RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 ZRANB1Q9UGI0 708 aa17.65■□□□□ 0.42
PRPF8-215ENST00000576958 COL14A1Q05707 1796 aaKnown RBP17.65■□□□□ 0.42
PRPF8-215ENST00000576958 A0A0G2JS52 829 aa17.64■□□□□ 0.41
PRPF8-215ENST00000576958 MYT1Q01538 1121 aa17.64■□□□□ 0.41
PRPF8-215ENST00000576958 CHRNA2Q15822 529 aa17.64■□□□□ 0.41
PRPF8-215ENST00000576958 KRT27Q7Z3Y8 459 aa17.64■□□□□ 0.41
PRPF8-215ENST00000576958 NGDNQ8NEJ9 315 aaKnown RBP17.64■□□□□ 0.41
PRPF8-215ENST00000576958 NUDT16Q96DE0 195 aaKnown RBP17.64■□□□□ 0.41
PRPF8-215ENST00000576958 GPRASP1Q5JY77 1395 aa17.64■□□□□ 0.41
PRPF8-215ENST00000576958 PHRF1Q9P1Y6 1649 aaKnown RBP17.63■□□□□ 0.41
PRPF8-215ENST00000576958 CDK19Q9BWU1 502 aa17.63■□□□□ 0.41
PRPF8-215ENST00000576958 TOPAZ1Q8N9V7 1692 aa17.63■□□□□ 0.41
PRPF8-215ENST00000576958 CCDC125Q86Z20 511 aa17.61■□□□□ 0.41
PRPF8-215ENST00000576958 ITSN1Q15811 1721 aa17.61■□□□□ 0.41
PRPF8-215ENST00000576958 KIAA0232Q92628 1395 aa17.6■□□□□ 0.41
PRPF8-215ENST00000576958 THSD7AQ9UPZ6 1657 aa17.6■□□□□ 0.41
PRPF8-215ENST00000576958 SPATA31A5Q5VU36 1347 aa17.59■□□□□ 0.41
PRPF8-215ENST00000576958 SPATA31A7Q8IWB4 1347 aa17.59■□□□□ 0.41
PRPF8-215ENST00000576958 ZC3H6P61129 1189 aaKnown RBP17.59■□□□□ 0.41
PRPF8-215ENST00000576958 ACEP12821 1306 aa17.58■□□□□ 0.4
PRPF8-215ENST00000576958 PSDA5PKW4 1024 aaPredicted RBP17.58■□□□□ 0.4
PRPF8-215ENST00000576958 PRDM11Q9NQV5 511 aa17.58■□□□□ 0.4
PRPF8-215ENST00000576958 EIF3AQ14152 1382 aaKnown RBP17.57■□□□□ 0.4
PRPF8-215ENST00000576958 STRN4Q9NRL3 753 aa17.57■□□□□ 0.4
PRPF8-215ENST00000576958 NRKQ7Z2Y5 1582 aa17.56■□□□□ 0.4
PRPF8-215ENST00000576958 HRCP23327 699 aa17.55■□□□□ 0.4
PRPF8-215ENST00000576958 EN1Q05925 392 aaPredicted RBP17.55■□□□□ 0.4
PRPF8-215ENST00000576958 TNS1Q9HBL0 1735 aaKnown RBP17.55■□□□□ 0.4
PRPF8-215ENST00000576958 KIAA1210Q9ULL0 1709 aa17.55■□□□□ 0.4
PRPF8-215ENST00000576958 POLR3AO14802 1390 aaPredicted RBP17.54■□□□□ 0.4
PRPF8-215ENST00000576958 NBPF8Q3BBV2 869 aa17.54■□□□□ 0.4
PRPF8-215ENST00000576958 CABP2Q9NPB3 220 aa17.54■□□□□ 0.4
PRPF8-215ENST00000576958 USP35Q9P2H5 1018 aa17.54■□□□□ 0.4
PRPF8-215ENST00000576958 SPATA31A1Q5TZJ5 1347 aa17.53■□□□□ 0.4
PRPF8-215ENST00000576958 CAMTA1Q9Y6Y1 1673 aa17.53■□□□□ 0.4
PRPF8-215ENST00000576958 SF3B2Q13435 895 aaKnown RBP17.53■□□□□ 0.4
PRPF8-215ENST00000576958 QRICH2Q9H0J4 1663 aa17.52■□□□□ 0.39
PRPF8-215ENST00000576958 SIN3AQ96ST3 1273 aa17.51■□□□□ 0.39
PRPF8-215ENST00000576958 RGPD1P0DJD0 1748 aa17.5■□□□□ 0.39
PRPF8-215ENST00000576958 PPIP5K1Q6PFW1 1433 aa17.5■□□□□ 0.39
PRPF8-215ENST00000576958 PLEKHG3A1L390 1219 aa17.5■□□□□ 0.39
PRPF8-215ENST00000576958 LARP1Q6PKG0 1096 aaKnown RBP17.5■□□□□ 0.39
PRPF8-215ENST00000576958 LMO7Q8WWI1 1683 aa17.5■□□□□ 0.39
PRPF8-215ENST00000576958 STAC3Q96MF2 364 aa17.49■□□□□ 0.39
PRPF8-215ENST00000576958 CCDC61Q9Y6R9 512 aa17.49■□□□□ 0.39
PRPF8-215ENST00000576958 SSH2Q76I76 1423 aa17.48■□□□□ 0.39
PRPF8-215ENST00000576958 SRPK2P78362 688 aaKnown RBP17.48■□□□□ 0.39
PRPF8-215ENST00000576958 EZH2Q15910 746 aaKnown RBP17.48■□□□□ 0.39
PRPF8-215ENST00000576958 ABTB2Q8N961 1025 aa17.48■□□□□ 0.39
PRPF8-215ENST00000576958 USP19O94966 1318 aa17.47■□□□□ 0.39
PRPF8-215ENST00000576958 TRIM37O94972 964 aa17.47■□□□□ 0.39
PRPF8-215ENST00000576958 BAG6P46379 1132 aa17.47■□□□□ 0.39
PRPF8-215ENST00000576958 L3MBTL2Q969R5 705 aa17.47■□□□□ 0.39
PRPF8-215ENST00000576958 CENPJQ9HC77 1338 aaPredicted RBP17.47■□□□□ 0.39
PRPF8-215ENST00000576958 ZBTB7CA1YPR0 619 aa17.46■□□□□ 0.39
PRPF8-215ENST00000576958 LRP5O75197 1615 aa17.46■□□□□ 0.39
PRPF8-215ENST00000576958 R3HDM1Q15032 1099 aaKnown RBP17.45■□□□□ 0.38
PRPF8-215ENST00000576958 CABP1Q9NZU7 370 aa17.45■□□□□ 0.38
PRPF8-215ENST00000576958 TRPM1Q7Z4N2 1603 aa17.43■□□□□ 0.38
PRPF8-215ENST00000576958 PIK3C2AO00443 1686 aa17.43■□□□□ 0.38
PRPF8-215ENST00000576958 GCP02774 474 aa17.43■□□□□ 0.38
PRPF8-215ENST00000576958 EVA1CP58658 441 aa17.42■□□□□ 0.38
PRPF8-215ENST00000576958 CAMKK2Q96RR4 588 aa17.42■□□□□ 0.38
PRPF8-215ENST00000576958 COL5A2P05997 1499 aaPredicted RBP17.42■□□□□ 0.38
PRPF8-215ENST00000576958 CPDO75976 1380 aa17.41■□□□□ 0.38
PRPF8-215ENST00000576958 DISP2A7MBM2 1401 aa17.41■□□□□ 0.38
PRPF8-215ENST00000576958 USP6P35125 1406 aa17.41■□□□□ 0.38
PRPF8-215ENST00000576958 NEUROD1Q13562 356 aa17.41■□□□□ 0.38
PRPF8-215ENST00000576958 PTF1AQ7RTS3 328 aa17.4■□□□□ 0.38
PRPF8-215ENST00000576958 COL18A1P39060 1754 aa17.39■□□□□ 0.37
PRPF8-215ENST00000576958 SLIT3O75094 1523 aa17.39■□□□□ 0.37
PRPF8-215ENST00000576958 APBA3O96018 575 aa17.39■□□□□ 0.37
PRPF8-215ENST00000576958 NUP188Q5SRE5 1749 aa17.38■□□□□ 0.37
PRPF8-215ENST00000576958 SOX12O15370 315 aa17.38■□□□□ 0.37
PRPF8-215ENST00000576958 BARGINQ6ZT62 677 aa17.38■□□□□ 0.37
PRPF8-215ENST00000576958 TCP11L2Q8N4U5 519 aa17.38■□□□□ 0.37
PRPF8-215ENST00000576958 AXIN2Q9Y2T1 843 aa17.38■□□□□ 0.37
PRPF8-215ENST00000576958 RREB1Q92766 1687 aa17.38■□□□□ 0.37
PRPF8-215ENST00000576958 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
PRPF8-215ENST00000576958 LRRC37A3O60309 1634 aa17.37■□□□□ 0.37
PRPF8-215ENST00000576958 NLRP6P59044 892 aa17.37■□□□□ 0.37
PRPF8-215ENST00000576958 FAM196AQ6ZSG2 479 aa17.37■□□□□ 0.37
PRPF8-215ENST00000576958 NLRP13Q86W25 1043 aa17.37■□□□□ 0.37
PRPF8-215ENST00000576958 PARP4Q9UKK3 1724 aaKnown RBP17.36■□□□□ 0.37
PRPF8-215ENST00000576958 PEAK1Q9H792 1746 aa17.35■□□□□ 0.37
PRPF8-215ENST00000576958 PDE3BQ13370 1112 aa17.35■□□□□ 0.37
PRPF8-215ENST00000576958 AKAP12Q02952 1782 aa17.35■□□□□ 0.37
PRPF8-215ENST00000576958 WNK3Q9BYP7 1800 aa17.33■□□□□ 0.37
PRPF8-215ENST00000576958 CRB1P82279 1406 aa17.33■□□□□ 0.36
PRPF8-215ENST00000576958 ROCK2O75116 1388 aaKnown RBP17.33■□□□□ 0.36
PRPF8-215ENST00000576958 TTC21BQ7Z4L5 1316 aa17.32■□□□□ 0.36
PRPF8-215ENST00000576958 AATKQ6ZMQ8 1374 aa17.31■□□□□ 0.36
PRPF8-215ENST00000576958 SBF2Q86WG5 1849 aa17.31■□□□□ 0.36
PRPF8-215ENST00000576958 EVC2Q86UK5 1308 aa17.31■□□□□ 0.36
PRPF8-215ENST00000576958 CPSF1Q10570 1443 aaKnown RBP17.3■□□□□ 0.36
PRPF8-215ENST00000576958 NFAT5O94916 1531 aa17.3■□□□□ 0.36
PRPF8-215ENST00000576958 TOM1L2Q6ZVM7 507 aa17.29■□□□□ 0.36
PRPF8-215ENST00000576958 CD163L1Q9NR16 1453 aa17.29■□□□□ 0.36
PRPF8-215ENST00000576958 MARCH10Q8NA82 808 aaPredicted RBP17.28■□□□□ 0.36
PRPF8-215ENST00000576958 MON2Q7Z3U7 1717 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms