RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 PDCL2Q8N4E4 241 aa19.8■□□□□ 0.76
TSC2-222ENST00000568454 CT47B1P0C2W7 299 aaPredicted RBP19.79■□□□□ 0.76
TSC2-222ENST00000568454 KIAA0754O94854 1291 aa19.79■□□□□ 0.76
TSC2-222ENST00000568454 EPS15P42566 896 aa19.79■□□□□ 0.76
TSC2-222ENST00000568454 FMNL2Q96PY5 1086 aa19.79■□□□□ 0.76
TSC2-222ENST00000568454 TNMDQ9H2S6 317 aa19.78■□□□□ 0.76
TSC2-222ENST00000568454 USP8P40818 1118 aa19.78■□□□□ 0.76
TSC2-222ENST00000568454 WASHC4Q2M389 1173 aa19.78■□□□□ 0.76
TSC2-222ENST00000568454 STK38Q15208 465 aa19.77■□□□□ 0.76
TSC2-222ENST00000568454 PPP2R1AP30153 589 aa19.77■□□□□ 0.76
TSC2-222ENST00000568454 JMYQ8N9B5 988 aa19.77■□□□□ 0.76
TSC2-222ENST00000568454 PRKCSHP14314 528 aaPredicted RBP19.77■□□□□ 0.75
TSC2-222ENST00000568454 ODF2Q5BJF6 829 aa19.77■□□□□ 0.75
TSC2-222ENST00000568454 KRT85P78386 507 aa19.76■□□□□ 0.75
TSC2-222ENST00000568454 PODXL2Q9NZ53 605 aa19.76■□□□□ 0.75
TSC2-222ENST00000568454 HMOX1P09601 288 aa19.76■□□□□ 0.75
TSC2-222ENST00000568454 HSP90AB2PQ58FF8 381 aa19.76■□□□□ 0.75
TSC2-222ENST00000568454 TRIM34Q9BYJ4 488 aa19.76■□□□□ 0.75
TSC2-222ENST00000568454 VPS37DQ86XT2 251 aa19.75■□□□□ 0.75
TSC2-222ENST00000568454 NEUROD6Q96NK8 337 aa19.75■□□□□ 0.75
TSC2-222ENST00000568454 KIF21BO75037 1637 aa19.75■□□□□ 0.75
TSC2-222ENST00000568454 SURF6O75683 361 aaKnown RBP19.75■□□□□ 0.75
TSC2-222ENST00000568454 MAGEC2Q9UBF1 373 aaPredicted RBP19.75■□□□□ 0.75
TSC2-222ENST00000568454 FGD5Q6ZNL6 1462 aa19.75■□□□□ 0.75
TSC2-222ENST00000568454 SERPINC1P01008 464 aa19.75■□□□□ 0.75
TSC2-222ENST00000568454 ANKRD1Q15327 319 aa19.75■□□□□ 0.75
TSC2-222ENST00000568454 EXOSC9Q06265 439 aaKnown RBP19.74■□□□□ 0.75
TSC2-222ENST00000568454 CCDC43Q96MW1 224 aaKnown RBP19.74■□□□□ 0.75
TSC2-222ENST00000568454 DACH1Q9UI36 760 aa19.74■□□□□ 0.75
TSC2-222ENST00000568454 GOLGA6L10A6NI86 522 aa19.73■□□□□ 0.75
TSC2-222ENST00000568454 SART3Q15020 963 aaKnown RBP19.73■□□□□ 0.75
TSC2-222ENST00000568454 ZNHIT6Q9NWK9 470 aaKnown RBP19.73■□□□□ 0.75
TSC2-222ENST00000568454 CYP46A1Q9Y6A2 500 aa19.73■□□□□ 0.75
TSC2-222ENST00000568454 CBFA2T2O43439 604 aa19.73■□□□□ 0.75
TSC2-222ENST00000568454 SCAPERQ9BY12 1400 aa19.73■□□□□ 0.75
TSC2-222ENST00000568454 RAD21O60216 631 aa19.73■□□□□ 0.75
TSC2-222ENST00000568454 MTHFSP49914 203 aa19.73■□□□□ 0.75
TSC2-222ENST00000568454 RIC3Q7Z5B4 369 aa19.73■□□□□ 0.75
TSC2-222ENST00000568454 GOLGA6L7A0A1B0GV03 622 aa19.72■□□□□ 0.75
TSC2-222ENST00000568454 PPFIBP1Q86W92 1011 aa19.72■□□□□ 0.75
TSC2-222ENST00000568454 ERC1Q8IUD2 1116 aa19.72■□□□□ 0.75
TSC2-222ENST00000568454 ERLIN2O94905 339 aa19.72■□□□□ 0.75
TSC2-222ENST00000568454 TXLNAP40222 546 aa19.72■□□□□ 0.75
TSC2-222ENST00000568454 CCDC30Q5VVM6 783 aa19.72■□□□□ 0.75
TSC2-222ENST00000568454 HSP90AB3PQ58FF7 597 aa19.71■□□□□ 0.75
TSC2-222ENST00000568454 GGNBP2Q9H3C7 697 aa19.71■□□□□ 0.75
TSC2-222ENST00000568454 PDIA4P13667 645 aaKnown RBP19.7■□□□□ 0.74
TSC2-222ENST00000568454 PNISRQ8TF01 805 aaKnown RBP19.7■□□□□ 0.74
TSC2-222ENST00000568454 TXLNBQ8N3L3 684 aa19.7■□□□□ 0.74
TSC2-222ENST00000568454 CTDP1Q9Y5B0 961 aaPredicted RBP19.7■□□□□ 0.74
TSC2-222ENST00000568454 GNAI2P04899 355 aa19.7■□□□□ 0.74
TSC2-222ENST00000568454 LUC7LQ9NQ29 371 aaKnown RBP19.7■□□□□ 0.74
TSC2-222ENST00000568454 BCAR3O75815 825 aa19.7■□□□□ 0.74
TSC2-222ENST00000568454 GAPVD1Q14C86 1478 aa19.7■□□□□ 0.74
TSC2-222ENST00000568454 KIF2AO00139 706 aaPredicted RBP19.69■□□□□ 0.74
TSC2-222ENST00000568454 NOB1Q9ULX3 412 aaKnown RBP19.69■□□□□ 0.74
TSC2-222ENST00000568454 BRPF1P55201 1214 aaPredicted RBP19.69■□□□□ 0.74
TSC2-222ENST00000568454 MVPQ14764 893 aaKnown RBP19.68■□□□□ 0.74
TSC2-222ENST00000568454 TWISTNBQ3B726 338 aaPredicted RBP19.68■□□□□ 0.74
TSC2-222ENST00000568454 CEP57L1Q8IYX8 460 aa19.68■□□□□ 0.74
TSC2-222ENST00000568454 LRRC9Q6ZRR7 1453 aa19.68■□□□□ 0.74
TSC2-222ENST00000568454 DEF6Q9H4E7 631 aa19.68■□□□□ 0.74
TSC2-222ENST00000568454 NCAPD3P42695 1498 aa19.68■□□□□ 0.74
TSC2-222ENST00000568454 NUP62CLQ9H1M0 184 aa19.68■□□□□ 0.74
TSC2-222ENST00000568454 WDR63Q8IWG1 891 aa19.67■□□□□ 0.74
TSC2-222ENST00000568454 MPNDQ8N594 471 aa19.67■□□□□ 0.74
TSC2-222ENST00000568454 CHD1LQ86WJ1 897 aa19.67■□□□□ 0.74
TSC2-222ENST00000568454 TRHP20396 242 aaPredicted RBP19.67■□□□□ 0.74
TSC2-222ENST00000568454 CEBPZQ03701 1054 aaKnown RBP19.67■□□□□ 0.74
TSC2-222ENST00000568454 ME1P48163 572 aa19.66■□□□□ 0.74
TSC2-222ENST00000568454 IQCEQ6IPM2 695 aa19.66■□□□□ 0.74
TSC2-222ENST00000568454 ZSCAN31Q96LW9 406 aaPredicted RBP19.66■□□□□ 0.74
TSC2-222ENST00000568454 C1orf115Q9H7X2 142 aa19.66■□□□□ 0.74
TSC2-222ENST00000568454 PTPRGP23470 1445 aa19.66■□□□□ 0.74
TSC2-222ENST00000568454 LARP1BQ659C4 914 aaKnown RBP19.66■□□□□ 0.74
TSC2-222ENST00000568454 ZRSR2Q15696 482 aaKnown RBP19.66■□□□□ 0.74
TSC2-222ENST00000568454 SKIDA1Q1XH10 827 aa19.66■□□□□ 0.74
TSC2-222ENST00000568454 ERICH3Q5RHP9 1530 aa19.66■□□□□ 0.74
TSC2-222ENST00000568454 CCDC181Q5TID7 509 aa19.66■□□□□ 0.74
TSC2-222ENST00000568454 ANKRD50Q9ULJ7 1429 aa19.66■□□□□ 0.74
TSC2-222ENST00000568454 TBC1D2BQ9UPU7 963 aa19.66■□□□□ 0.74
TSC2-222ENST00000568454 ZFYVE27Q5T4F4 411 aa19.66■□□□□ 0.74
TSC2-222ENST00000568454 ATF7IPQ6VMQ6 1270 aa19.65■□□□□ 0.74
TSC2-222ENST00000568454 UBXN4Q92575 508 aa19.65■□□□□ 0.74
TSC2-222ENST00000568454 SRCIN1Q9C0H9 1055 aa19.65■□□□□ 0.74
TSC2-222ENST00000568454 ATP2B1P20020 1258 aa19.65■□□□□ 0.74
TSC2-222ENST00000568454 LRRCC1Q9C099 1032 aa19.65■□□□□ 0.74
TSC2-222ENST00000568454 CCT4P50991 539 aaKnown RBP19.64■□□□□ 0.73
TSC2-222ENST00000568454 SPATA32Q96LK8 384 aa19.64■□□□□ 0.73
TSC2-222ENST00000568454 CFAP45Q9UL16 551 aa19.64■□□□□ 0.73
TSC2-222ENST00000568454 GAS2L2Q8NHY3 880 aa19.64■□□□□ 0.73
TSC2-222ENST00000568454 PDCL3Q9H2J4 239 aa19.64■□□□□ 0.73
TSC2-222ENST00000568454 PLCD4Q9BRC7 762 aa19.63■□□□□ 0.73
TSC2-222ENST00000568454 AIMP1Q12904 312 aaKnown RBP19.63■□□□□ 0.73
TSC2-222ENST00000568454 DNAJC2Q99543 621 aaKnown RBP19.63■□□□□ 0.73
TSC2-222ENST00000568454 PPP6R1Q9UPN7 881 aa19.63■□□□□ 0.73
TSC2-222ENST00000568454 STIM1Q13586 685 aa19.63■□□□□ 0.73
TSC2-222ENST00000568454 PRKAR2BP31323 418 aa19.62■□□□□ 0.73
TSC2-222ENST00000568454 TMCO3Q6UWJ1 677 aa19.62■□□□□ 0.73
TSC2-222ENST00000568454 GBP3Q9H0R5 595 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms