RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 ARMC2Q8NEN0 867 aa5□□□□□ -1.61
COPS3-213ENST00000577210 CABLES1Q8TDN4 633 aa5□□□□□ -1.61
COPS3-213ENST00000577210 TSC1Q92574 1164 aa5□□□□□ -1.61
COPS3-213ENST00000577210 POTECB2RU33 542 aa4.99□□□□□ -1.61
COPS3-213ENST00000577210 DGAT1O75907 488 aa4.99□□□□□ -1.61
COPS3-213ENST00000577210 USP17L8P0C7I0 530 aa4.99□□□□□ -1.61
COPS3-213ENST00000577210 JUNDP17535 347 aa4.99□□□□□ -1.61
COPS3-213ENST00000577210 RPIAP49247 311 aa4.99□□□□□ -1.61
COPS3-213ENST00000577210 PTPRNQ16849 979 aa4.99□□□□□ -1.61
COPS3-213ENST00000577210 RTL5Q5HYW3 569 aaPredicted RBP4.99□□□□□ -1.61
COPS3-213ENST00000577210 TIMELESSQ9UNS1 1208 aa4.99□□□□□ -1.61
COPS3-213ENST00000577210 NDUFB9Q9Y6M9 179 aa4.99□□□□□ -1.61
COPS3-213ENST00000577210 ZC3H4Q9UPT8 1303 aaKnown RBP4.98□□□□□ -1.61
COPS3-213ENST00000577210 LYPD8Q6UX82 237 aa4.98□□□□□ -1.61
COPS3-213ENST00000577210 CFAP99D6REC4 459 aa4.97□□□□□ -1.61
COPS3-213ENST00000577210 MMP16P51512 607 aa4.97□□□□□ -1.61
COPS3-213ENST00000577210 WASHC4Q2M389 1173 aa4.97□□□□□ -1.61
COPS3-213ENST00000577210 GPKOWQ92917 476 aaPredicted RBP eCLIP4.97□□□□□ -1.61
COPS3-213ENST00000577210 TOR4AQ9NXH8 423 aa4.97□□□□□ -1.61
COPS3-213ENST00000577210 ZNF330Q9Y3S2 320 aaPredicted RBP4.97□□□□□ -1.61
COPS3-213ENST00000577210 DXOO77932 396 aaKnown RBP4.96□□□□□ -1.62
COPS3-213ENST00000577210 CTDSPL2Q05D32 466 aa4.96□□□□□ -1.62
COPS3-213ENST00000577210 TRIM32Q13049 653 aa4.96□□□□□ -1.62
COPS3-213ENST00000577210 SYMPKQ92797 1274 aaKnown RBP4.96□□□□□ -1.62
COPS3-213ENST00000577210 AAASQ9NRG9 546 aa4.96□□□□□ -1.62
COPS3-213ENST00000577210 CD2BP2O95400 341 aaKnown RBP4.95□□□□□ -1.62
COPS3-213ENST00000577210 CCNYL3P0C7X3 344 aa4.95□□□□□ -1.62
COPS3-213ENST00000577210 NBPF14Q5TI25 921 aa4.95□□□□□ -1.62
COPS3-213ENST00000577210 PROSER2Q86WR7 435 aaPredicted RBP4.95□□□□□ -1.62
COPS3-213ENST00000577210 MTMR14Q8NCE2 650 aa4.95□□□□□ -1.62
COPS3-213ENST00000577210 NUDT12Q9BQG2 462 aa4.95□□□□□ -1.62
COPS3-213ENST00000577210 SNRKQ9NRH2 765 aa4.95□□□□□ -1.62
COPS3-213ENST00000577210 EVA1BQ9NVM1 165 aa4.95□□□□□ -1.62
COPS3-213ENST00000577210 DACH1Q9UI36 760 aa4.95□□□□□ -1.62
COPS3-213ENST00000577210 SOX11P35716 441 aa4.94□□□□□ -1.62
COPS3-213ENST00000577210 MCCD1P59942 119 aaPredicted RBP4.94□□□□□ -1.62
COPS3-213ENST00000577210 CYP4X1Q8N118 509 aa4.94□□□□□ -1.62
COPS3-213ENST00000577210 TRIM52Q96A61 297 aa4.94□□□□□ -1.62
COPS3-213ENST00000577210 COG6Q9Y2V7 657 aa4.94□□□□□ -1.62
COPS3-213ENST00000577210 GPSM3Q9Y4H4 160 aa4.94□□□□□ -1.62
COPS3-213ENST00000577210 WNT7AO00755 349 aa4.93□□□□□ -1.62
COPS3-213ENST00000577210 ZBTB24O43167 697 aaPredicted RBP4.93□□□□□ -1.62
COPS3-213ENST00000577210 CTHP32929 405 aa4.93□□□□□ -1.62
COPS3-213ENST00000577210 KCNH2Q12809 1159 aa4.93□□□□□ -1.62
COPS3-213ENST00000577210 CCDC24Q8N4L8 307 aa4.93□□□□□ -1.62
COPS3-213ENST00000577210 TRAK2O60296 914 aa4.92□□□□□ -1.62
COPS3-213ENST00000577210 AVPP01185 164 aa4.92□□□□□ -1.62
COPS3-213ENST00000577210 SMPD1P17405 629 aa4.92□□□□□ -1.62
COPS3-213ENST00000577210 SKOR1P84550 965 aa4.92□□□□□ -1.62
COPS3-213ENST00000577210 CRIPAKQ8N1N5 446 aa4.92□□□□□ -1.62
COPS3-213ENST00000577210 MRGPRX2Q96LB1 330 aa4.92□□□□□ -1.62
COPS3-213ENST00000577210 GDPD2Q9HCC8 539 aa4.92□□□□□ -1.62
COPS3-213ENST00000577210 FKBPLQ9UIM3 349 aa4.92□□□□□ -1.62
COPS3-213ENST00000577210 TTC24A2A3L6 582 aaPredicted RBP4.91□□□□□ -1.62
COPS3-213ENST00000577210 J3QL48 77 aa4.91□□□□□ -1.62
COPS3-213ENST00000577210 F12P00748 615 aaPredicted RBP4.91□□□□□ -1.62
COPS3-213ENST00000577210 ABL2P42684 1182 aa4.91□□□□□ -1.62
COPS3-213ENST00000577210 EIF4G2P78344 907 aaKnown RBP eCLIP4.91□□□□□ -1.62
COPS3-213ENST00000577210 PTK2Q05397 1052 aa4.91□□□□□ -1.62
COPS3-213ENST00000577210 FBXO31Q5XUX0 539 aaPredicted RBP4.91□□□□□ -1.62
COPS3-213ENST00000577210 LRRN4Q8WUT4 740 aa4.91□□□□□ -1.62
COPS3-213ENST00000577210 GJD4Q96KN9 370 aaPredicted RBP4.91□□□□□ -1.62
COPS3-213ENST00000577210 AXIN1O15169 862 aa4.9□□□□□ -1.63
COPS3-213ENST00000577210 NR6A1Q15406 480 aa4.9□□□□□ -1.63
COPS3-213ENST00000577210 PTCRAQ6ISU1 281 aaPredicted RBP4.9□□□□□ -1.63
COPS3-213ENST00000577210 PDXDC2PQ6P474 469 aa4.9□□□□□ -1.63
COPS3-213ENST00000577210 TREML4Q6UXN2 200 aa4.9□□□□□ -1.63
COPS3-213ENST00000577210 CCDC125Q86Z20 511 aa4.9□□□□□ -1.63
COPS3-213ENST00000577210 CLUAP1Q96AJ1 413 aa4.9□□□□□ -1.63
COPS3-213ENST00000577210 TRIM34Q9BYJ4 488 aa4.9□□□□□ -1.63
COPS3-213ENST00000577210 GMPR2Q9P2T1 348 aaKnown RBP4.9□□□□□ -1.63
COPS3-213ENST00000577210 SERPINA10Q9UK55 444 aa4.9□□□□□ -1.63
COPS3-213ENST00000577210 ZBBXA8MT70 800 aa4.89□□□□□ -1.63
COPS3-213ENST00000577210 PER1O15534 1290 aaPredicted RBP4.89□□□□□ -1.63
COPS3-213ENST00000577210 RC3H1Q5TC82 1133 aaKnown RBP4.89□□□□□ -1.63
COPS3-213ENST00000577210 FNBP4Q8N3X1 1017 aaPredicted RBP4.89□□□□□ -1.63
COPS3-213ENST00000577210 SNIP1Q8TAD8 396 aaKnown RBP4.89□□□□□ -1.63
COPS3-213ENST00000577210 HMX1Q9NP08 348 aaPredicted RBP4.89□□□□□ -1.63
COPS3-213ENST00000577210 CDV3Q9UKY7 258 aaKnown RBP4.89□□□□□ -1.63
COPS3-213ENST00000577210 TBC1D2BQ9UPU7 963 aa4.89□□□□□ -1.63
COPS3-213ENST00000577210 SMCPP49901 116 aaPredicted RBP4.88□□□□□ -1.63
COPS3-213ENST00000577210 NR1H3Q13133 447 aa4.88□□□□□ -1.63
COPS3-213ENST00000577210 SEMA3FQ13275 785 aa4.88□□□□□ -1.63
COPS3-213ENST00000577210 CTC1Q2NKJ3 1217 aa4.88□□□□□ -1.63
COPS3-213ENST00000577210 LCE2AQ5TA79 106 aaPredicted RBP4.88□□□□□ -1.63
COPS3-213ENST00000577210 BPHLQ86WA6 291 aaPredicted RBP4.88□□□□□ -1.63
COPS3-213ENST00000577210 HPS1Q92902 700 aa4.88□□□□□ -1.63
COPS3-213ENST00000577210 CCDC97Q96F63 343 aaPredicted RBP4.88□□□□□ -1.63
COPS3-213ENST00000577210 UNC93B1Q9H1C4 597 aa4.88□□□□□ -1.63
COPS3-213ENST00000577210 STK17AQ9UEE5 414 aa4.88□□□□□ -1.63
COPS3-213ENST00000577210 WNT7BP56706 349 aa4.87□□□□□ -1.63
COPS3-213ENST00000577210 POM121Q96HA1 1249 aa4.87□□□□□ -1.63
COPS3-213ENST00000577210 CALR3Q96L12 384 aaKnown RBP4.87□□□□□ -1.63
COPS3-213ENST00000577210 AGERQ15109 404 aa4.86□□□□□ -1.63
COPS3-213ENST00000577210 LINC01559Q495D7 138 aa4.86□□□□□ -1.63
COPS3-213ENST00000577210 ZBTB33Q86T24 672 aa4.86□□□□□ -1.63
COPS3-213ENST00000577210 ARHGAP9Q9BRR9 750 aa4.86□□□□□ -1.63
COPS3-213ENST00000577210 ATP13A2Q9NQ11 1180 aa4.86□□□□□ -1.63
COPS3-213ENST00000577210 MAP10Q9P2G4 905 aa4.86□□□□□ -1.63
COPS3-213ENST00000577210 C11orf95C9JLR9 678 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms