RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 PLEKHF1Q96S99 279 aa30.82■■■□□ 2.52
NPLOC4-217ENST00000574897 ZRANB1Q9UGI0 708 aa30.81■■■□□ 2.52
NPLOC4-217ENST00000574897 CCDC27Q2M243 656 aa30.8■■■□□ 2.52
NPLOC4-217ENST00000574897 WDR63Q8IWG1 891 aa30.8■■■□□ 2.52
NPLOC4-217ENST00000574897 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.8■■■□□ 2.52
NPLOC4-217ENST00000574897 PPM1GO15355 546 aaPredicted RBP30.8■■■□□ 2.52
NPLOC4-217ENST00000574897 NME9Q86XW9 330 aa30.8■■■□□ 2.52
NPLOC4-217ENST00000574897 MON2Q7Z3U7 1717 aa30.79■■■□□ 2.52
NPLOC4-217ENST00000574897 SLC26A8Q96RN1 970 aa30.79■■■□□ 2.52
NPLOC4-217ENST00000574897 PNPLA6Q8IY17 1366 aa30.78■■■□□ 2.52
NPLOC4-217ENST00000574897 PRR36Q9H6K5 1346 aa30.78■■■□□ 2.52
NPLOC4-217ENST00000574897 DIAPH1O60610 1272 aaKnown RBP30.78■■■□□ 2.52
NPLOC4-217ENST00000574897 CDC42BPGQ6DT37 1551 aa30.78■■■□□ 2.52
NPLOC4-217ENST00000574897 AKAP12Q02952 1782 aa30.78■■■□□ 2.52
NPLOC4-217ENST00000574897 ITSN1Q15811 1721 aa30.78■■■□□ 2.52
NPLOC4-217ENST00000574897 SIRT1Q96EB6 747 aa30.77■■■□□ 2.52
NPLOC4-217ENST00000574897 POLKQ9UBT6 870 aa30.77■■■□□ 2.52
NPLOC4-217ENST00000574897 EDC4Q6P2E9 1401 aaKnown RBP30.77■■■□□ 2.52
NPLOC4-217ENST00000574897 PLEKHG1Q9ULL1 1385 aa30.77■■■□□ 2.52
NPLOC4-217ENST00000574897 TRHP20396 242 aaPredicted RBP30.76■■■□□ 2.51
NPLOC4-217ENST00000574897 CCDC61Q9Y6R9 512 aa30.75■■■□□ 2.51
NPLOC4-217ENST00000574897 TMPOP42166 694 aaKnown RBP30.74■■■□□ 2.51
NPLOC4-217ENST00000574897 KDM2BQ8NHM5 1336 aa30.74■■■□□ 2.51
NPLOC4-217ENST00000574897 NUTM2FA1L443 756 aa30.73■■■□□ 2.51
NPLOC4-217ENST00000574897 PTPRUQ92729 1446 aa30.73■■■□□ 2.51
NPLOC4-217ENST00000574897 EMILIN1Q9Y6C2 1016 aa30.72■■■□□ 2.51
NPLOC4-217ENST00000574897 RARSP54136 660 aaKnown RBP30.71■■■□□ 2.51
NPLOC4-217ENST00000574897 BCL2L13Q9BXK5 485 aa30.71■■■□□ 2.51
NPLOC4-217ENST00000574897 TRIM35Q9UPQ4 493 aa30.71■■■□□ 2.51
NPLOC4-217ENST00000574897 MAPK8IP3Q9UPT6 1336 aa30.71■■■□□ 2.51
NPLOC4-217ENST00000574897 LRRC7Q96NW7 1537 aa30.7■■■□□ 2.51
NPLOC4-217ENST00000574897 TCERG1O14776 1098 aaKnown RBP30.7■■■□□ 2.51
NPLOC4-217ENST00000574897 FRAT1Q92837 279 aaPredicted RBP30.7■■■□□ 2.51
NPLOC4-217ENST00000574897 TSR2Q969E8 191 aaKnown RBP30.7■■■□□ 2.5
NPLOC4-217ENST00000574897 PANK1Q8TE04 598 aa30.69■■■□□ 2.5
NPLOC4-217ENST00000574897 CANXP27824 592 aaKnown RBP30.68■■■□□ 2.5
NPLOC4-217ENST00000574897 TNNQ9UQP3 1299 aa30.68■■■□□ 2.5
NPLOC4-217ENST00000574897 NCBP3Q53F19 620 aaKnown RBP30.67■■■□□ 2.5
NPLOC4-217ENST00000574897 EID1Q9Y6B2 187 aa30.67■■■□□ 2.5
NPLOC4-217ENST00000574897 SLIT1O75093 1534 aa30.66■■■□□ 2.5
NPLOC4-217ENST00000574897 ANP32EQ9BTT0 268 aa30.66■■■□□ 2.5
NPLOC4-217ENST00000574897 MYH16Q9H6N6 1097 aa30.66■■■□□ 2.5
NPLOC4-217ENST00000574897 ARHGAP23Q9P227 1491 aa30.66■■■□□ 2.5
NPLOC4-217ENST00000574897 COG6Q9Y2V7 657 aa30.65■■■□□ 2.5
NPLOC4-217ENST00000574897 TOPAZ1Q8N9V7 1692 aa30.65■■■□□ 2.5
NPLOC4-217ENST00000574897 RIPK4P57078 832 aa30.64■■■□□ 2.5
NPLOC4-217ENST00000574897 RRS1Q15050 365 aaKnown RBP30.63■■■□□ 2.49
NPLOC4-217ENST00000574897 HMOX1P09601 288 aa30.63■■■□□ 2.49
NPLOC4-217ENST00000574897 PDE3AQ14432 1141 aa30.63■■■□□ 2.49
NPLOC4-217ENST00000574897 CENPQQ7L2Z9 268 aaPredicted RBP30.63■■■□□ 2.49
NPLOC4-217ENST00000574897 PRKAR2BP31323 418 aa30.62■■■□□ 2.49
NPLOC4-217ENST00000574897 COG3Q96JB2 828 aa30.62■■■□□ 2.49
NPLOC4-217ENST00000574897 RSPH6AQ9H0K4 717 aa30.62■■■□□ 2.49
NPLOC4-217ENST00000574897 PDE4AP27815 886 aa30.61■■■□□ 2.49
NPLOC4-217ENST00000574897 AMOTL2Q9Y2J4 779 aa30.61■■■□□ 2.49
NPLOC4-217ENST00000574897 NRKQ7Z2Y5 1582 aa30.59■■■□□ 2.49
NPLOC4-217ENST00000574897 RGPD8O14715 1765 aaPredicted RBP30.59■■■□□ 2.49
NPLOC4-217ENST00000574897 FCHSD2O94868 740 aa30.59■■■□□ 2.49
NPLOC4-217ENST00000574897 RLBP1P12271 317 aa30.58■■■□□ 2.49
NPLOC4-217ENST00000574897 ACEP12821 1306 aa30.58■■■□□ 2.49
NPLOC4-217ENST00000574897 EXOSC9Q06265 439 aaKnown RBP30.58■■■□□ 2.49
NPLOC4-217ENST00000574897 CDK12Q9NYV4 1490 aaPredicted RBP30.58■■■□□ 2.49
NPLOC4-217ENST00000574897 PHACTR3Q96KR7 559 aa30.57■■■□□ 2.48
NPLOC4-217ENST00000574897 MS4A1P11836 297 aa30.57■■■□□ 2.48
NPLOC4-217ENST00000574897 IL13P35225 146 aa30.56■■■□□ 2.48
NPLOC4-217ENST00000574897 ZNF692Q9BU19 519 aaPredicted RBP30.56■■■□□ 2.48
NPLOC4-217ENST00000574897 AATKQ6ZMQ8 1374 aa30.55■■■□□ 2.48
NPLOC4-217ENST00000574897 CLUAP1Q96AJ1 413 aa30.55■■■□□ 2.48
NPLOC4-217ENST00000574897 BACH2Q9BYV9 841 aa30.55■■■□□ 2.48
NPLOC4-217ENST00000574897 THEMISQ8N1K5 641 aaPredicted RBP30.54■■■□□ 2.48
NPLOC4-217ENST00000574897 IGHDP01880 384 aa30.54■■■□□ 2.48
NPLOC4-217ENST00000574897 PNNQ9H307 717 aaKnown RBP30.54■■■□□ 2.48
NPLOC4-217ENST00000574897 TBX22Q9Y458 520 aa30.53■■■□□ 2.48
NPLOC4-217ENST00000574897 TTC21BQ7Z4L5 1316 aa30.53■■■□□ 2.48
NPLOC4-217ENST00000574897 DLG5Q8TDM6 1919 aa30.52■■■□□ 2.48
NPLOC4-217ENST00000574897 RIMS1Q86UR5 1692 aaKnown RBP30.51■■■□□ 2.47
NPLOC4-217ENST00000574897 PLEKHG3A1L390 1219 aa30.5■■■□□ 2.47
NPLOC4-217ENST00000574897 USP6P35125 1406 aa30.49■■■□□ 2.47
NPLOC4-217ENST00000574897 IL16Q14005 1332 aa30.49■■■□□ 2.47
NPLOC4-217ENST00000574897 PMFBP1Q8TBY8 1022 aa30.49■■■□□ 2.47
NPLOC4-217ENST00000574897 THUMPD2Q9BTF0 503 aaKnown RBP30.49■■■□□ 2.47
NPLOC4-217ENST00000574897 NPM2Q86SE8 214 aaKnown RBP30.48■■■□□ 2.47
NPLOC4-217ENST00000574897 PTCH1Q13635 1447 aa30.47■■■□□ 2.47
NPLOC4-217ENST00000574897 ANP32AP39687 249 aaKnown RBP30.47■■■□□ 2.47
NPLOC4-217ENST00000574897 DIP2AQ14689 1571 aa30.46■■■□□ 2.47
NPLOC4-217ENST00000574897 CEP170BQ9Y4F5 1589 aaPredicted RBP30.46■■■□□ 2.47
NPLOC4-217ENST00000574897 XRN1Q8IZH2 1706 aaKnown RBP30.46■■■□□ 2.47
NPLOC4-217ENST00000574897 RGS3P49796 1198 aa30.46■■■□□ 2.47
NPLOC4-217ENST00000574897 SSH1Q8WYL5 1049 aa30.46■■■□□ 2.47
NPLOC4-217ENST00000574897 SMC4Q9NTJ3 1288 aa30.46■■■□□ 2.47
NPLOC4-217ENST00000574897 OVOS2A0A0J9YW53 1432 aa30.45■■■□□ 2.47
NPLOC4-217ENST00000574897 OVOS2Q6IE36 1432 aa30.45■■■□□ 2.47
NPLOC4-217ENST00000574897 NEFMP07197 916 aa30.45■■■□□ 2.47
NPLOC4-217ENST00000574897 NFE2L2Q16236 605 aa30.45■■■□□ 2.47
NPLOC4-217ENST00000574897 LAS1LQ9Y4W2 734 aaKnown RBP30.44■■■□□ 2.46
NPLOC4-217ENST00000574897 NALCNQ8IZF0 1738 aa30.44■■■□□ 2.46
NPLOC4-217ENST00000574897 PEAK1Q9H792 1746 aa30.43■■■□□ 2.46
NPLOC4-217ENST00000574897 SOX12O15370 315 aa30.43■■■□□ 2.46
NPLOC4-217ENST00000574897 ERICH6Q7L0X2 663 aa30.43■■■□□ 2.46
NPLOC4-217ENST00000574897 CT47B1P0C2W7 299 aaPredicted RBP30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms