RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 IQSEC2Q5JU85 1478 aa18.77■□□□□ 0.6
ABR-228ENST00000574437 MCM4P33991 863 aa18.77■□□□□ 0.6
ABR-228ENST00000574437 NOB1Q9ULX3 412 aaKnown RBP18.77■□□□□ 0.6
ABR-228ENST00000574437 GOLGA6L3A6NEY3 463 aa18.77■□□□□ 0.59
ABR-228ENST00000574437 SHPRHQ149N8 1683 aa18.76■□□□□ 0.59
ABR-228ENST00000574437 SLC52A1Q9NWF4 448 aa18.76■□□□□ 0.59
ABR-228ENST00000574437 TMPOP42166 694 aaKnown RBP18.76■□□□□ 0.59
ABR-228ENST00000574437 DDX19BQ9UMR2 479 aa18.76■□□□□ 0.59
ABR-228ENST00000574437 ATF7IPQ6VMQ6 1270 aa18.75■□□□□ 0.59
ABR-228ENST00000574437 HSCBQ8IWL3 235 aa18.75■□□□□ 0.59
ABR-228ENST00000574437 CEBPAP49715 358 aaPredicted RBP18.75■□□□□ 0.59
ABR-228ENST00000574437 TMEM57Q8N5G2 664 aa18.75■□□□□ 0.59
ABR-228ENST00000574437 CHMP5Q9NZZ3 219 aa18.75■□□□□ 0.59
ABR-228ENST00000574437 VGFO15240 615 aaPredicted RBP18.74■□□□□ 0.59
ABR-228ENST00000574437 RIPK4P57078 832 aa18.74■□□□□ 0.59
ABR-228ENST00000574437 LNPKQ9C0E8 428 aa18.74■□□□□ 0.59
ABR-228ENST00000574437 RRAGDQ9NQL2 400 aaPredicted RBP18.73■□□□□ 0.59
ABR-228ENST00000574437 ADGRB3O60242 1522 aa18.73■□□□□ 0.59
ABR-228ENST00000574437 PANK2Q9BZ23 570 aa18.72■□□□□ 0.59
ABR-228ENST00000574437 XRCC6P12956 609 aaKnown RBP eCLIP18.72■□□□□ 0.59
ABR-228ENST00000574437 TRAK2O60296 914 aa18.71■□□□□ 0.59
ABR-228ENST00000574437 RSPH6AQ9H0K4 717 aa18.71■□□□□ 0.59
ABR-228ENST00000574437 TRIM35Q9UPQ4 493 aa18.71■□□□□ 0.59
ABR-228ENST00000574437 ARHGAP31Q2M1Z3 1444 aa18.71■□□□□ 0.59
ABR-228ENST00000574437 ANKRD36BQ8N2N9 1353 aa18.71■□□□□ 0.59
ABR-228ENST00000574437 NRXN1Q9ULB1 1477 aa18.7■□□□□ 0.58
ABR-228ENST00000574437 HDAC1Q13547 482 aaPredicted RBP18.7■□□□□ 0.58
ABR-228ENST00000574437 QRICH2Q9H0J4 1663 aa18.7■□□□□ 0.58
ABR-228ENST00000574437 MINK1Q8N4C8 1332 aaPredicted RBP18.7■□□□□ 0.58
ABR-228ENST00000574437 CT47B1P0C2W7 299 aaPredicted RBP18.69■□□□□ 0.58
ABR-228ENST00000574437 RPGRIP1LQ68CZ1 1315 aa18.69■□□□□ 0.58
ABR-228ENST00000574437 ZMYM3Q14202 1370 aa18.69■□□□□ 0.58
ABR-228ENST00000574437 FOXD4L1Q9NU39 408 aa18.68■□□□□ 0.58
ABR-228ENST00000574437 HSP90AA1P07900 732 aaKnown RBP18.68■□□□□ 0.58
ABR-228ENST00000574437 IPO8O15397 1037 aaKnown RBP18.67■□□□□ 0.58
ABR-228ENST00000574437 MYO3AQ8NEV4 1616 aa18.67■□□□□ 0.58
ABR-228ENST00000574437 PLEKHF1Q96S99 279 aa18.67■□□□□ 0.58
ABR-228ENST00000574437 NEURL4Q96JN8 1562 aa18.67■□□□□ 0.58
ABR-228ENST00000574437 SMC5Q8IY18 1101 aa18.67■□□□□ 0.58
ABR-228ENST00000574437 HSP90AB1P08238 724 aaKnown RBP18.66■□□□□ 0.58
ABR-228ENST00000574437 A0A1W2PP64 1363 aa18.66■□□□□ 0.58
ABR-228ENST00000574437 DIAPH1O60610 1272 aaKnown RBP18.65■□□□□ 0.58
ABR-228ENST00000574437 C1orf115Q9H7X2 142 aa18.65■□□□□ 0.58
ABR-228ENST00000574437 ZBTB40Q9NUA8 1239 aa18.65■□□□□ 0.58
ABR-228ENST00000574437 SETBP1Q9Y6X0 1596 aa18.65■□□□□ 0.58
ABR-228ENST00000574437 NSD2O96028 1365 aa18.65■□□□□ 0.58
ABR-228ENST00000574437 IFT172Q9UG01 1749 aa18.65■□□□□ 0.58
ABR-228ENST00000574437 ELL2O00472 640 aaPredicted RBP18.65■□□□□ 0.58
ABR-228ENST00000574437 FBLN1P23142 703 aa18.65■□□□□ 0.58
ABR-228ENST00000574437 ANKRD45Q5TZF3 282 aa18.65■□□□□ 0.58
ABR-228ENST00000574437 CLTCQ00610 1675 aaKnown RBP18.64■□□□□ 0.58
ABR-228ENST00000574437 KIF16BQ96L93 1317 aa18.64■□□□□ 0.57
ABR-228ENST00000574437 ADGRB1O14514 1584 aa18.64■□□□□ 0.57
ABR-228ENST00000574437 FYB1O15117 783 aa18.64■□□□□ 0.57
ABR-228ENST00000574437 TERF2IPQ9NYB0 399 aa18.63■□□□□ 0.57
ABR-228ENST00000574437 MYO5BQ9ULV0 1848 aa18.63■□□□□ 0.57
ABR-228ENST00000574437 CHD1LQ86WJ1 897 aa18.63■□□□□ 0.57
ABR-228ENST00000574437 PREX1Q8TCU6 1659 aa18.62■□□□□ 0.57
ABR-228ENST00000574437 PIK3C2BO00750 1634 aa18.62■□□□□ 0.57
ABR-228ENST00000574437 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.62■□□□□ 0.57
ABR-228ENST00000574437 NAP1L5Q96NT1 182 aaPredicted RBP18.62■□□□□ 0.57
ABR-228ENST00000574437 THUMPD2Q9BTF0 503 aaKnown RBP18.62■□□□□ 0.57
ABR-228ENST00000574437 PPP6R1Q9UPN7 881 aa18.62■□□□□ 0.57
ABR-228ENST00000574437 PPLO60437 1756 aa18.61■□□□□ 0.57
ABR-228ENST00000574437 AGLP35573 1532 aa18.61■□□□□ 0.57
ABR-228ENST00000574437 NEXMIFQ5QGS0 1516 aa18.61■□□□□ 0.57
ABR-228ENST00000574437 FSD2A1L4K1 749 aa18.61■□□□□ 0.57
ABR-228ENST00000574437 DDX11L8A8MPP1 907 aa18.61■□□□□ 0.57
ABR-228ENST00000574437 NUCB1Q02818 461 aa18.61■□□□□ 0.57
ABR-228ENST00000574437 TULP4Q9NRJ4 1543 aa18.61■□□□□ 0.57
ABR-228ENST00000574437 PRAM1Q96QH2 718 aa18.61■□□□□ 0.57
ABR-228ENST00000574437 HMOX1P09601 288 aa18.6■□□□□ 0.57
ABR-228ENST00000574437 NCBP3Q53F19 620 aaKnown RBP18.6■□□□□ 0.57
ABR-228ENST00000574437 PRKAR2BP31323 418 aa18.6■□□□□ 0.57
ABR-228ENST00000574437 ARHGEF40Q8TER5 1519 aa18.59■□□□□ 0.57
ABR-228ENST00000574437 ABCC11Q96J66 1382 aa18.59■□□□□ 0.57
ABR-228ENST00000574437 PUS7Q96PZ0 661 aaKnown RBP18.58■□□□□ 0.57
ABR-228ENST00000574437 PNNQ9H307 717 aaKnown RBP18.58■□□□□ 0.57
ABR-228ENST00000574437 MRE11P49959 708 aa18.58■□□□□ 0.57
ABR-228ENST00000574437 HDGFL2Q7Z4V5 671 aaPredicted RBP18.58■□□□□ 0.57
ABR-228ENST00000574437 TNPO1Q92973 898 aaKnown RBP18.58■□□□□ 0.57
ABR-228ENST00000574437 ZC3H13Q5T200 1668 aaKnown RBP18.58■□□□□ 0.56
ABR-228ENST00000574437 WAPLQ7Z5K2 1190 aa18.58■□□□□ 0.56
ABR-228ENST00000574437 GRPEL1Q9HAV7 217 aa18.57■□□□□ 0.56
ABR-228ENST00000574437 IL16Q14005 1332 aa18.57■□□□□ 0.56
ABR-228ENST00000574437 CABP1Q9NZU7 370 aa18.56■□□□□ 0.56
ABR-228ENST00000574437 TMEM131LA2VDJ0 1609 aa18.56■□□□□ 0.56
ABR-228ENST00000574437 ZNF692Q9BU19 519 aaPredicted RBP18.56■□□□□ 0.56
ABR-228ENST00000574437 RBM25P49756 843 aaKnown RBP18.56■□□□□ 0.56
ABR-228ENST00000574437 RBM42Q9BTD8 480 aaKnown RBP18.55■□□□□ 0.56
ABR-228ENST00000574437 ADGRB2O60241 1585 aa18.55■□□□□ 0.56
ABR-228ENST00000574437 GBP4Q96PP9 640 aa18.55■□□□□ 0.56
ABR-228ENST00000574437 USP32Q8NFA0 1604 aa18.54■□□□□ 0.56
ABR-228ENST00000574437 ALDH1L2Q3SY69 923 aa18.54■□□□□ 0.56
ABR-228ENST00000574437 TSPYL6Q8N831 410 aa18.54■□□□□ 0.56
ABR-228ENST00000574437 REREQ9P2R6 1566 aa18.54■□□□□ 0.56
ABR-228ENST00000574437 A2ML1A8K2U0 1454 aa18.53■□□□□ 0.56
ABR-228ENST00000574437 CD2BP2O95400 341 aaKnown RBP18.53■□□□□ 0.56
ABR-228ENST00000574437 BMP2KLQ5H9B9 411 aa18.53■□□□□ 0.56
ABR-228ENST00000574437 CDK19Q9BWU1 502 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms