RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 ONECUT3O60422 494 aaPredicted RBP19.86■□□□□ 0.77
COMMD4-221ENST00000567935 VPS72Q15906 364 aa19.86■□□□□ 0.77
COMMD4-221ENST00000567935 ESCO1Q5FWF5 840 aa19.86■□□□□ 0.77
COMMD4-221ENST00000567935 IFFO2Q5TF58 517 aa19.86■□□□□ 0.77
COMMD4-221ENST00000567935 USP32Q8NFA0 1604 aa19.86■□□□□ 0.77
COMMD4-221ENST00000567935 FOXO3O43524 673 aa19.85■□□□□ 0.77
COMMD4-221ENST00000567935 MRS2Q9HD23 443 aa19.85■□□□□ 0.77
COMMD4-221ENST00000567935 TRAK1Q9UPV9 953 aa19.85■□□□□ 0.77
COMMD4-221ENST00000567935 PANK3Q9H999 370 aa19.84■□□□□ 0.77
COMMD4-221ENST00000567935 PARD3Q8TEW0 1356 aa19.83■□□□□ 0.77
COMMD4-221ENST00000567935 MYBBP1AQ9BQG0 1328 aaKnown RBP19.83■□□□□ 0.77
COMMD4-221ENST00000567935 MYOM1P52179 1685 aa19.83■□□□□ 0.76
COMMD4-221ENST00000567935 BRD4O60885 1362 aaPredicted RBP19.83■□□□□ 0.76
COMMD4-221ENST00000567935 NPC1L1Q9UHC9 1359 aa19.83■□□□□ 0.76
COMMD4-221ENST00000567935 DLC1Q96QB1 1528 aa19.82■□□□□ 0.76
COMMD4-221ENST00000567935 TMEM132EQ6IEE7 984 aa19.82■□□□□ 0.76
COMMD4-221ENST00000567935 CCDC9Q9Y3X0 531 aaKnown RBP19.82■□□□□ 0.76
COMMD4-221ENST00000567935 YTHDC2Q9H6S0 1430 aaKnown RBP19.82■□□□□ 0.76
COMMD4-221ENST00000567935 RGPD1P0DJD0 1748 aa19.81■□□□□ 0.76
COMMD4-221ENST00000567935 A0A0G2JS52 829 aa19.8■□□□□ 0.76
COMMD4-221ENST00000567935 MYT1Q01538 1121 aa19.8■□□□□ 0.76
COMMD4-221ENST00000567935 PLCH1Q4KWH8 1693 aa19.8■□□□□ 0.76
COMMD4-221ENST00000567935 EVC2Q86UK5 1308 aa19.79■□□□□ 0.76
COMMD4-221ENST00000567935 CDC42BPGQ6DT37 1551 aa19.78■□□□□ 0.76
COMMD4-221ENST00000567935 SPATA31A3Q5VYP0 1347 aa19.78■□□□□ 0.76
COMMD4-221ENST00000567935 DISP2A7MBM2 1401 aa19.78■□□□□ 0.76
COMMD4-221ENST00000567935 EZH2Q15910 746 aaKnown RBP19.78■□□□□ 0.76
COMMD4-221ENST00000567935 FAM182BQ5T319 152 aa19.78■□□□□ 0.76
COMMD4-221ENST00000567935 KNSTRNQ9Y448 316 aa19.78■□□□□ 0.76
COMMD4-221ENST00000567935 LRPPRCP42704 1394 aaKnown RBP19.78■□□□□ 0.76
COMMD4-221ENST00000567935 NLRP13Q86W25 1043 aa19.77■□□□□ 0.76
COMMD4-221ENST00000567935 NINLQ9Y2I6 1382 aa19.77■□□□□ 0.76
COMMD4-221ENST00000567935 TNS1Q9HBL0 1735 aaKnown RBP19.76■□□□□ 0.75
COMMD4-221ENST00000567935 NWD2Q9ULI1 1742 aa19.76■□□□□ 0.75
COMMD4-221ENST00000567935 ABCC11Q96J66 1382 aa19.75■□□□□ 0.75
COMMD4-221ENST00000567935 NUTM2FA1L443 756 aa19.75■□□□□ 0.75
COMMD4-221ENST00000567935 FAM98CQ17RN3 349 aaKnown RBP19.75■□□□□ 0.75
COMMD4-221ENST00000567935 SENP3-EIF4A1A0A087X0R7 540 aa19.74■□□□□ 0.75
COMMD4-221ENST00000567935 TMC1Q8TDI8 760 aa19.74■□□□□ 0.75
COMMD4-221ENST00000567935 CABLES1Q8TDN4 633 aa19.74■□□□□ 0.75
COMMD4-221ENST00000567935 CCDC184Q52MB2 194 aa19.73■□□□□ 0.75
COMMD4-221ENST00000567935 SIRT1Q96EB6 747 aa19.73■□□□□ 0.75
COMMD4-221ENST00000567935 KNDC1Q76NI1 1749 aa19.73■□□□□ 0.75
COMMD4-221ENST00000567935 TULP4Q9NRJ4 1543 aa19.72■□□□□ 0.75
COMMD4-221ENST00000567935 PLEKHG5O94827 1062 aa19.72■□□□□ 0.75
COMMD4-221ENST00000567935 HAP1P54257 671 aaPredicted RBP19.72■□□□□ 0.75
COMMD4-221ENST00000567935 AMER1Q5JTC6 1135 aaPredicted RBP19.71■□□□□ 0.75
COMMD4-221ENST00000567935 CAMKK2Q96RR4 588 aa19.71■□□□□ 0.75
COMMD4-221ENST00000567935 INSRP06213 1382 aa19.7■□□□□ 0.74
COMMD4-221ENST00000567935 TECPR2O15040 1411 aa19.7■□□□□ 0.74
COMMD4-221ENST00000567935 POGKQ9P215 609 aa19.7■□□□□ 0.74
COMMD4-221ENST00000567935 CAMTA1Q9Y6Y1 1673 aa19.69■□□□□ 0.74
COMMD4-221ENST00000567935 HNRNPUQ00839 825 aaKnown RBP eCLIP19.69■□□□□ 0.74
COMMD4-221ENST00000567935 ZNF784Q8NCA9 323 aaPredicted RBP19.69■□□□□ 0.74
COMMD4-221ENST00000567935 STK26Q9P289 416 aa19.69■□□□□ 0.74
COMMD4-221ENST00000567935 NRAPQ86VF7 1730 aa19.68■□□□□ 0.74
COMMD4-221ENST00000567935 ABCA3Q99758 1704 aa19.68■□□□□ 0.74
COMMD4-221ENST00000567935 PNISRQ8TF01 805 aaKnown RBP19.68■□□□□ 0.74
COMMD4-221ENST00000567935 FAM83GA6ND36 823 aa19.67■□□□□ 0.74
COMMD4-221ENST00000567935 KRT28Q7Z3Y7 464 aa19.67■□□□□ 0.74
COMMD4-221ENST00000567935 FAM9BQ8IZU0 186 aa19.67■□□□□ 0.74
COMMD4-221ENST00000567935 PRAM1Q96QH2 718 aa19.67■□□□□ 0.74
COMMD4-221ENST00000567935 TNS3Q68CZ2 1445 aa19.67■□□□□ 0.74
COMMD4-221ENST00000567935 ADGRB2O60241 1585 aa19.66■□□□□ 0.74
COMMD4-221ENST00000567935 DCAF8L1A6NGE4 600 aa19.66■□□□□ 0.74
COMMD4-221ENST00000567935 CC2D1BQ5T0F9 858 aaKnown RBP19.66■□□□□ 0.74
COMMD4-221ENST00000567935 PPP1R1BQ9UD71 204 aaPredicted RBP19.66■□□□□ 0.74
COMMD4-221ENST00000567935 GTF3C3Q9Y5Q9 886 aa19.65■□□□□ 0.74
COMMD4-221ENST00000567935 ANKRD36BQ8N2N9 1353 aa19.65■□□□□ 0.74
COMMD4-221ENST00000567935 ZBED9Q6R2W3 1325 aa19.64■□□□□ 0.73
COMMD4-221ENST00000567935 KIF1AQ12756 1690 aa19.64■□□□□ 0.73
COMMD4-221ENST00000567935 RREB1Q92766 1687 aa19.63■□□□□ 0.73
COMMD4-221ENST00000567935 THSD7AQ9UPZ6 1657 aa19.63■□□□□ 0.73
COMMD4-221ENST00000567935 NSD2O96028 1365 aa19.63■□□□□ 0.73
COMMD4-221ENST00000567935 TRIM37O94972 964 aa19.63■□□□□ 0.73
COMMD4-221ENST00000567935 CNGB1Q14028 1251 aaPredicted RBP19.63■□□□□ 0.73
COMMD4-221ENST00000567935 NUP188Q5SRE5 1749 aa19.62■□□□□ 0.73
COMMD4-221ENST00000567935 SPON1Q9HCB6 807 aa19.62■□□□□ 0.73
COMMD4-221ENST00000567935 C1QTNF8P60827 252 aa19.61■□□□□ 0.73
COMMD4-221ENST00000567935 BTG4Q9NY30 223 aa19.61■□□□□ 0.73
COMMD4-221ENST00000567935 FMN2Q9NZ56 1722 aa19.6■□□□□ 0.73
COMMD4-221ENST00000567935 APBA3O96018 575 aa19.6■□□□□ 0.73
COMMD4-221ENST00000567935 SRPK2P78362 688 aaKnown RBP19.6■□□□□ 0.73
COMMD4-221ENST00000567935 WAPLQ7Z5K2 1190 aa19.6■□□□□ 0.73
COMMD4-221ENST00000567935 CARD14Q9BXL6 1004 aa19.6■□□□□ 0.73
COMMD4-221ENST00000567935 NSD3Q9BZ95 1437 aa19.59■□□□□ 0.73
COMMD4-221ENST00000567935 KCNQ2O43526 872 aa19.59■□□□□ 0.73
COMMD4-221ENST00000567935 SLC12A5Q9H2X9 1139 aa19.59■□□□□ 0.73
COMMD4-221ENST00000567935 CGNL1Q0VF96 1302 aa19.58■□□□□ 0.73
COMMD4-221ENST00000567935 SPATA31A5Q5VU36 1347 aa19.58■□□□□ 0.73
COMMD4-221ENST00000567935 SPATA31A7Q8IWB4 1347 aa19.58■□□□□ 0.73
COMMD4-221ENST00000567935 MINK1Q8N4C8 1332 aaPredicted RBP19.58■□□□□ 0.73
COMMD4-221ENST00000567935 PPP2R1AP30153 589 aa19.58■□□□□ 0.72
COMMD4-221ENST00000567935 LMOD2Q6P5Q4 547 aa19.58■□□□□ 0.72
COMMD4-221ENST00000567935 TERF2IPQ9NYB0 399 aa19.58■□□□□ 0.72
COMMD4-221ENST00000567935 PLEKHH1Q9ULM0 1364 aa19.57■□□□□ 0.72
COMMD4-221ENST00000567935 SAFB2Q14151 953 aaKnown RBP eCLIP19.57■□□□□ 0.72
COMMD4-221ENST00000567935 CABP2Q9NPB3 220 aa19.57■□□□□ 0.72
COMMD4-221ENST00000567935 UTRNP46939 3433 aa19.56■□□□□ 0.72
COMMD4-221ENST00000567935 PSME1Q06323 249 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms