RNA–Protein interactions for RNA: ENST00000569110.1

TSC2-225, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 1,687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-225ENST00000569110 IQSEC2Q5JU85 1478 aa22.35■■□□□ 1.17
TSC2-225ENST00000569110 TNNT2P45379 298 aaPredicted RBP22.33■■□□□ 1.17
TSC2-225ENST00000569110 NGDNQ8NEJ9 315 aaKnown RBP22.33■■□□□ 1.16
TSC2-225ENST00000569110 TTC21BQ7Z4L5 1316 aa22.33■■□□□ 1.16
TSC2-225ENST00000569110 UBAP1LF5GYI3 381 aa22.32■■□□□ 1.16
TSC2-225ENST00000569110 NME9Q86XW9 330 aa22.32■■□□□ 1.16
TSC2-225ENST00000569110 LRRC7Q96NW7 1537 aa22.31■■□□□ 1.16
TSC2-225ENST00000569110 PHF8Q9UPP1 1060 aa22.31■■□□□ 1.16
TSC2-225ENST00000569110 DCCP43146 1447 aa22.31■■□□□ 1.16
TSC2-225ENST00000569110 TOM1O60784 492 aa22.3■■□□□ 1.16
TSC2-225ENST00000569110 CENPBP07199 599 aaPredicted RBP22.3■■□□□ 1.16
TSC2-225ENST00000569110 ZRANB1Q9UGI0 708 aa22.3■■□□□ 1.16
TSC2-225ENST00000569110 MAP2P11137 1827 aaKnown RBP22.29■■□□□ 1.16
TSC2-225ENST00000569110 SCAF1Q9H7N4 1312 aaKnown RBP22.28■■□□□ 1.16
TSC2-225ENST00000569110 ESCO1Q5FWF5 840 aa22.28■■□□□ 1.16
TSC2-225ENST00000569110 C1orf167Q5SNV9 1468 aa22.27■■□□□ 1.16
TSC2-225ENST00000569110 MTHFSP49914 203 aa22.27■■□□□ 1.16
TSC2-225ENST00000569110 TTC21AQ8NDW8 1320 aa22.26■■□□□ 1.15
TSC2-225ENST00000569110 ATF3P18847 181 aa22.26■■□□□ 1.15
TSC2-225ENST00000569110 HNRNPUQ00839 825 aaKnown RBP eCLIP22.26■■□□□ 1.15
TSC2-225ENST00000569110 MST1RQ04912 1400 aa22.26■■□□□ 1.15
TSC2-225ENST00000569110 ORAI2Q96SN7 254 aa22.26■■□□□ 1.15
TSC2-225ENST00000569110 PIK3C2AO00443 1686 aa22.24■■□□□ 1.15
TSC2-225ENST00000569110 ILDR1Q86SU0 546 aaPredicted RBP22.24■■□□□ 1.15
TSC2-225ENST00000569110 COG3Q96JB2 828 aa22.24■■□□□ 1.15
TSC2-225ENST00000569110 MSH6P52701 1360 aa22.24■■□□□ 1.15
TSC2-225ENST00000569110 SHPRHQ149N8 1683 aa22.24■■□□□ 1.15
TSC2-225ENST00000569110 KIF1AQ12756 1690 aa22.23■■□□□ 1.15
TSC2-225ENST00000569110 OVOS2A0A0J9YW53 1432 aa22.23■■□□□ 1.15
TSC2-225ENST00000569110 OVOS2Q6IE36 1432 aa22.23■■□□□ 1.15
TSC2-225ENST00000569110 CADPS2Q86UW7 1296 aa22.23■■□□□ 1.15
TSC2-225ENST00000569110 INSRP06213 1382 aa22.23■■□□□ 1.15
TSC2-225ENST00000569110 PIP4K2BP78356 416 aa22.22■■□□□ 1.15
TSC2-225ENST00000569110 MARF1Q9Y4F3 1742 aaKnown RBP22.21■■□□□ 1.15
TSC2-225ENST00000569110 FBLN1P23142 703 aa22.21■■□□□ 1.15
TSC2-225ENST00000569110 ADAMTS8Q9UP79 889 aa22.21■■□□□ 1.15
TSC2-225ENST00000569110 USP54Q70EL1 1684 aa22.21■■□□□ 1.15
TSC2-225ENST00000569110 AATKQ6ZMQ8 1374 aa22.21■■□□□ 1.15
TSC2-225ENST00000569110 USP31Q70CQ4 1352 aa22.2■■□□□ 1.14
TSC2-225ENST00000569110 POLKQ9UBT6 870 aa22.19■■□□□ 1.14
TSC2-225ENST00000569110 BLMP54132 1417 aaPredicted RBP22.18■■□□□ 1.14
TSC2-225ENST00000569110 PSME1Q06323 249 aa22.18■■□□□ 1.14
TSC2-225ENST00000569110 WDR43Q15061 677 aaKnown RBP eCLIP22.18■■□□□ 1.14
TSC2-225ENST00000569110 COL3A1P02461 1466 aaPredicted RBP22.17■■□□□ 1.14
TSC2-225ENST00000569110 FOXO3O43524 673 aa22.17■■□□□ 1.14
TSC2-225ENST00000569110 CFAP53Q96M91 514 aa22.17■■□□□ 1.14
TSC2-225ENST00000569110 PNPLA6Q8IY17 1366 aa22.17■■□□□ 1.14
TSC2-225ENST00000569110 TRPM3Q9HCF6 1732 aaPredicted RBP22.17■■□□□ 1.14
TSC2-225ENST00000569110 SMG6Q86US8 1419 aaKnown RBP22.16■■□□□ 1.14
TSC2-225ENST00000569110 ZBED9Q6R2W3 1325 aa22.14■■□□□ 1.14
TSC2-225ENST00000569110 PAK3O75914 559 aaPredicted RBP22.14■■□□□ 1.13
TSC2-225ENST00000569110 ABTB2Q8N961 1025 aa22.13■■□□□ 1.13
TSC2-225ENST00000569110 EMILIN1Q9Y6C2 1016 aa22.13■■□□□ 1.13
TSC2-225ENST00000569110 NLRP6P59044 892 aa22.12■■□□□ 1.13
TSC2-225ENST00000569110 RRS1Q15050 365 aaKnown RBP22.11■■□□□ 1.13
TSC2-225ENST00000569110 XPCQ01831 940 aaPredicted RBP22.11■■□□□ 1.13
TSC2-225ENST00000569110 KRT28Q7Z3Y7 464 aa22.11■■□□□ 1.13
TSC2-225ENST00000569110 CDK12Q9NYV4 1490 aaPredicted RBP22.1■■□□□ 1.13
TSC2-225ENST00000569110 NUTM2GQ5VZR2 741 aa22.1■■□□□ 1.13
TSC2-225ENST00000569110 SLAIN2Q9P270 581 aa22.1■■□□□ 1.13
TSC2-225ENST00000569110 PEAK1Q9H792 1746 aa22.09■■□□□ 1.13
TSC2-225ENST00000569110 SENP3-EIF4A1A0A087X0R7 540 aa22.08■■□□□ 1.13
TSC2-225ENST00000569110 PPM1GO15355 546 aaPredicted RBP22.08■■□□□ 1.13
TSC2-225ENST00000569110 ALS2Q96Q42 1657 aa22.08■■□□□ 1.13
TSC2-225ENST00000569110 DIAPH1O60610 1272 aaKnown RBP22.07■■□□□ 1.12
TSC2-225ENST00000569110 BRINP3Q76B58 766 aa22.07■■□□□ 1.12
TSC2-225ENST00000569110 DDX17Q92841 729 aaKnown RBP22.07■■□□□ 1.12
TSC2-225ENST00000569110 NPHP3Q7Z494 1330 aa22.05■■□□□ 1.12
TSC2-225ENST00000569110 CCDC146Q8IYE0 955 aa22.04■■□□□ 1.12
TSC2-225ENST00000569110 NUDCQ9Y266 331 aa22.04■■□□□ 1.12
TSC2-225ENST00000569110 PXDNQ92626 1479 aa22.04■■□□□ 1.12
TSC2-225ENST00000569110 SOX12O15370 315 aa22.04■■□□□ 1.12
TSC2-225ENST00000569110 MAP3K19Q56UN5 1328 aa22.03■■□□□ 1.12
TSC2-225ENST00000569110 SBNO1A3KN83 1393 aa22.02■■□□□ 1.12
TSC2-225ENST00000569110 U2AF1L5P0DN76 240 aaPredicted RBP22.02■■□□□ 1.12
TSC2-225ENST00000569110 IL13P35225 146 aa22.02■■□□□ 1.12
TSC2-225ENST00000569110 U2AF1Q01081 240 aaKnown RBP eCLIP22.02■■□□□ 1.12
TSC2-225ENST00000569110 NFAT5O94916 1531 aa22.02■■□□□ 1.12
TSC2-225ENST00000569110 LTN1O94822 1766 aa22.02■■□□□ 1.12
TSC2-225ENST00000569110 SLIT3O75094 1523 aa22.01■■□□□ 1.11
TSC2-225ENST00000569110 U2SURPO15042 1029 aaKnown RBP22.01■■□□□ 1.11
TSC2-225ENST00000569110 RUNDC1Q96C34 613 aa21.99■■□□□ 1.11
TSC2-225ENST00000569110 SALL2Q9Y467 1007 aaPredicted RBP21.99■■□□□ 1.11
TSC2-225ENST00000569110 USP19O94966 1318 aa21.99■■□□□ 1.11
TSC2-225ENST00000569110 APAF1O14727 1248 aa21.98■■□□□ 1.11
TSC2-225ENST00000569110 HSP90AB2PQ58FF8 381 aa21.98■■□□□ 1.11
TSC2-225ENST00000569110 LMOD2Q6P5Q4 547 aa21.98■■□□□ 1.11
TSC2-225ENST00000569110 FLT4P35916 1363 aa21.97■■□□□ 1.11
TSC2-225ENST00000569110 NHSL1Q5SYE7 1610 aa21.97■■□□□ 1.11
TSC2-225ENST00000569110 KIF24Q5T7B8 1368 aa21.97■■□□□ 1.11
TSC2-225ENST00000569110 KCNH5Q8NCM2 988 aa21.97■■□□□ 1.11
TSC2-225ENST00000569110 TNS3Q68CZ2 1445 aa21.96■■□□□ 1.11
TSC2-225ENST00000569110 MED1Q15648 1581 aaPredicted RBP21.96■■□□□ 1.11
TSC2-225ENST00000569110 HSPA1LP34931 641 aa21.96■■□□□ 1.11
TSC2-225ENST00000569110 EIF4A2Q14240 407 aaKnown RBP21.96■■□□□ 1.11
TSC2-225ENST00000569110 PLEKHF1Q96S99 279 aa21.96■■□□□ 1.11
TSC2-225ENST00000569110 SOS2Q07890 1332 aaPredicted RBP21.96■■□□□ 1.11
TSC2-225ENST00000569110 SPATA31A3Q5VYP0 1347 aa21.96■■□□□ 1.11
TSC2-225ENST00000569110 PHRF1Q9P1Y6 1649 aaKnown RBP21.95■■□□□ 1.11
TSC2-225ENST00000569110 RGPD1P0DJD0 1748 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms