RNA–Protein interactions for RNA: ENST00000567954.5

LYRM1-208, Transcript of LYR motif containing 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene LYRM1, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LYRM1-208	ENST00000567954	CCDC144A	A2RUR9	1427 aa		11.88	□□□□□ -0.51
LYRM1-208	ENST00000567954	C11orf95	C9JLR9	678 aa	Predicted RBP	11.88	□□□□□ -0.51
LYRM1-208	ENST00000567954	TOMM70	O94826	608 aa		11.88	□□□□□ -0.51
LYRM1-208	ENST00000567954	PROM2	Q8N271	834 aa		11.88	□□□□□ -0.51
LYRM1-208	ENST00000567954	TNS2	Q63HR2	1409 aa		11.87	□□□□□ -0.51
LYRM1-208	ENST00000567954	RRBP1	Q9P2E9	1410 aa	Known RBP	11.87	□□□□□ -0.51
LYRM1-208	ENST00000567954	TNS3	Q68CZ2	1445 aa		11.86	□□□□□ -0.51
LYRM1-208	ENST00000567954	PSME1	Q06323	249 aa		11.86	□□□□□ -0.51
LYRM1-208	ENST00000567954	GCC2	Q8IWJ2	1684 aa		11.85	□□□□□ -0.51
LYRM1-208	ENST00000567954	HSPA1A	P0DMV8	641 aa	Known RBP	11.85	□□□□□ -0.51
LYRM1-208	ENST00000567954	HSPA1B	P0DMV9	641 aa	Known RBP	11.85	□□□□□ -0.51
LYRM1-208	ENST00000567954	HTRA3	P83110	453 aa		11.85	□□□□□ -0.51
LYRM1-208	ENST00000567954	KLHL34	Q8N239	644 aa		11.85	□□□□□ -0.51
LYRM1-208	ENST00000567954	ARHGEF10	O15013	1369 aa		11.84	□□□□□ -0.51
LYRM1-208	ENST00000567954	LMOD2	Q6P5Q4	547 aa		11.84	□□□□□ -0.51
LYRM1-208	ENST00000567954	BARGIN	Q6ZT62	677 aa		11.84	□□□□□ -0.51
LYRM1-208	ENST00000567954	NLGN2	Q8NFZ4	835 aa		11.84	□□□□□ -0.51
LYRM1-208	ENST00000567954	NRXN3	Q9Y4C0	1643 aa		11.84	□□□□□ -0.51
LYRM1-208	ENST00000567954	HFM1	A2PYH4	1435 aa		11.84	□□□□□ -0.51
LYRM1-208	ENST00000567954	CROCC2	H7BZ55	1655 aa		11.84	□□□□□ -0.51
LYRM1-208	ENST00000567954	NUTM2F	A1L443	756 aa		11.83	□□□□□ -0.52
LYRM1-208	ENST00000567954	MYO5B	Q9ULV0	1848 aa		11.83	□□□□□ -0.52
LYRM1-208	ENST00000567954	SBNO1	A3KN83	1393 aa		11.82	□□□□□ -0.52
LYRM1-208	ENST00000567954	NRAP	Q86VF7	1730 aa		11.82	□□□□□ -0.52
LYRM1-208	ENST00000567954	MYOM3	Q5VTT5	1437 aa		11.79	□□□□□ -0.52
LYRM1-208	ENST00000567954	PRAG1	Q86YV5	1406 aa		11.79	□□□□□ -0.52
LYRM1-208	ENST00000567954	POLD1	P28340	1107 aa		11.79	□□□□□ -0.52
LYRM1-208	ENST00000567954	MLLT1	Q03111	559 aa	Predicted RBP	11.79	□□□□□ -0.52
LYRM1-208	ENST00000567954	TXNRD1	Q16881	649 aa		11.79	□□□□□ -0.52
LYRM1-208	ENST00000567954	USP35	Q9P2H5	1018 aa		11.78	□□□□□ -0.52
LYRM1-208	ENST00000567954	DHX57	Q6P158	1386 aa	Known RBP	11.77	□□□□□ -0.53
LYRM1-208	ENST00000567954	CDC42BPG	Q6DT37	1551 aa		11.76	□□□□□ -0.53
LYRM1-208	ENST00000567954	ZNF326	Q5BKZ1	582 aa	Known RBP	11.76	□□□□□ -0.53
LYRM1-208	ENST00000567954	RBM46	Q8TBY0	533 aa	Known RBP	11.76	□□□□□ -0.53
LYRM1-208	ENST00000567954	PRDM11	Q9NQV5	511 aa		11.76	□□□□□ -0.53
LYRM1-208	ENST00000567954	STRN4	Q9NRL3	753 aa		11.76	□□□□□ -0.53
LYRM1-208	ENST00000567954	TECPR2	O15040	1411 aa		11.76	□□□□□ -0.53
LYRM1-208	ENST00000567954	PTF1A	Q7RTS3	328 aa		11.75	□□□□□ -0.53
LYRM1-208	ENST00000567954	RGS19	P49795	217 aa		11.74	□□□□□ -0.53
LYRM1-208	ENST00000567954	FSTL1	Q12841	308 aa		11.74	□□□□□ -0.53
LYRM1-208	ENST00000567954	TCP11L2	Q8N4U5	519 aa		11.74	□□□□□ -0.53
LYRM1-208	ENST00000567954	SLC16A10	Q8TF71	515 aa		11.74	□□□□□ -0.53
LYRM1-208	ENST00000567954	PHF8	Q9UPP1	1060 aa		11.74	□□□□□ -0.53
LYRM1-208	ENST00000567954	NAIP	Q13075	1403 aa		11.74	□□□□□ -0.53
LYRM1-208	ENST00000567954	COL14A1	Q05707	1796 aa	Known RBP	11.74	□□□□□ -0.53
LYRM1-208	ENST00000567954	OVOS2	A0A0G2JMS6	1433 aa		11.73	□□□□□ -0.53
LYRM1-208	ENST00000567954	OVOS2	A0A0J9YW53	1432 aa		11.73	□□□□□ -0.53
LYRM1-208	ENST00000567954	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.73	□□□□□ -0.53
LYRM1-208	ENST00000567954	USP19	O94966	1318 aa		11.73	□□□□□ -0.53
LYRM1-208	ENST00000567954	OVOS2	Q6IE36	1432 aa		11.73	□□□□□ -0.53
LYRM1-208	ENST00000567954	RGPD4	Q7Z3J3	1758 aa		11.73	□□□□□ -0.53
LYRM1-208	ENST00000567954	WDR90	Q96KV7	1748 aa		11.72	□□□□□ -0.53
LYRM1-208	ENST00000567954	ANKRD30A	Q9BXX3	1397 aa		11.71	□□□□□ -0.53
LYRM1-208	ENST00000567954	PMFBP1	Q8TBY8	1022 aa		11.71	□□□□□ -0.53
LYRM1-208	ENST00000567954	THRAP3	Q9Y2W1	955 aa	Known RBP	11.71	□□□□□ -0.53
LYRM1-208	ENST00000567954	EVA1C	P58658	441 aa		11.7	□□□□□ -0.54
LYRM1-208	ENST00000567954	PRDM10	Q9NQV6	1147 aa		11.7	□□□□□ -0.54
LYRM1-208	ENST00000567954	ABHD8	Q96I13	439 aa		11.68	□□□□□ -0.54
LYRM1-208	ENST00000567954	ABCA3	Q99758	1704 aa		11.67	□□□□□ -0.54
LYRM1-208	ENST00000567954	CHRNA2	Q15822	529 aa		11.67	□□□□□ -0.54
LYRM1-208	ENST00000567954	LARP1	Q6PKG0	1096 aa	Known RBP	11.67	□□□□□ -0.54
LYRM1-208	ENST00000567954	CHIC2	Q9UKJ5	165 aa		11.67	□□□□□ -0.54
LYRM1-208	ENST00000567954	KIF1A	Q12756	1690 aa		11.67	□□□□□ -0.54
LYRM1-208	ENST00000567954	IQGAP3	Q86VI3	1631 aa		11.67	□□□□□ -0.54
LYRM1-208	ENST00000567954	WAPL	Q7Z5K2	1190 aa		11.66	□□□□□ -0.54
LYRM1-208	ENST00000567954	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.66	□□□□□ -0.54
LYRM1-208	ENST00000567954	NMRK2	Q9NPI5	230 aa		11.66	□□□□□ -0.54
LYRM1-208	ENST00000567954	SSH2	Q76I76	1423 aa		11.66	□□□□□ -0.54
LYRM1-208	ENST00000567954	KIAA0232	Q92628	1395 aa		11.66	□□□□□ -0.54
LYRM1-208	ENST00000567954	ZNF827	Q17R98	1081 aa		11.65	□□□□□ -0.54
LYRM1-208	ENST00000567954	NRXN1	Q9ULB1	1477 aa		11.64	□□□□□ -0.55
LYRM1-208	ENST00000567954	BCL9	O00512	1426 aa		11.64	□□□□□ -0.55
LYRM1-208	ENST00000567954	VGF	O15240	615 aa	Predicted RBP	11.64	□□□□□ -0.55
LYRM1-208	ENST00000567954	DDB1	Q16531	1140 aa		11.63	□□□□□ -0.55
LYRM1-208	ENST00000567954	CD2AP	Q9Y5K6	639 aa		11.63	□□□□□ -0.55
LYRM1-208	ENST00000567954	ATP7B	P35670	1465 aa		11.63	□□□□□ -0.55
LYRM1-208	ENST00000567954	DAPK1	P53355	1430 aa		11.62	□□□□□ -0.55
LYRM1-208	ENST00000567954	TULP4	Q9NRJ4	1543 aa		11.62	□□□□□ -0.55
LYRM1-208	ENST00000567954	FOXN1	O15353	648 aa		11.61	□□□□□ -0.55
LYRM1-208	ENST00000567954	ZC3H6	P61129	1189 aa	Known RBP	11.6	□□□□□ -0.55
LYRM1-208	ENST00000567954	MARCH10	Q8NA82	808 aa	Predicted RBP	11.6	□□□□□ -0.55
LYRM1-208	ENST00000567954	AKT1S1	Q96B36	256 aa		11.6	□□□□□ -0.55
LYRM1-208	ENST00000567954	PEAK1	Q9H792	1746 aa		11.6	□□□□□ -0.55
LYRM1-208	ENST00000567954	ANKRD50	Q9ULJ7	1429 aa		11.6	□□□□□ -0.55
LYRM1-208	ENST00000567954	CTCF	P49711	727 aa	Predicted RBP	11.59	□□□□□ -0.55
LYRM1-208	ENST00000567954	PNPLA7	Q6ZV29	1317 aa		11.59	□□□□□ -0.55
LYRM1-208	ENST00000567954	CCDC85C	A6NKD9	419 aa		11.58	□□□□□ -0.56
LYRM1-208	ENST00000567954	SMC1B	Q8NDV3	1235 aa		11.58	□□□□□ -0.56
LYRM1-208	ENST00000567954	GPRASP1	Q5JY77	1395 aa		11.57	□□□□□ -0.56
LYRM1-208	ENST00000567954	PLEKHH1	Q9ULM0	1364 aa		11.57	□□□□□ -0.56
LYRM1-208	ENST00000567954	STK26	Q9P289	416 aa		11.57	□□□□□ -0.56
LYRM1-208	ENST00000567954	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.57	□□□□□ -0.56
LYRM1-208	ENST00000567954	LRRC4B	Q9NT99	713 aa		11.56	□□□□□ -0.56
LYRM1-208	ENST00000567954	TFCP2L1	Q9NZI6	479 aa		11.55	□□□□□ -0.56
LYRM1-208	ENST00000567954	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.55	□□□□□ -0.56
LYRM1-208	ENST00000567954	KIAA1210	Q9ULL0	1709 aa		11.55	□□□□□ -0.56
LYRM1-208	ENST00000567954	ABCC11	Q96J66	1382 aa		11.54	□□□□□ -0.56
LYRM1-208	ENST00000567954	ACIN1	Q9UKV3	1341 aa	Known RBP	11.54	□□□□□ -0.56
LYRM1-208	ENST00000567954	BRD4	O60885	1362 aa	Predicted RBP	11.54	□□□□□ -0.56
LYRM1-208	ENST00000567954	PAPPA	Q13219	1627 aa		11.53	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms