RNA–Protein interactions for RNA: ENST00000576523.1

NCBP3-206, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 249 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-206ENST00000576523 DISP3Q9P2K9 1392 aa12.34□□□□□ -0.43
NCBP3-206ENST00000576523 PIP4K2BP78356 416 aa12.34□□□□□ -0.43
NCBP3-206ENST00000576523 BRINP3Q76B58 766 aa12.34□□□□□ -0.43
NCBP3-206ENST00000576523 ORAI2Q96SN7 254 aa12.34□□□□□ -0.43
NCBP3-206ENST00000576523 PODXL2Q9NZ53 605 aa12.34□□□□□ -0.43
NCBP3-206ENST00000576523 SHPRHQ149N8 1683 aa12.34□□□□□ -0.43
NCBP3-206ENST00000576523 HSPA5P11021 654 aaKnown RBP12.33□□□□□ -0.44
NCBP3-206ENST00000576523 CDK19Q9BWU1 502 aa12.33□□□□□ -0.44
NCBP3-206ENST00000576523 PXDNQ92626 1479 aa12.33□□□□□ -0.44
NCBP3-206ENST00000576523 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
NCBP3-206ENST00000576523 DDX17Q92841 729 aaKnown RBP12.31□□□□□ -0.44
NCBP3-206ENST00000576523 CABP2Q9NPB3 220 aa12.31□□□□□ -0.44
NCBP3-206ENST00000576523 CD163L1Q9NR16 1453 aa12.31□□□□□ -0.44
NCBP3-206ENST00000576523 COL22A1Q8NFW1 1626 aaPredicted RBP12.3□□□□□ -0.44
NCBP3-206ENST00000576523 NUDT16Q96DE0 195 aaKnown RBP12.3□□□□□ -0.44
NCBP3-206ENST00000576523 KIF20BQ96Q89 1820 aa12.3□□□□□ -0.44
NCBP3-206ENST00000576523 ILDR1Q86SU0 546 aaPredicted RBP12.29□□□□□ -0.44
NCBP3-206ENST00000576523 PIK3C2AO00443 1686 aa12.29□□□□□ -0.44
NCBP3-206ENST00000576523 USP54Q70EL1 1684 aa12.29□□□□□ -0.44
NCBP3-206ENST00000576523 PPIP5K1Q6PFW1 1433 aa12.28□□□□□ -0.44
NCBP3-206ENST00000576523 C11orf95C9JLR9 678 aaPredicted RBP12.28□□□□□ -0.44
NCBP3-206ENST00000576523 HSPA1LP34931 641 aa12.28□□□□□ -0.44
NCBP3-206ENST00000576523 EIF4G2P78344 907 aaKnown RBP eCLIP12.28□□□□□ -0.44
NCBP3-206ENST00000576523 ESCO1Q5FWF5 840 aa12.28□□□□□ -0.44
NCBP3-206ENST00000576523 EVC2Q86UK5 1308 aa12.28□□□□□ -0.44
NCBP3-206ENST00000576523 PHRF1Q9P1Y6 1649 aaKnown RBP12.27□□□□□ -0.44
NCBP3-206ENST00000576523 POLR3AO14802 1390 aaPredicted RBP12.27□□□□□ -0.45
NCBP3-206ENST00000576523 SRPK2P78362 688 aaKnown RBP12.26□□□□□ -0.45
NCBP3-206ENST00000576523 PMFBP1Q8TBY8 1022 aa12.26□□□□□ -0.45
NCBP3-206ENST00000576523 PHF8Q9UPP1 1060 aa12.26□□□□□ -0.45
NCBP3-206ENST00000576523 ANKRD26Q9UPS8 1709 aa12.25□□□□□ -0.45
NCBP3-206ENST00000576523 SOS2Q07890 1332 aaPredicted RBP12.25□□□□□ -0.45
NCBP3-206ENST00000576523 CPSF1Q10570 1443 aaKnown RBP12.25□□□□□ -0.45
NCBP3-206ENST00000576523 PLEKHG3A1L390 1219 aa12.24□□□□□ -0.45
NCBP3-206ENST00000576523 FOXO3O43524 673 aa12.24□□□□□ -0.45
NCBP3-206ENST00000576523 XPCQ01831 940 aaPredicted RBP12.24□□□□□ -0.45
NCBP3-206ENST00000576523 ATAD2Q6PL18 1390 aa12.24□□□□□ -0.45
NCBP3-206ENST00000576523 SSH2Q76I76 1423 aa12.24□□□□□ -0.45
NCBP3-206ENST00000576523 RGPD5Q99666 1765 aa12.24□□□□□ -0.45
NCBP3-206ENST00000576523 CCDC61Q9Y6R9 512 aa12.24□□□□□ -0.45
NCBP3-206ENST00000576523 ACEP12821 1306 aa12.23□□□□□ -0.45
NCBP3-206ENST00000576523 PUS7Q96PZ0 661 aaKnown RBP12.23□□□□□ -0.45
NCBP3-206ENST00000576523 CABP1Q9NZU7 370 aa12.23□□□□□ -0.45
NCBP3-206ENST00000576523 MED1Q15648 1581 aaPredicted RBP12.22□□□□□ -0.45
NCBP3-206ENST00000576523 USP6P35125 1406 aa12.22□□□□□ -0.45
NCBP3-206ENST00000576523 ZEB1P37275 1124 aaPredicted RBP12.22□□□□□ -0.45
NCBP3-206ENST00000576523 TMF1P82094 1093 aa12.22□□□□□ -0.45
NCBP3-206ENST00000576523 U3KPZ7 1027 aaPredicted RBP12.22□□□□□ -0.45
NCBP3-206ENST00000576523 A0A1W2PP64 1363 aa12.21□□□□□ -0.45
NCBP3-206ENST00000576523 LTN1O94822 1766 aa12.21□□□□□ -0.45
NCBP3-206ENST00000576523 NPHP3Q7Z494 1330 aa12.21□□□□□ -0.45
NCBP3-206ENST00000576523 SLC12A5Q9H2X9 1139 aa12.21□□□□□ -0.45
NCBP3-206ENST00000576523 MAP2P11137 1827 aaKnown RBP12.21□□□□□ -0.46
NCBP3-206ENST00000576523 TNS3Q68CZ2 1445 aa12.2□□□□□ -0.46
NCBP3-206ENST00000576523 PNPLA6Q8IY17 1366 aa12.2□□□□□ -0.46
NCBP3-206ENST00000576523 KIF7Q2M1P5 1343 aa12.2□□□□□ -0.46
NCBP3-206ENST00000576523 LRP6O75581 1613 aa12.2□□□□□ -0.46
NCBP3-206ENST00000576523 KRT28Q7Z3Y7 464 aa12.2□□□□□ -0.46
NCBP3-206ENST00000576523 HS6ST3Q8IZP7 471 aa12.2□□□□□ -0.46
NCBP3-206ENST00000576523 PLCH1Q4KWH8 1693 aa12.19□□□□□ -0.46
NCBP3-206ENST00000576523 SBNO1A3KN83 1393 aa12.18□□□□□ -0.46
NCBP3-206ENST00000576523 CCDC7Q96M83 1385 aa12.18□□□□□ -0.46
NCBP3-206ENST00000576523 SPATA31A3Q5VYP0 1347 aa12.18□□□□□ -0.46
NCBP3-206ENST00000576523 WASHC2AQ641Q2 1341 aa12.18□□□□□ -0.46
NCBP3-206ENST00000576523 KLHL34Q8N239 644 aa12.18□□□□□ -0.46
NCBP3-206ENST00000576523 NGDNQ8NEJ9 315 aaKnown RBP12.18□□□□□ -0.46
NCBP3-206ENST00000576523 COL18A1P39060 1754 aa12.18□□□□□ -0.46
NCBP3-206ENST00000576523 NINLQ9Y2I6 1382 aa12.18□□□□□ -0.46
NCBP3-206ENST00000576523 ANKRD36BQ8N2N9 1353 aa12.17□□□□□ -0.46
NCBP3-206ENST00000576523 JCADQ9P266 1359 aa12.17□□□□□ -0.46
NCBP3-206ENST00000576523 TMC1Q8TDI8 760 aa12.16□□□□□ -0.46
NCBP3-206ENST00000576523 KTN1Q86UP2 1357 aaKnown RBP12.16□□□□□ -0.46
NCBP3-206ENST00000576523 SLIT3O75094 1523 aa12.16□□□□□ -0.46
NCBP3-206ENST00000576523 NRAPQ86VF7 1730 aa12.15□□□□□ -0.46
NCBP3-206ENST00000576523 EDC4Q6P2E9 1401 aaKnown RBP12.15□□□□□ -0.46
NCBP3-206ENST00000576523 PSME1Q06323 249 aa12.15□□□□□ -0.46
NCBP3-206ENST00000576523 CDCA8Q53HL2 280 aa12.14□□□□□ -0.47
NCBP3-206ENST00000576523 LRRC59Q96AG4 307 aaKnown RBP12.14□□□□□ -0.47
NCBP3-206ENST00000576523 CARD14Q9BXL6 1004 aa12.14□□□□□ -0.47
NCBP3-206ENST00000576523 RGPD2P0DJD1 1756 aa12.14□□□□□ -0.47
NCBP3-206ENST00000576523 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.14□□□□□ -0.47
NCBP3-206ENST00000576523 NWD2Q9ULI1 1742 aa12.14□□□□□ -0.47
NCBP3-206ENST00000576523 TTC21BQ7Z4L5 1316 aa12.13□□□□□ -0.47
NCBP3-206ENST00000576523 LMO7Q8WWI1 1683 aa12.13□□□□□ -0.47
NCBP3-206ENST00000576523 NFAT5O94916 1531 aa12.13□□□□□ -0.47
NCBP3-206ENST00000576523 POLR3GLQ9BT43 218 aa12.13□□□□□ -0.47
NCBP3-206ENST00000576523 ZRANB1Q9UGI0 708 aa12.13□□□□□ -0.47
NCBP3-206ENST00000576523 BRD4O60885 1362 aaPredicted RBP12.13□□□□□ -0.47
NCBP3-206ENST00000576523 OVOS2A0A0J9YW53 1432 aa12.12□□□□□ -0.47
NCBP3-206ENST00000576523 OVOS2Q6IE36 1432 aa12.12□□□□□ -0.47
NCBP3-206ENST00000576523 COL14A1Q05707 1796 aaKnown RBP12.12□□□□□ -0.47
NCBP3-206ENST00000576523 NSD3Q9BZ95 1437 aa12.11□□□□□ -0.47
NCBP3-206ENST00000576523 PEAK1Q9H792 1746 aa12.11□□□□□ -0.47
NCBP3-206ENST00000576523 ARHGEF10O15013 1369 aa12.11□□□□□ -0.47
NCBP3-206ENST00000576523 NUTM2GQ5VZR2 741 aa12.11□□□□□ -0.47
NCBP3-206ENST00000576523 CABLES1Q8TDN4 633 aa12.11□□□□□ -0.47
NCBP3-206ENST00000576523 ZNF692Q9BU19 519 aaPredicted RBP12.11□□□□□ -0.47
NCBP3-206ENST00000576523 USP19O94966 1318 aa12.11□□□□□ -0.47
NCBP3-206ENST00000576523 USP31Q70CQ4 1352 aa12.1□□□□□ -0.47
NCBP3-206ENST00000576523 PAK3O75914 559 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms