RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 GOLGA8CPA6NN73 597 aa8.48□□□□□ -1.05
SF3B3-210ENST00000567654 RNF40O75150 1001 aa8.48□□□□□ -1.05
SF3B3-210ENST00000567654 BRPF1P55201 1214 aaPredicted RBP8.48□□□□□ -1.05
SF3B3-210ENST00000567654 AMHR2Q16671 573 aa8.48□□□□□ -1.05
SF3B3-210ENST00000567654 TMEM134Q9H6X4 195 aa8.48□□□□□ -1.05
SF3B3-210ENST00000567654 ADGRL2O95490 1459 aa8.48□□□□□ -1.05
SF3B3-210ENST00000567654 MBD5Q9P267 1494 aa8.47□□□□□ -1.05
SF3B3-210ENST00000567654 WDR7Q9Y4E6 1490 aa8.47□□□□□ -1.05
SF3B3-210ENST00000567654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.47□□□□□ -1.05
SF3B3-210ENST00000567654 BCAMP50895 628 aa8.47□□□□□ -1.05
SF3B3-210ENST00000567654 LAPTM4BQ86VI4 370 aa8.47□□□□□ -1.05
SF3B3-210ENST00000567654 KCTD12Q96CX2 325 aaKnown RBP8.47□□□□□ -1.05
SF3B3-210ENST00000567654 RRP7BPQ9NSQ0 103 aa8.47□□□□□ -1.05
SF3B3-210ENST00000567654 CFDP1Q9UEE9 299 aaPredicted RBP8.47□□□□□ -1.05
SF3B3-210ENST00000567654 ABCC1P33527 1531 aa8.47□□□□□ -1.05
SF3B3-210ENST00000567654 MAST1Q9Y2H9 1570 aa8.47□□□□□ -1.05
SF3B3-210ENST00000567654 SHANK2Q9UPX8 1470 aa8.46□□□□□ -1.05
SF3B3-210ENST00000567654 ARHGEF12Q9NZN5 1544 aa8.46□□□□□ -1.05
SF3B3-210ENST00000567654 GIGYF2Q6Y7W6 1299 aaKnown RBP8.46□□□□□ -1.06
SF3B3-210ENST00000567654 SPNS2Q8IVW8 549 aa8.46□□□□□ -1.06
SF3B3-210ENST00000567654 WNT2BQ93097 391 aa8.46□□□□□ -1.06
SF3B3-210ENST00000567654 ZNF777Q9ULD5 760 aaPredicted RBP8.46□□□□□ -1.06
SF3B3-210ENST00000567654 TMUB1Q9BVT8 246 aa8.45□□□□□ -1.06
SF3B3-210ENST00000567654 GPCPD1Q9NPB8 672 aa8.45□□□□□ -1.06
SF3B3-210ENST00000567654 ROCK1Q13464 1354 aa8.45□□□□□ -1.06
SF3B3-210ENST00000567654 ASXL2Q76L83 1435 aa8.45□□□□□ -1.06
SF3B3-210ENST00000567654 DDX11L8A8MPP1 907 aa8.44□□□□□ -1.06
SF3B3-210ENST00000567654 MS4A1P11836 297 aa8.44□□□□□ -1.06
SF3B3-210ENST00000567654 MYT1LQ9UL68 1186 aa8.44□□□□□ -1.06
SF3B3-210ENST00000567654 CCDC141Q6ZP82 1450 aa8.44□□□□□ -1.06
SF3B3-210ENST00000567654 PLXNC1O60486 1568 aa8.44□□□□□ -1.06
SF3B3-210ENST00000567654 CLCN1P35523 988 aa8.43□□□□□ -1.06
SF3B3-210ENST00000567654 LRCH3Q96II8 777 aa8.43□□□□□ -1.06
SF3B3-210ENST00000567654 KDM4CQ9H3R0 1056 aa8.43□□□□□ -1.06
SF3B3-210ENST00000567654 DAXXQ9UER7 740 aaPredicted RBP8.43□□□□□ -1.06
SF3B3-210ENST00000567654 CLSPNQ9HAW4 1339 aa8.43□□□□□ -1.06
SF3B3-210ENST00000567654 PLCH2O75038 1416 aa8.43□□□□□ -1.06
SF3B3-210ENST00000567654 NCOA1Q15788 1441 aa8.43□□□□□ -1.06
SF3B3-210ENST00000567654 C9orf84Q5VXU9 1444 aa8.43□□□□□ -1.06
SF3B3-210ENST00000567654 ARAP3Q8WWN8 1544 aa8.43□□□□□ -1.06
SF3B3-210ENST00000567654 ANKK1Q8NFD2 765 aa8.42□□□□□ -1.06
SF3B3-210ENST00000567654 FAM217BQ9NTX9 383 aaPredicted RBP8.42□□□□□ -1.06
SF3B3-210ENST00000567654 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.42□□□□□ -1.06
SF3B3-210ENST00000567654 TSPOAP1O95153 1857 aa8.41□□□□□ -1.06
SF3B3-210ENST00000567654 PZPP20742 1482 aa8.41□□□□□ -1.06
SF3B3-210ENST00000567654 SLC10A3P09131 477 aa8.41□□□□□ -1.06
SF3B3-210ENST00000567654 SSTR3P32745 418 aaPredicted RBP8.41□□□□□ -1.06
SF3B3-210ENST00000567654 HDGFP51858 240 aaKnown RBP8.41□□□□□ -1.06
SF3B3-210ENST00000567654 HNRNPMP52272 730 aaKnown RBP eCLIP8.41□□□□□ -1.06
SF3B3-210ENST00000567654 MMRN1Q13201 1228 aa8.41□□□□□ -1.06
SF3B3-210ENST00000567654 RDH13Q8NBN7 331 aa8.41□□□□□ -1.06
SF3B3-210ENST00000567654 HPS5Q9UPZ3 1129 aa8.41□□□□□ -1.06
SF3B3-210ENST00000567654 KIF13AQ9H1H9 1805 aa8.4□□□□□ -1.06
SF3B3-210ENST00000567654 MAP3K4Q9Y6R4 1608 aa8.4□□□□□ -1.06
SF3B3-210ENST00000567654 UNC13BO14795 1591 aa8.4□□□□□ -1.06
SF3B3-210ENST00000567654 INO80Q9ULG1 1556 aaPredicted RBP8.4□□□□□ -1.06
SF3B3-210ENST00000567654 SOWAHBA6NEL2 793 aa8.4□□□□□ -1.06
SF3B3-210ENST00000567654 PTPN5P54829 565 aa8.4□□□□□ -1.06
SF3B3-210ENST00000567654 SIN3AQ96ST3 1273 aa8.4□□□□□ -1.06
SF3B3-210ENST00000567654 PPRC1Q5VV67 1664 aaKnown RBP8.4□□□□□ -1.07
SF3B3-210ENST00000567654 ZFYVE16Q7Z3T8 1539 aa8.39□□□□□ -1.07
SF3B3-210ENST00000567654 THSD4Q6ZMP0 1018 aa8.39□□□□□ -1.07
SF3B3-210ENST00000567654 FAM117AQ9C073 453 aa8.39□□□□□ -1.07
SF3B3-210ENST00000567654 KIDINS220Q9ULH0 1771 aa8.39□□□□□ -1.07
SF3B3-210ENST00000567654 KDM5DQ9BY66 1539 aa8.39□□□□□ -1.07
SF3B3-210ENST00000567654 TRAPPC8Q9Y2L5 1435 aa8.38□□□□□ -1.07
SF3B3-210ENST00000567654 WBP1LQ9NX94 342 aa8.38□□□□□ -1.07
SF3B3-210ENST00000567654 CFAP74Q9C0B2 1584 aa8.38□□□□□ -1.07
SF3B3-210ENST00000567654 FANCAO15360 1455 aa8.38□□□□□ -1.07
SF3B3-210ENST00000567654 PLEKHH2Q8IVE3 1493 aa8.38□□□□□ -1.07
SF3B3-210ENST00000567654 KIAA1107Q9UPP5 1409 aa8.37□□□□□ -1.07
SF3B3-210ENST00000567654 ANKRD30AQ9BXX3 1397 aa8.37□□□□□ -1.07
SF3B3-210ENST00000567654 DIP2BQ9P265 1576 aa8.37□□□□□ -1.07
SF3B3-210ENST00000567654 SLF2Q8IX21 1173 aa8.37□□□□□ -1.07
SF3B3-210ENST00000567654 RNF166Q96A37 237 aaPredicted RBP8.37□□□□□ -1.07
SF3B3-210ENST00000567654 RICTORQ6R327 1708 aa8.37□□□□□ -1.07
SF3B3-210ENST00000567654 ANKRD50Q9ULJ7 1429 aa8.37□□□□□ -1.07
SF3B3-210ENST00000567654 IQGAP3Q86VI3 1631 aa8.36□□□□□ -1.07
SF3B3-210ENST00000567654 CFHP08603 1231 aa8.36□□□□□ -1.07
SF3B3-210ENST00000567654 CD46P15529 392 aa8.36□□□□□ -1.07
SF3B3-210ENST00000567654 IL27Q8NEV9 243 aa8.36□□□□□ -1.07
SF3B3-210ENST00000567654 BEGAINQ9BUH8 593 aa8.36□□□□□ -1.07
SF3B3-210ENST00000567654 DEPDC5O75140 1603 aa8.36□□□□□ -1.07
SF3B3-210ENST00000567654 KIF15Q9NS87 1388 aa8.35□□□□□ -1.07
SF3B3-210ENST00000567654 ATP7AQ04656 1500 aa8.35□□□□□ -1.07
SF3B3-210ENST00000567654 PPP4CP60510 307 aa8.35□□□□□ -1.07
SF3B3-210ENST00000567654 SULF1Q8IWU6 871 aa8.35□□□□□ -1.07
SF3B3-210ENST00000567654 GLI2P10070 1586 aa8.35□□□□□ -1.07
SF3B3-210ENST00000567654 ADGRL1O94910 1474 aa8.34□□□□□ -1.07
SF3B3-210ENST00000567654 ABCA6Q8N139 1617 aa8.34□□□□□ -1.07
SF3B3-210ENST00000567654 APLP1P51693 650 aa8.34□□□□□ -1.07
SF3B3-210ENST00000567654 NEUROD1Q13562 356 aa8.34□□□□□ -1.07
SF3B3-210ENST00000567654 TRIM52Q96A61 297 aa8.34□□□□□ -1.07
SF3B3-210ENST00000567654 MPHOSPH9Q99550 1183 aa8.34□□□□□ -1.07
SF3B3-210ENST00000567654 TSR3Q9UJK0 312 aaKnown RBP8.34□□□□□ -1.07
SF3B3-210ENST00000567654 CEP152O94986 1710 aa8.34□□□□□ -1.07
SF3B3-210ENST00000567654 DUOX2Q9NRD8 1548 aa8.34□□□□□ -1.08
SF3B3-210ENST00000567654 MAGI2Q86UL8 1455 aa8.33□□□□□ -1.08
SF3B3-210ENST00000567654 PLEKHG3A1L390 1219 aa8.33□□□□□ -1.08
SF3B3-210ENST00000567654 KDM5CP41229 1560 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms