RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 CC2D1BQ5T0F9 858 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-205ENST00000577802 PMFBP1Q8TBY8 1022 aa18■□□□□ 0.47
CDK5RAP3-205ENST00000577802 NPHP3Q7Z494 1330 aa17.98■□□□□ 0.47
CDK5RAP3-205ENST00000577802 SSH2Q76I76 1423 aa17.98■□□□□ 0.47
CDK5RAP3-205ENST00000577802 PIK3C2AO00443 1686 aa17.97■□□□□ 0.47
CDK5RAP3-205ENST00000577802 MORC1Q86VD1 984 aa17.97■□□□□ 0.47
CDK5RAP3-205ENST00000577802 NLRP13Q86W25 1043 aa17.97■□□□□ 0.47
CDK5RAP3-205ENST00000577802 TRPM3Q9HCF6 1732 aaPredicted RBP17.97■□□□□ 0.47
CDK5RAP3-205ENST00000577802 TTC21BQ7Z4L5 1316 aa17.97■□□□□ 0.47
CDK5RAP3-205ENST00000577802 NHSL1Q5SYE7 1610 aa17.96■□□□□ 0.47
CDK5RAP3-205ENST00000577802 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.46
CDK5RAP3-205ENST00000577802 PSME1Q06323 249 aa17.95■□□□□ 0.46
CDK5RAP3-205ENST00000577802 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.95■□□□□ 0.46
CDK5RAP3-205ENST00000577802 COG3Q96JB2 828 aa17.95■□□□□ 0.46
CDK5RAP3-205ENST00000577802 SLAIN2Q9P270 581 aa17.95■□□□□ 0.46
CDK5RAP3-205ENST00000577802 CNGB1Q14028 1251 aaPredicted RBP17.94■□□□□ 0.46
CDK5RAP3-205ENST00000577802 ORAI2Q96SN7 254 aa17.94■□□□□ 0.46
CDK5RAP3-205ENST00000577802 OVOS2A0A0J9YW53 1432 aa17.94■□□□□ 0.46
CDK5RAP3-205ENST00000577802 OVOS2Q6IE36 1432 aa17.94■□□□□ 0.46
CDK5RAP3-205ENST00000577802 USP31Q70CQ4 1352 aa17.93■□□□□ 0.46
CDK5RAP3-205ENST00000577802 FYB1O15117 783 aa17.93■□□□□ 0.46
CDK5RAP3-205ENST00000577802 SBNO1A3KN83 1393 aa17.92■□□□□ 0.46
CDK5RAP3-205ENST00000577802 GGNBP2Q9H3C7 697 aa17.92■□□□□ 0.46
CDK5RAP3-205ENST00000577802 ROBO1Q9Y6N7 1651 aa17.92■□□□□ 0.46
CDK5RAP3-205ENST00000577802 ALS2Q96Q42 1657 aa17.91■□□□□ 0.46
CDK5RAP3-205ENST00000577802 PXDNQ92626 1479 aa17.91■□□□□ 0.46
CDK5RAP3-205ENST00000577802 AHDC1Q5TGY3 1603 aaPredicted RBP17.9■□□□□ 0.46
CDK5RAP3-205ENST00000577802 TNS3Q68CZ2 1445 aa17.9■□□□□ 0.46
CDK5RAP3-205ENST00000577802 TOM1O60784 492 aa17.9■□□□□ 0.46
CDK5RAP3-205ENST00000577802 BRINP3Q76B58 766 aa17.9■□□□□ 0.46
CDK5RAP3-205ENST00000577802 NME9Q86XW9 330 aa17.9■□□□□ 0.46
CDK5RAP3-205ENST00000577802 MRS2Q9HD23 443 aa17.9■□□□□ 0.46
CDK5RAP3-205ENST00000577802 ARHGEF10O15013 1369 aa17.9■□□□□ 0.46
CDK5RAP3-205ENST00000577802 AATKQ6ZMQ8 1374 aa17.9■□□□□ 0.46
CDK5RAP3-205ENST00000577802 FOXO3O43524 673 aa17.89■□□□□ 0.45
CDK5RAP3-205ENST00000577802 PAK3O75914 559 aaPredicted RBP17.89■□□□□ 0.45
CDK5RAP3-205ENST00000577802 PPP2R1AP30153 589 aa17.89■□□□□ 0.45
CDK5RAP3-205ENST00000577802 SMG6Q86US8 1419 aaKnown RBP17.89■□□□□ 0.45
CDK5RAP3-205ENST00000577802 MED1Q15648 1581 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-205ENST00000577802 KRT28Q7Z3Y7 464 aa17.88■□□□□ 0.45
CDK5RAP3-205ENST00000577802 CFAP53Q96M91 514 aa17.88■□□□□ 0.45
CDK5RAP3-205ENST00000577802 MARF1Q9Y4F3 1742 aaKnown RBP17.87■□□□□ 0.45
CDK5RAP3-205ENST00000577802 ABTB2Q8N961 1025 aa17.87■□□□□ 0.45
CDK5RAP3-205ENST00000577802 CDK12Q9NYV4 1490 aaPredicted RBP17.86■□□□□ 0.45
CDK5RAP3-205ENST00000577802 SLIT3O75094 1523 aa17.86■□□□□ 0.45
CDK5RAP3-205ENST00000577802 NLRP6P59044 892 aa17.84■□□□□ 0.45
CDK5RAP3-205ENST00000577802 PHRF1Q9P1Y6 1649 aaKnown RBP17.83■□□□□ 0.45
CDK5RAP3-205ENST00000577802 KIF24Q5T7B8 1368 aa17.83■□□□□ 0.45
CDK5RAP3-205ENST00000577802 SOS2Q07890 1332 aaPredicted RBP17.83■□□□□ 0.44
CDK5RAP3-205ENST00000577802 TNNT2P45379 298 aaPredicted RBP17.83■□□□□ 0.44
CDK5RAP3-205ENST00000577802 KCNH5Q8NCM2 988 aa17.83■□□□□ 0.44
CDK5RAP3-205ENST00000577802 MAP2P11137 1827 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-205ENST00000577802 PHLPP1O60346 1717 aa17.81■□□□□ 0.44
CDK5RAP3-205ENST00000577802 RTL1A6NKG5 1358 aa17.81■□□□□ 0.44
CDK5RAP3-205ENST00000577802 USP19O94966 1318 aa17.81■□□□□ 0.44
CDK5RAP3-205ENST00000577802 CERKQ8TCT0 537 aa17.81■□□□□ 0.44
CDK5RAP3-205ENST00000577802 NFAT5O94916 1531 aa17.81■□□□□ 0.44
CDK5RAP3-205ENST00000577802 SPATA31A3Q5VYP0 1347 aa17.8■□□□□ 0.44
CDK5RAP3-205ENST00000577802 XPCQ01831 940 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP3-205ENST00000577802 ABCC6O95255 1503 aa17.8■□□□□ 0.44
CDK5RAP3-205ENST00000577802 CRYBG1Q9Y4K1 1723 aa17.8■□□□□ 0.44
CDK5RAP3-205ENST00000577802 INSRP06213 1382 aa17.79■□□□□ 0.44
CDK5RAP3-205ENST00000577802 LTN1O94822 1766 aa17.79■□□□□ 0.44
CDK5RAP3-205ENST00000577802 WDR43Q15061 677 aaKnown RBP eCLIP17.79■□□□□ 0.44
CDK5RAP3-205ENST00000577802 LMOD2Q6P5Q4 547 aa17.79■□□□□ 0.44
CDK5RAP3-205ENST00000577802 UBAP1LF5GYI3 381 aa17.78■□□□□ 0.44
CDK5RAP3-205ENST00000577802 MTHFSP49914 203 aa17.78■□□□□ 0.44
CDK5RAP3-205ENST00000577802 ABCA3Q99758 1704 aa17.78■□□□□ 0.44
CDK5RAP3-205ENST00000577802 FLT4P35916 1363 aa17.78■□□□□ 0.44
CDK5RAP3-205ENST00000577802 SHPRHQ149N8 1683 aa17.77■□□□□ 0.44
CDK5RAP3-205ENST00000577802 COL16A1Q07092 1604 aaPredicted RBP17.77■□□□□ 0.44
CDK5RAP3-205ENST00000577802 COL22A1Q8NFW1 1626 aaPredicted RBP17.77■□□□□ 0.44
CDK5RAP3-205ENST00000577802 ZRANB1Q9UGI0 708 aa17.77■□□□□ 0.44
CDK5RAP3-205ENST00000577802 COL3A1P02461 1466 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-205ENST00000577802 NUDCQ9Y266 331 aa17.76■□□□□ 0.43
CDK5RAP3-205ENST00000577802 PNPLA6Q8IY17 1366 aa17.76■□□□□ 0.43
CDK5RAP3-205ENST00000577802 POLKQ9UBT6 870 aa17.75■□□□□ 0.43
CDK5RAP3-205ENST00000577802 NUTM2GQ5VZR2 741 aa17.74■□□□□ 0.43
CDK5RAP3-205ENST00000577802 LRRC59Q96AG4 307 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP3-205ENST00000577802 PEAK1Q9H792 1746 aa17.73■□□□□ 0.43
CDK5RAP3-205ENST00000577802 CCDC184Q52MB2 194 aa17.73■□□□□ 0.43
CDK5RAP3-205ENST00000577802 PNISRQ8TF01 805 aaKnown RBP17.73■□□□□ 0.43
CDK5RAP3-205ENST00000577802 DDX17Q92841 729 aaKnown RBP17.73■□□□□ 0.43
CDK5RAP3-205ENST00000577802 PPM1GO15355 546 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-205ENST00000577802 FAM9BQ8IZU0 186 aa17.72■□□□□ 0.43
CDK5RAP3-205ENST00000577802 BLMP54132 1417 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-205ENST00000577802 MAP3K19Q56UN5 1328 aa17.72■□□□□ 0.43
CDK5RAP3-205ENST00000577802 SOX12O15370 315 aa17.71■□□□□ 0.43
CDK5RAP3-205ENST00000577802 DIAPH1O60610 1272 aaKnown RBP17.71■□□□□ 0.43
CDK5RAP3-205ENST00000577802 AMPHP49418 695 aa17.71■□□□□ 0.43
CDK5RAP3-205ENST00000577802 PIP4K2BP78356 416 aa17.71■□□□□ 0.43
CDK5RAP3-205ENST00000577802 RRS1Q15050 365 aaKnown RBP17.71■□□□□ 0.43
CDK5RAP3-205ENST00000577802 EMILIN1Q9Y6C2 1016 aa17.71■□□□□ 0.43
CDK5RAP3-205ENST00000577802 FAM208AQ9UK61 1670 aaKnown RBP17.71■□□□□ 0.42
CDK5RAP3-205ENST00000577802 CPDO75976 1380 aa17.7■□□□□ 0.42
CDK5RAP3-205ENST00000577802 GCP02774 474 aa17.7■□□□□ 0.42
CDK5RAP3-205ENST00000577802 HAP1P54257 671 aaPredicted RBP17.7■□□□□ 0.42
CDK5RAP3-205ENST00000577802 MSH5O43196 834 aa17.69■□□□□ 0.42
CDK5RAP3-205ENST00000577802 PNNQ9H307 717 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP3-205ENST00000577802 RGPD1P0DJD0 1748 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms