RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 PMFBP1Q8TBY8 1022 aa20.48■□□□□ 0.87
CDC27-217ENST00000575483 DCAF11Q8TEB1 546 aa20.48■□□□□ 0.87
CDC27-217ENST00000575483 HIRIP3Q9BW71 556 aaPredicted RBP20.47■□□□□ 0.87
CDC27-217ENST00000575483 ATXN8OSP0DMR3 200 aa20.46■□□□□ 0.87
CDC27-217ENST00000575483 STAC3Q96MF2 364 aa20.46■□□□□ 0.87
CDC27-217ENST00000575483 KDM2AQ9Y2K7 1162 aa20.46■□□□□ 0.87
CDC27-217ENST00000575483 ITSN1Q15811 1721 aa20.46■□□□□ 0.87
CDC27-217ENST00000575483 MINK1Q8N4C8 1332 aaPredicted RBP20.46■□□□□ 0.87
CDC27-217ENST00000575483 ATP7BP35670 1465 aa20.45■□□□□ 0.86
CDC27-217ENST00000575483 KIAA1210Q9ULL0 1709 aa20.45■□□□□ 0.86
CDC27-217ENST00000575483 VPS72Q15906 364 aa20.45■□□□□ 0.86
CDC27-217ENST00000575483 EIF3AQ14152 1382 aaKnown RBP20.45■□□□□ 0.86
CDC27-217ENST00000575483 WASLO00401 505 aaPredicted RBP20.44■□□□□ 0.86
CDC27-217ENST00000575483 ONECUT3O60422 494 aaPredicted RBP20.44■□□□□ 0.86
CDC27-217ENST00000575483 TOPAZ1Q8N9V7 1692 aa20.44■□□□□ 0.86
CDC27-217ENST00000575483 COL14A1Q05707 1796 aaKnown RBP20.44■□□□□ 0.86
CDC27-217ENST00000575483 FAM83GA6ND36 823 aa20.43■□□□□ 0.86
CDC27-217ENST00000575483 CCDC125Q86Z20 511 aa20.43■□□□□ 0.86
CDC27-217ENST00000575483 SPINK5Q9NQ38 1064 aaPredicted RBP20.43■□□□□ 0.86
CDC27-217ENST00000575483 BLMP54132 1417 aaPredicted RBP20.41■□□□□ 0.86
CDC27-217ENST00000575483 HAP1P54257 671 aaPredicted RBP20.4■□□□□ 0.86
CDC27-217ENST00000575483 LMOD2Q6P5Q4 547 aa20.4■□□□□ 0.86
CDC27-217ENST00000575483 GPRASP1Q5JY77 1395 aa20.39■□□□□ 0.85
CDC27-217ENST00000575483 CAPN15O75808 1086 aa20.39■□□□□ 0.85
CDC27-217ENST00000575483 PLEKHG5O94827 1062 aa20.39■□□□□ 0.85
CDC27-217ENST00000575483 SEPT12Q8IYM1 358 aa20.39■□□□□ 0.85
CDC27-217ENST00000575483 PHRF1Q9P1Y6 1649 aaKnown RBP20.38■□□□□ 0.85
CDC27-217ENST00000575483 THSD7AQ9UPZ6 1657 aa20.35■□□□□ 0.85
CDC27-217ENST00000575483 POLR3AO14802 1390 aaPredicted RBP20.34■□□□□ 0.85
CDC27-217ENST00000575483 NUDT16Q96DE0 195 aaKnown RBP20.33■□□□□ 0.85
CDC27-217ENST00000575483 BTG4Q9NY30 223 aa20.33■□□□□ 0.85
CDC27-217ENST00000575483 ZRANB1Q9UGI0 708 aa20.33■□□□□ 0.85
CDC27-217ENST00000575483 NGDNQ8NEJ9 315 aaKnown RBP20.32■□□□□ 0.84
CDC27-217ENST00000575483 KRT27Q7Z3Y8 459 aa20.31■□□□□ 0.84
CDC27-217ENST00000575483 DEFB132Q7Z7B7 95 aa20.31■□□□□ 0.84
CDC27-217ENST00000575483 ZNF219Q9P2Y4 722 aaPredicted RBP20.31■□□□□ 0.84
CDC27-217ENST00000575483 CDK19Q9BWU1 502 aa20.3■□□□□ 0.84
CDC27-217ENST00000575483 CCDC9Q9Y3X0 531 aaKnown RBP20.3■□□□□ 0.84
CDC27-217ENST00000575483 NRKQ7Z2Y5 1582 aa20.29■□□□□ 0.84
CDC27-217ENST00000575483 SPATA31A5Q5VU36 1347 aa20.29■□□□□ 0.84
CDC27-217ENST00000575483 SPATA31A7Q8IWB4 1347 aa20.29■□□□□ 0.84
CDC27-217ENST00000575483 NBPF1Q3BBV0 1214 aa20.29■□□□□ 0.84
CDC27-217ENST00000575483 ATF5Q9Y2D1 282 aaPredicted RBP20.29■□□□□ 0.84
CDC27-217ENST00000575483 FAM98CQ17RN3 349 aaKnown RBP20.28■□□□□ 0.84
CDC27-217ENST00000575483 TNS1Q9HBL0 1735 aaKnown RBP20.27■□□□□ 0.84
CDC27-217ENST00000575483 QRICH2Q9H0J4 1663 aa20.27■□□□□ 0.84
CDC27-217ENST00000575483 KIAA0232Q92628 1395 aa20.27■□□□□ 0.84
CDC27-217ENST00000575483 PLEKHG3A1L390 1219 aa20.27■□□□□ 0.84
CDC27-217ENST00000575483 PAK3O75914 559 aaPredicted RBP20.27■□□□□ 0.84
CDC27-217ENST00000575483 RGPD1P0DJD0 1748 aa20.27■□□□□ 0.83
CDC27-217ENST00000575483 LMO7Q8WWI1 1683 aa20.26■□□□□ 0.83
CDC27-217ENST00000575483 CCDC61Q9Y6R9 512 aa20.26■□□□□ 0.83
CDC27-217ENST00000575483 ACEP12821 1306 aa20.26■□□□□ 0.83
CDC27-217ENST00000575483 PRDM11Q9NQV5 511 aa20.25■□□□□ 0.83
CDC27-217ENST00000575483 NBPF8Q3BBV2 869 aa20.24■□□□□ 0.83
CDC27-217ENST00000575483 SPATA31A1Q5TZJ5 1347 aa20.23■□□□□ 0.83
CDC27-217ENST00000575483 LRP5O75197 1615 aa20.22■□□□□ 0.83
CDC27-217ENST00000575483 CAMTA1Q9Y6Y1 1673 aa20.22■□□□□ 0.83
CDC27-217ENST00000575483 USP19O94966 1318 aa20.22■□□□□ 0.83
CDC27-217ENST00000575483 TRPM1Q7Z4N2 1603 aa20.21■□□□□ 0.83
CDC27-217ENST00000575483 CHRNA2Q15822 529 aa20.21■□□□□ 0.83
CDC27-217ENST00000575483 CPDO75976 1380 aa20.21■□□□□ 0.83
CDC27-217ENST00000575483 DISP2A7MBM2 1401 aa20.2■□□□□ 0.82
CDC27-217ENST00000575483 PPIP5K1Q6PFW1 1433 aa20.19■□□□□ 0.82
CDC27-217ENST00000575483 A0A0G2JS52 829 aa20.19■□□□□ 0.82
CDC27-217ENST00000575483 MYT1Q01538 1121 aa20.19■□□□□ 0.82
CDC27-217ENST00000575483 SF3B2Q13435 895 aaKnown RBP20.19■□□□□ 0.82
CDC27-217ENST00000575483 NUTM2GQ5VZR2 741 aa20.19■□□□□ 0.82
CDC27-217ENST00000575483 CENPJQ9HC77 1338 aaPredicted RBP20.19■□□□□ 0.82
CDC27-217ENST00000575483 SSH2Q76I76 1423 aa20.19■□□□□ 0.82
CDC27-217ENST00000575483 ZC3H6P61129 1189 aaKnown RBP20.18■□□□□ 0.82
CDC27-217ENST00000575483 FAM182BQ5T319 152 aa20.18■□□□□ 0.82
CDC27-217ENST00000575483 BAG6P46379 1132 aa20.15■□□□□ 0.82
CDC27-217ENST00000575483 L3MBTL2Q969R5 705 aa20.15■□□□□ 0.82
CDC27-217ENST00000575483 CABP2Q9NPB3 220 aa20.15■□□□□ 0.82
CDC27-217ENST00000575483 SLIT3O75094 1523 aa20.15■□□□□ 0.82
CDC27-217ENST00000575483 PIK3C2AO00443 1686 aa20.15■□□□□ 0.82
CDC27-217ENST00000575483 USP6P35125 1406 aa20.14■□□□□ 0.81
CDC27-217ENST00000575483 BRD4O60885 1362 aaPredicted RBP20.14■□□□□ 0.81
CDC27-217ENST00000575483 ABTB2Q8N961 1025 aa20.14■□□□□ 0.81
CDC27-217ENST00000575483 PARP4Q9UKK3 1724 aaKnown RBP20.13■□□□□ 0.81
CDC27-217ENST00000575483 SRPK2P78362 688 aaKnown RBP20.13■□□□□ 0.81
CDC27-217ENST00000575483 STRN4Q9NRL3 753 aa20.13■□□□□ 0.81
CDC27-217ENST00000575483 COL18A1P39060 1754 aa20.13■□□□□ 0.81
CDC27-217ENST00000575483 COL5A2P05997 1499 aaPredicted RBP20.12■□□□□ 0.81
CDC27-217ENST00000575483 EN1Q05925 392 aaPredicted RBP20.12■□□□□ 0.81
CDC27-217ENST00000575483 BARGINQ6ZT62 677 aa20.12■□□□□ 0.81
CDC27-217ENST00000575483 AKAP12Q02952 1782 aa20.12■□□□□ 0.81
CDC27-217ENST00000575483 RREB1Q92766 1687 aa20.11■□□□□ 0.81
CDC27-217ENST00000575483 GCP02774 474 aa20.1■□□□□ 0.81
CDC27-217ENST00000575483 LARP1Q6PKG0 1096 aaKnown RBP20.1■□□□□ 0.81
CDC27-217ENST00000575483 NLRP13Q86W25 1043 aa20.09■□□□□ 0.81
CDC27-217ENST00000575483 SIN3AQ96ST3 1273 aa20.09■□□□□ 0.81
CDC27-217ENST00000575483 PEAK1Q9H792 1746 aa20.08■□□□□ 0.81
CDC27-217ENST00000575483 PSDA5PKW4 1024 aaPredicted RBP20.08■□□□□ 0.81
CDC27-217ENST00000575483 CABP1Q9NZU7 370 aa20.08■□□□□ 0.81
CDC27-217ENST00000575483 WNK3Q9BYP7 1800 aa20.08■□□□□ 0.8
CDC27-217ENST00000575483 DSG3P32926 999 aa20.07■□□□□ 0.8
CDC27-217ENST00000575483 FAM196AQ6ZSG2 479 aa20.07■□□□□ 0.8
CDC27-217ENST00000575483 USP35Q9P2H5 1018 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 208.5 ms