENST00000578537 UPF1Q92900 1129 aaKnown RBP eCLIP17.78■□□□□ 0.44
CTC1-205ENST00000578537 LRP6O75581 1613 aa17.76■□□□□ 0.43
CTC1-205ENST00000578537 TNS3Q68CZ2 1445 aa17.76■□□□□ 0.43
CTC1-205ENST00000578537 CC2D1BQ5T0F9 858 aaKnown RBP17.76■□□□□ 0.43
CTC1-205ENST00000578537 MAP2P11137 1827 aaKnown RBP17.76■□□□□ 0.43
CTC1-205ENST00000578537 PARD3Q8TEW0 1356 aa17.76■□□□□ 0.43
CTC1-205ENST00000578537 NPC1L1Q9UHC9 1359 aa17.76■□□□□ 0.43
CTC1-205ENST00000578537 FYB1O15117 783 aa17.75■□□□□ 0.43
CTC1-205ENST00000578537 KRT28Q7Z3Y7 464 aa17.75■□□□□ 0.43
CTC1-205ENST00000578537 GGNBP2Q9H3C7 697 aa17.75■□□□□ 0.43
CTC1-205ENST00000578537 KNSTRNQ9Y448 316 aa17.75■□□□□ 0.43
CTC1-205ENST00000578537 LTN1O94822 1766 aa17.75■□□□□ 0.43
CTC1-205ENST00000578537 SOS2Q07890 1332 aaPredicted RBP17.74■□□□□ 0.43
CTC1-205ENST00000578537 NPHP3Q7Z494 1330 aa17.74■□□□□ 0.43
CTC1-205ENST00000578537 SLIT3O75094 1523 aa17.74■□□□□ 0.43
CTC1-205ENST00000578537 ZNF692Q9BU19 519 aaPredicted RBP17.74■□□□□ 0.43
CTC1-205ENST00000578537 PEAK1Q9H792 1746 aa17.74■□□□□ 0.43
CTC1-205ENST00000578537 SHPRHQ149N8 1683 aa17.74■□□□□ 0.43
CTC1-205ENST00000578537 SPATA31A6Q5VVP1 1343 aa17.73■□□□□ 0.43
CTC1-205ENST00000578537 COL22A1Q8NFW1 1626 aaPredicted RBP17.73■□□□□ 0.43
CTC1-205ENST00000578537 ZNF772Q68DY9 489 aaPredicted RBP17.73■□□□□ 0.43
CTC1-205ENST00000578537 SBNO1A3KN83 1393 aa17.73■□□□□ 0.43
CTC1-205ENST00000578537 NFAT5O94916 1531 aa17.72■□□□□ 0.43
CTC1-205ENST00000578537 USP31Q70CQ4 1352 aa17.72■□□□□ 0.43
CTC1-205ENST00000578537 PSME1Q06323 249 aa17.72■□□□□ 0.43
CTC1-205ENST00000578537 NUTM2GQ5VZR2 741 aa17.72■□□□□ 0.43
CTC1-205ENST00000578537 CGNL1Q0VF96 1302 aa17.72■□□□□ 0.43
CTC1-205ENST00000578537 TTC21AQ8NDW8 1320 aa17.72■□□□□ 0.43
CTC1-205ENST00000578537 BRD4O60885 1362 aaPredicted RBP17.71■□□□□ 0.43
CTC1-205ENST00000578537 NSD2O96028 1365 aa17.71■□□□□ 0.43
CTC1-205ENST00000578537 MEX3CQ5U5Q3 659 aaKnown RBP17.71■□□□□ 0.43
CTC1-205ENST00000578537 SPATA31A3Q5VYP0 1347 aa17.71■□□□□ 0.42
CTC1-205ENST00000578537 PRKRIP1Q9H875 184 aaPredicted RBP17.7■□□□□ 0.42
CTC1-205ENST00000578537 RGPD5Q99666 1765 aa17.69■□□□□ 0.42
CTC1-205ENST00000578537 PAK3O75914 559 aaPredicted RBP17.69■□□□□ 0.42
CTC1-205ENST00000578537 FBLN1P23142 703 aa17.68■□□□□ 0.42
CTC1-205ENST00000578537 MIER1Q8N108 512 aa17.68■□□□□ 0.42
CTC1-205ENST00000578537 USP19O94966 1318 aa17.67■□□□□ 0.42
CTC1-205ENST00000578537 RXRBP28702 533 aa17.66■□□□□ 0.42
CTC1-205ENST00000578537 COL18A1P39060 1754 aa17.66■□□□□ 0.42
CTC1-205ENST00000578537 PNPLA6Q8IY17 1366 aa17.66■□□□□ 0.42
CTC1-205ENST00000578537 CDK12Q9NYV4 1490 aaPredicted RBP17.65■□□□□ 0.42
CTC1-205ENST00000578537 CCDC184Q52MB2 194 aa17.65■□□□□ 0.42
CTC1-205ENST00000578537 ABTB2Q8N961 1025 aa17.65■□□□□ 0.42
CTC1-205ENST00000578537 PLEKHG5O94827 1062 aa17.64■□□□□ 0.41
CTC1-205ENST00000578537 TNNT2P45379 298 aaPredicted RBP17.64■□□□□ 0.41
CTC1-205ENST00000578537 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.41
CTC1-205ENST00000578537 COL3A1P02461 1466 aaPredicted RBP17.63■□□□□ 0.41
CTC1-205ENST00000578537 ANP32CO43423 234 aa17.63■□□□□ 0.41
CTC1-205ENST00000578537 NLRP6P59044 892 aa17.63■□□□□ 0.41
CTC1-205ENST00000578537 LMOD2Q6P5Q4 547 aa17.63■□□□□ 0.41
CTC1-205ENST00000578537 MORC1Q86VD1 984 aa17.63■□□□□ 0.41
CTC1-205ENST00000578537 RGPD2P0DJD1 1756 aa17.62■□□□□ 0.41
CTC1-205ENST00000578537 PPP2R1AP30153 589 aa17.62■□□□□ 0.41
CTC1-205ENST00000578537 CABLES1Q8TDN4 633 aa17.62■□□□□ 0.41
CTC1-205ENST00000578537 ARHGEF10O15013 1369 aa17.62■□□□□ 0.41
CTC1-205ENST00000578537 SRCAPQ6ZRS2 3230 aa17.61■□□□□ 0.41
CTC1-205ENST00000578537 SOX12O15370 315 aa17.61■□□□□ 0.41
CTC1-205ENST00000578537 COG3Q96JB2 828 aa17.61■□□□□ 0.41
CTC1-205ENST00000578537 RALBP1Q15311 655 aa17.6■□□□□ 0.41
CTC1-205ENST00000578537 MYBBP1AQ9BQG0 1328 aaKnown RBP17.6■□□□□ 0.41
CTC1-205ENST00000578537 LMO7Q8WWI1 1683 aa17.6■□□□□ 0.41
CTC1-205ENST00000578537 PLCH1Q4KWH8 1693 aa17.59■□□□□ 0.41
CTC1-205ENST00000578537 AATKQ6ZMQ8 1374 aa17.59■□□□□ 0.41
CTC1-205ENST00000578537 EMILIN1Q9Y6C2 1016 aa17.59■□□□□ 0.41
CTC1-205ENST00000578537 NUTM2BA6NNL0 878 aaPredicted RBP17.58■□□□□ 0.4
CTC1-205ENST00000578537 NUTM2EB1AL46 878 aaPredicted RBP17.58■□□□□ 0.4
CTC1-205ENST00000578537 RRS1Q15050 365 aaKnown RBP17.58■□□□□ 0.4
CTC1-205ENST00000578537 NUTM2AQ8IVF1 878 aaPredicted RBP17.58■□□□□ 0.4
CTC1-205ENST00000578537 AFF2P51816 1311 aa17.57■□□□□ 0.4
CTC1-205ENST00000578537 NLRP13Q86W25 1043 aa17.57■□□□□ 0.4
CTC1-205ENST00000578537 RGPD1P0DJD0 1748 aa17.57■□□□□ 0.4
CTC1-205ENST00000578537 MAP3K19Q56UN5 1328 aa17.56■□□□□ 0.4
CTC1-205ENST00000578537 POLKQ9UBT6 870 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms