RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 E9PSI1 815 aa23.14■■□□□ 1.29
CMTM3-214ENST00000567572 MTHFSP49914 203 aa23.14■■□□□ 1.29
CMTM3-214ENST00000567572 GGNBP2Q9H3C7 697 aa23.13■■□□□ 1.29
CMTM3-214ENST00000567572 NUDT16Q96DE0 195 aaKnown RBP23.12■■□□□ 1.29
CMTM3-214ENST00000567572 MON2Q7Z3U7 1717 aa23.12■■□□□ 1.29
CMTM3-214ENST00000567572 TOPAZ1Q8N9V7 1692 aa23.12■■□□□ 1.29
CMTM3-214ENST00000567572 PLIN1O60240 522 aa23.11■■□□□ 1.29
CMTM3-214ENST00000567572 AKAP12Q02952 1782 aa23.11■■□□□ 1.29
CMTM3-214ENST00000567572 EDC4Q6P2E9 1401 aaKnown RBP23.11■■□□□ 1.29
CMTM3-214ENST00000567572 CCDC61Q9Y6R9 512 aa23.1■■□□□ 1.29
CMTM3-214ENST00000567572 CFAP53Q96M91 514 aa23.1■■□□□ 1.29
CMTM3-214ENST00000567572 AMOTL2Q9Y2J4 779 aa23.1■■□□□ 1.29
CMTM3-214ENST00000567572 ITSN1Q15811 1721 aa23.09■■□□□ 1.29
CMTM3-214ENST00000567572 PRR36Q9H6K5 1346 aa23.09■■□□□ 1.29
CMTM3-214ENST00000567572 NCBP3Q53F19 620 aaKnown RBP23.09■■□□□ 1.29
CMTM3-214ENST00000567572 CENPQQ7L2Z9 268 aaPredicted RBP23.08■■□□□ 1.29
CMTM3-214ENST00000567572 CCDC146Q8IYE0 955 aa23.08■■□□□ 1.29
CMTM3-214ENST00000567572 KDM2BQ8NHM5 1336 aa23.08■■□□□ 1.28
CMTM3-214ENST00000567572 PIK3R4Q99570 1358 aa23.07■■□□□ 1.28
CMTM3-214ENST00000567572 COL3A1P02461 1466 aaPredicted RBP23.07■■□□□ 1.28
CMTM3-214ENST00000567572 APAF1O14727 1248 aa23.07■■□□□ 1.28
CMTM3-214ENST00000567572 BACH2Q9BYV9 841 aa23.07■■□□□ 1.28
CMTM3-214ENST00000567572 SETD1BQ9UPS6 1966 aaKnown RBP23.07■■□□□ 1.28
CMTM3-214ENST00000567572 PDE4AP27815 886 aa23.06■■□□□ 1.28
CMTM3-214ENST00000567572 NCKAP5LQ9HCH0 1330 aa23.05■■□□□ 1.28
CMTM3-214ENST00000567572 IQSEC2Q5JU85 1478 aa23.04■■□□□ 1.28
CMTM3-214ENST00000567572 NRKQ7Z2Y5 1582 aa23.02■■□□□ 1.28
CMTM3-214ENST00000567572 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.02■■□□□ 1.28
CMTM3-214ENST00000567572 C20orf194Q5TEA3 1177 aa23.02■■□□□ 1.28
CMTM3-214ENST00000567572 ANKLE2Q86XL3 938 aa23.02■■□□□ 1.28
CMTM3-214ENST00000567572 ZBTB47Q9UFB7 747 aaPredicted RBP23.01■■□□□ 1.27
CMTM3-214ENST00000567572 PNPLA6Q8IY17 1366 aa23.01■■□□□ 1.27
CMTM3-214ENST00000567572 RUNDC1Q96C34 613 aa22.99■■□□□ 1.27
CMTM3-214ENST00000567572 ZNF692Q9BU19 519 aaPredicted RBP22.99■■□□□ 1.27
CMTM3-214ENST00000567572 PLEKHG3A1L390 1219 aa22.98■■□□□ 1.27
CMTM3-214ENST00000567572 CHD2O14647 1828 aaKnown RBP22.98■■□□□ 1.27
CMTM3-214ENST00000567572 CCDC27Q2M243 656 aa22.98■■□□□ 1.27
CMTM3-214ENST00000567572 PHF23Q9BUL5 403 aaPredicted RBP22.98■■□□□ 1.27
CMTM3-214ENST00000567572 PDE3AQ14432 1141 aa22.97■■□□□ 1.27
CMTM3-214ENST00000567572 WWC1Q8IX03 1113 aa22.97■■□□□ 1.27
CMTM3-214ENST00000567572 KCNA6P17658 529 aa22.96■■□□□ 1.27
CMTM3-214ENST00000567572 NME9Q86XW9 330 aa22.96■■□□□ 1.27
CMTM3-214ENST00000567572 SPINK5Q9NQ38 1064 aaPredicted RBP22.95■■□□□ 1.26
CMTM3-214ENST00000567572 AAMPQ13685 434 aa22.94■■□□□ 1.26
CMTM3-214ENST00000567572 WDR63Q8IWG1 891 aa22.94■■□□□ 1.26
CMTM3-214ENST00000567572 PAK3O75914 559 aaPredicted RBP22.94■■□□□ 1.26
CMTM3-214ENST00000567572 USP6P35125 1406 aa22.93■■□□□ 1.26
CMTM3-214ENST00000567572 AATKQ6ZMQ8 1374 aa22.93■■□□□ 1.26
CMTM3-214ENST00000567572 ACEP12821 1306 aa22.93■■□□□ 1.26
CMTM3-214ENST00000567572 MAP2P11137 1827 aaKnown RBP22.92■■□□□ 1.26
CMTM3-214ENST00000567572 U2AF1L5P0DN76 240 aaPredicted RBP22.92■■□□□ 1.26
CMTM3-214ENST00000567572 U2AF1Q01081 240 aaKnown RBP eCLIP22.92■■□□□ 1.26
CMTM3-214ENST00000567572 POLKQ9UBT6 870 aa22.92■■□□□ 1.26
CMTM3-214ENST00000567572 FMN2Q9NZ56 1722 aa22.92■■□□□ 1.26
CMTM3-214ENST00000567572 ANKARQ7Z5J8 1434 aa22.92■■□□□ 1.26
CMTM3-214ENST00000567572 TCP11L2Q8N4U5 519 aa22.91■■□□□ 1.26
CMTM3-214ENST00000567572 NPHP4O75161 1426 aaPredicted RBP22.9■■□□□ 1.26
CMTM3-214ENST00000567572 SSH2Q76I76 1423 aa22.9■■□□□ 1.26
CMTM3-214ENST00000567572 NUTM2FA1L443 756 aa22.9■■□□□ 1.26
CMTM3-214ENST00000567572 RGPD8O14715 1765 aaPredicted RBP22.9■■□□□ 1.26
CMTM3-214ENST00000567572 CDK12Q9NYV4 1490 aaPredicted RBP22.9■■□□□ 1.26
CMTM3-214ENST00000567572 DDRGK1Q96HY6 314 aa22.9■■□□□ 1.26
CMTM3-214ENST00000567572 COG3Q96JB2 828 aa22.9■■□□□ 1.26
CMTM3-214ENST00000567572 ZRANB1Q9UGI0 708 aa22.9■■□□□ 1.26
CMTM3-214ENST00000567572 NALCNQ8IZF0 1738 aa22.9■■□□□ 1.26
CMTM3-214ENST00000567572 TTC21BQ7Z4L5 1316 aa22.89■■□□□ 1.26
CMTM3-214ENST00000567572 DIAPH1O60610 1272 aaKnown RBP22.89■■□□□ 1.25
CMTM3-214ENST00000567572 OVOS2A0A0J9YW53 1432 aa22.88■■□□□ 1.25
CMTM3-214ENST00000567572 OVOS2Q6IE36 1432 aa22.88■■□□□ 1.25
CMTM3-214ENST00000567572 DMRT2Q9Y5R5 561 aa22.87■■□□□ 1.25
CMTM3-214ENST00000567572 U2SURPO15042 1029 aaKnown RBP22.86■■□□□ 1.25
CMTM3-214ENST00000567572 FBLN1P23142 703 aa22.86■■□□□ 1.25
CMTM3-214ENST00000567572 PLEKHF1Q96S99 279 aa22.86■■□□□ 1.25
CMTM3-214ENST00000567572 BCAR3O75815 825 aa22.85■■□□□ 1.25
CMTM3-214ENST00000567572 FAM161AQ3B820 660 aa22.84■■□□□ 1.25
CMTM3-214ENST00000567572 RRP7AQ9Y3A4 280 aaKnown RBP22.84■■□□□ 1.25
CMTM3-214ENST00000567572 EMILIN1Q9Y6C2 1016 aa22.84■■□□□ 1.25
CMTM3-214ENST00000567572 LRRC7Q96NW7 1537 aa22.83■■□□□ 1.25
CMTM3-214ENST00000567572 CT47B1P0C2W7 299 aaPredicted RBP22.83■■□□□ 1.25
CMTM3-214ENST00000567572 MYH16Q9H6N6 1097 aa22.83■■□□□ 1.25
CMTM3-214ENST00000567572 NWD1Q149M9 1564 aa22.83■■□□□ 1.25
CMTM3-214ENST00000567572 TTC21AQ8NDW8 1320 aa22.82■■□□□ 1.24
CMTM3-214ENST00000567572 PPM1GO15355 546 aaPredicted RBP22.81■■□□□ 1.24
CMTM3-214ENST00000567572 NEUROD2Q15784 382 aa22.81■■□□□ 1.24
CMTM3-214ENST00000567572 NPM2Q86SE8 214 aaKnown RBP22.81■■□□□ 1.24
CMTM3-214ENST00000567572 PMFBP1Q8TBY8 1022 aa22.81■■□□□ 1.24
CMTM3-214ENST00000567572 USP31Q70CQ4 1352 aa22.8■■□□□ 1.24
CMTM3-214ENST00000567572 ADGRL3Q9HAR2 1447 aa22.8■■□□□ 1.24
CMTM3-214ENST00000567572 RARSP54136 660 aaKnown RBP22.8■■□□□ 1.24
CMTM3-214ENST00000567572 CLUAP1Q96AJ1 413 aa22.8■■□□□ 1.24
CMTM3-214ENST00000567572 CANXP27824 592 aaKnown RBP22.79■■□□□ 1.24
CMTM3-214ENST00000567572 FCHSD2O94868 740 aa22.78■■□□□ 1.24
CMTM3-214ENST00000567572 PNNQ9H307 717 aaKnown RBP22.78■■□□□ 1.24
CMTM3-214ENST00000567572 PIK3C2AO00443 1686 aa22.78■■□□□ 1.24
CMTM3-214ENST00000567572 IL13P35225 146 aa22.78■■□□□ 1.24
CMTM3-214ENST00000567572 NGDNQ8NEJ9 315 aaKnown RBP22.78■■□□□ 1.24
CMTM3-214ENST00000567572 MAPK8IP3Q9UPT6 1336 aa22.77■■□□□ 1.24
CMTM3-214ENST00000567572 RRS1Q15050 365 aaKnown RBP22.77■■□□□ 1.24
CMTM3-214ENST00000567572 TMPOP42166 694 aaKnown RBP22.76■■□□□ 1.23
CMTM3-214ENST00000567572 RSPH6AQ9H0K4 717 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms