RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 MRS2Q9HD23 443 aa12.72□□□□□ -0.37
CNOT1-214ENST00000568917 POGKQ9P215 609 aa12.72□□□□□ -0.37
CNOT1-214ENST00000568917 METP08581 1390 aa12.72□□□□□ -0.37
CNOT1-214ENST00000568917 PRAM1Q96QH2 718 aa12.71□□□□□ -0.37
CNOT1-214ENST00000568917 TBX22Q9Y458 520 aa12.71□□□□□ -0.37
CNOT1-214ENST00000568917 INSRP06213 1382 aa12.71□□□□□ -0.38
CNOT1-214ENST00000568917 PIK3R4Q99570 1358 aa12.71□□□□□ -0.38
CNOT1-214ENST00000568917 LTKP29376 864 aa12.7□□□□□ -0.38
CNOT1-214ENST00000568917 DCBLD2Q96PD2 775 aa12.7□□□□□ -0.38
CNOT1-214ENST00000568917 ADGRB2O60241 1585 aa12.7□□□□□ -0.38
CNOT1-214ENST00000568917 ANKRD36BQ8N2N9 1353 aa12.7□□□□□ -0.38
CNOT1-214ENST00000568917 STK26Q9P289 416 aa12.69□□□□□ -0.38
CNOT1-214ENST00000568917 PCDHB8Q9UN66 801 aa12.69□□□□□ -0.38
CNOT1-214ENST00000568917 PTCH1Q13635 1447 aa12.68□□□□□ -0.38
CNOT1-214ENST00000568917 NSD2O96028 1365 aa12.68□□□□□ -0.38
CNOT1-214ENST00000568917 TMC1Q8TDI8 760 aa12.66□□□□□ -0.38
CNOT1-214ENST00000568917 BMP2KQ9NSY1 1161 aaPredicted RBP12.66□□□□□ -0.38
CNOT1-214ENST00000568917 CCDC184Q52MB2 194 aa12.65□□□□□ -0.38
CNOT1-214ENST00000568917 ASTLQ6HA08 431 aaPredicted RBP12.65□□□□□ -0.38
CNOT1-214ENST00000568917 BCANQ96GW7 911 aa12.65□□□□□ -0.38
CNOT1-214ENST00000568917 XRN1Q8IZH2 1706 aaKnown RBP12.65□□□□□ -0.38
CNOT1-214ENST00000568917 ATP7BP35670 1465 aa12.65□□□□□ -0.38
CNOT1-214ENST00000568917 ATMINO43313 823 aaPredicted RBP12.64□□□□□ -0.39
CNOT1-214ENST00000568917 SRPK2P78362 688 aaKnown RBP12.64□□□□□ -0.39
CNOT1-214ENST00000568917 CC2D1BQ5T0F9 858 aaKnown RBP12.64□□□□□ -0.39
CNOT1-214ENST00000568917 ANKLE2Q86XL3 938 aa12.64□□□□□ -0.39
CNOT1-214ENST00000568917 PELP1Q8IZL8 1130 aaKnown RBP12.64□□□□□ -0.39
CNOT1-214ENST00000568917 PNISRQ8TF01 805 aaKnown RBP12.64□□□□□ -0.39
CNOT1-214ENST00000568917 MINK1Q8N4C8 1332 aaPredicted RBP12.64□□□□□ -0.39
CNOT1-214ENST00000568917 NSD3Q9BZ95 1437 aa12.64□□□□□ -0.39
CNOT1-214ENST00000568917 CDK19Q9BWU1 502 aa12.63□□□□□ -0.39
CNOT1-214ENST00000568917 CARD14Q9BXL6 1004 aa12.63□□□□□ -0.39
CNOT1-214ENST00000568917 SLC12A5Q9H2X9 1139 aa12.63□□□□□ -0.39
CNOT1-214ENST00000568917 TERF2IPQ9NYB0 399 aa12.63□□□□□ -0.39
CNOT1-214ENST00000568917 CGNL1Q0VF96 1302 aa12.63□□□□□ -0.39
CNOT1-214ENST00000568917 PLEKHH1Q9ULM0 1364 aa12.63□□□□□ -0.39
CNOT1-214ENST00000568917 WASLO00401 505 aaPredicted RBP12.62□□□□□ -0.39
CNOT1-214ENST00000568917 TIE1P35590 1138 aa12.62□□□□□ -0.39
CNOT1-214ENST00000568917 CABP2Q9NPB3 220 aa12.62□□□□□ -0.39
CNOT1-214ENST00000568917 ANKRD26Q9UPS8 1709 aa12.62□□□□□ -0.39
CNOT1-214ENST00000568917 ROBO2Q9HCK4 1378 aa12.62□□□□□ -0.39
CNOT1-214ENST00000568917 SAFB2Q14151 953 aaKnown RBP eCLIP12.62□□□□□ -0.39
CNOT1-214ENST00000568917 WAPLQ7Z5K2 1190 aa12.62□□□□□ -0.39
CNOT1-214ENST00000568917 PTPRUQ92729 1446 aa12.61□□□□□ -0.39
CNOT1-214ENST00000568917 CHD2O14647 1828 aaKnown RBP12.61□□□□□ -0.39
CNOT1-214ENST00000568917 TTLL13PA6NNM8 815 aa12.61□□□□□ -0.39
CNOT1-214ENST00000568917 PPP2R1AP30153 589 aa12.61□□□□□ -0.39
CNOT1-214ENST00000568917 HDGFL2Q7Z4V5 671 aaPredicted RBP12.61□□□□□ -0.39
CNOT1-214ENST00000568917 ZNF467Q7Z7K2 595 aaPredicted RBP12.61□□□□□ -0.39
CNOT1-214ENST00000568917 FAM9BQ8IZU0 186 aa12.61□□□□□ -0.39
CNOT1-214ENST00000568917 RNF25Q96BH1 459 aaPredicted RBP12.61□□□□□ -0.39
CNOT1-214ENST00000568917 ZBED9Q6R2W3 1325 aa12.6□□□□□ -0.39
CNOT1-214ENST00000568917 CD163L1Q9NR16 1453 aa12.6□□□□□ -0.39
CNOT1-214ENST00000568917 A0A1W2PP64 1363 aa12.6□□□□□ -0.39
CNOT1-214ENST00000568917 ATN1P54259 1190 aaPredicted RBP12.6□□□□□ -0.39
CNOT1-214ENST00000568917 HNRNPUQ00839 825 aaKnown RBP eCLIP12.6□□□□□ -0.39
CNOT1-214ENST00000568917 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.6□□□□□ -0.39
CNOT1-214ENST00000568917 AMOTL2Q9Y2J4 779 aa12.6□□□□□ -0.39
CNOT1-214ENST00000568917 TOPAZ1Q8N9V7 1692 aa12.59□□□□□ -0.39
CNOT1-214ENST00000568917 CDC42BPGQ6DT37 1551 aa12.59□□□□□ -0.39
CNOT1-214ENST00000568917 SLC26A8Q96RN1 970 aa12.59□□□□□ -0.39
CNOT1-214ENST00000568917 ITSN1Q15811 1721 aa12.58□□□□□ -0.4
CNOT1-214ENST00000568917 CPSF1Q10570 1443 aaKnown RBP12.58□□□□□ -0.4
CNOT1-214ENST00000568917 KIF20BQ96Q89 1820 aa12.58□□□□□ -0.4
CNOT1-214ENST00000568917 AKAP12Q02952 1782 aa12.57□□□□□ -0.4
CNOT1-214ENST00000568917 POLR3AO14802 1390 aaPredicted RBP12.57□□□□□ -0.4
CNOT1-214ENST00000568917 NPHP4O75161 1426 aaPredicted RBP12.57□□□□□ -0.4
CNOT1-214ENST00000568917 MON2Q7Z3U7 1717 aa12.57□□□□□ -0.4
CNOT1-214ENST00000568917 EDC4Q6P2E9 1401 aaKnown RBP12.56□□□□□ -0.4
CNOT1-214ENST00000568917 PPIP5K1Q6PFW1 1433 aa12.56□□□□□ -0.4
CNOT1-214ENST00000568917 ECM2O94769 699 aaPredicted RBP12.56□□□□□ -0.4
CNOT1-214ENST00000568917 CNGB1Q14028 1251 aaPredicted RBP12.56□□□□□ -0.4
CNOT1-214ENST00000568917 NWD1Q149M9 1564 aa12.56□□□□□ -0.4
CNOT1-214ENST00000568917 BLMP54132 1417 aaPredicted RBP12.55□□□□□ -0.4
CNOT1-214ENST00000568917 MORC1Q86VD1 984 aa12.55□□□□□ -0.4
CNOT1-214ENST00000568917 TMEM106CQ9BVX2 250 aa12.55□□□□□ -0.4
CNOT1-214ENST00000568917 ANKARQ7Z5J8 1434 aa12.54□□□□□ -0.4
CNOT1-214ENST00000568917 NUDT16Q96DE0 195 aaKnown RBP12.54□□□□□ -0.4
CNOT1-214ENST00000568917 CABP1Q9NZU7 370 aa12.54□□□□□ -0.4
CNOT1-214ENST00000568917 PLEKHG3A1L390 1219 aa12.53□□□□□ -0.4
CNOT1-214ENST00000568917 PSEN1P49768 467 aa12.52□□□□□ -0.41
CNOT1-214ENST00000568917 FMN2Q9NZ56 1722 aa12.52□□□□□ -0.41
CNOT1-214ENST00000568917 NRKQ7Z2Y5 1582 aa12.51□□□□□ -0.41
CNOT1-214ENST00000568917 WDR43Q15061 677 aaKnown RBP eCLIP12.51□□□□□ -0.41
CNOT1-214ENST00000568917 NGEFQ8N5V2 710 aa12.51□□□□□ -0.41
CNOT1-214ENST00000568917 NKTRP30414 1462 aaKnown RBP12.5□□□□□ -0.41
CNOT1-214ENST00000568917 RIOK3O14730 519 aaKnown RBP12.5□□□□□ -0.41
CNOT1-214ENST00000568917 FYB1O15117 783 aa12.5□□□□□ -0.41
CNOT1-214ENST00000568917 RGL2O15211 777 aa12.5□□□□□ -0.41
CNOT1-214ENST00000568917 KCNA6P17658 529 aa12.5□□□□□ -0.41
CNOT1-214ENST00000568917 PDE3BQ13370 1112 aa12.5□□□□□ -0.41
CNOT1-214ENST00000568917 PDAP1Q13442 181 aaKnown RBP12.5□□□□□ -0.41
CNOT1-214ENST00000568917 CFAP53Q96M91 514 aa12.5□□□□□ -0.41
CNOT1-214ENST00000568917 TRIM35Q9UPQ4 493 aa12.5□□□□□ -0.41
CNOT1-214ENST00000568917 PRR36Q9H6K5 1346 aa12.49□□□□□ -0.41
CNOT1-214ENST00000568917 GTF3C3Q9Y5Q9 886 aa12.49□□□□□ -0.41
CNOT1-214ENST00000568917 NALCNQ8IZF0 1738 aa12.49□□□□□ -0.41
CNOT1-214ENST00000568917 ADGRL3Q9HAR2 1447 aa12.48□□□□□ -0.41
CNOT1-214ENST00000568917 NCOA3Q9Y6Q9 1424 aa12.48□□□□□ -0.41
CNOT1-214ENST00000568917 SHPRHQ149N8 1683 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms