RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 ARHGEF10O15013 1369 aa28.23■■■□□ 2.11
RNF40-210ENST00000566811 TERF2IPQ9NYB0 399 aa28.22■■■□□ 2.11
RNF40-210ENST00000566811 ZNF772Q68DY9 489 aaPredicted RBP28.21■■■□□ 2.11
RNF40-210ENST00000566811 DDX17Q92841 729 aaKnown RBP28.21■■■□□ 2.11
RNF40-210ENST00000566811 CD163L1Q9NR16 1453 aa28.21■■■□□ 2.11
RNF40-210ENST00000566811 HDGFL2Q7Z4V5 671 aaPredicted RBP28.2■■■□□ 2.1
RNF40-210ENST00000566811 ANKRD36BQ8N2N9 1353 aa28.2■■■□□ 2.1
RNF40-210ENST00000566811 TMC1Q8TDI8 760 aa28.19■■■□□ 2.1
RNF40-210ENST00000566811 SPATA31A3Q5VYP0 1347 aa28.18■■■□□ 2.1
RNF40-210ENST00000566811 PNPLA6Q8IY17 1366 aa28.18■■■□□ 2.1
RNF40-210ENST00000566811 KTN1Q86UP2 1357 aaKnown RBP28.17■■■□□ 2.1
RNF40-210ENST00000566811 UPF1Q92900 1129 aaKnown RBP eCLIP28.16■■■□□ 2.1
RNF40-210ENST00000566811 EDC4Q6P2E9 1401 aaKnown RBP28.16■■■□□ 2.1
RNF40-210ENST00000566811 SSH2Q76I76 1423 aa28.16■■■□□ 2.1
RNF40-210ENST00000566811 ABCA3Q99758 1704 aa28.15■■■□□ 2.1
RNF40-210ENST00000566811 A0A1W2PP64 1363 aa28.15■■■□□ 2.1
RNF40-210ENST00000566811 USP54Q70EL1 1684 aa28.15■■■□□ 2.1
RNF40-210ENST00000566811 NUTM2BA6NNL0 878 aaPredicted RBP28.14■■■□□ 2.1
RNF40-210ENST00000566811 NUTM2EB1AL46 878 aaPredicted RBP28.14■■■□□ 2.1
RNF40-210ENST00000566811 XPCQ01831 940 aaPredicted RBP28.14■■■□□ 2.1
RNF40-210ENST00000566811 NUTM2AQ8IVF1 878 aaPredicted RBP28.14■■■□□ 2.1
RNF40-210ENST00000566811 TTC21AQ8NDW8 1320 aa28.14■■■□□ 2.09
RNF40-210ENST00000566811 CRYBG1Q9Y4K1 1723 aa28.13■■■□□ 2.09
RNF40-210ENST00000566811 SLC12A5Q9H2X9 1139 aa28.13■■■□□ 2.09
RNF40-210ENST00000566811 PIK3C2AO00443 1686 aa28.13■■■□□ 2.09
RNF40-210ENST00000566811 KIF7Q2M1P5 1343 aa28.11■■■□□ 2.09
RNF40-210ENST00000566811 MARF1Q9Y4F3 1742 aaKnown RBP28.1■■■□□ 2.09
RNF40-210ENST00000566811 CCDC7Q96M83 1385 aa28.1■■■□□ 2.09
RNF40-210ENST00000566811 RXRBP28702 533 aa28.09■■■□□ 2.09
RNF40-210ENST00000566811 PHRF1Q9P1Y6 1649 aaKnown RBP28.09■■■□□ 2.09
RNF40-210ENST00000566811 KIF20BQ96Q89 1820 aa28.08■■■□□ 2.09
RNF40-210ENST00000566811 PAK3O75914 559 aaPredicted RBP28.08■■■□□ 2.09
RNF40-210ENST00000566811 C11orf95C9JLR9 678 aaPredicted RBP28.05■■■□□ 2.08
RNF40-210ENST00000566811 AFF2P51816 1311 aa28.05■■■□□ 2.08
RNF40-210ENST00000566811 TTC21BQ7Z4L5 1316 aa28.05■■■□□ 2.08
RNF40-210ENST00000566811 POLR3GLQ9BT43 218 aa28.05■■■□□ 2.08
RNF40-210ENST00000566811 WASHC2AQ641Q2 1341 aa28.02■■■□□ 2.08
RNF40-210ENST00000566811 LMOD2Q6P5Q4 547 aa28.02■■■□□ 2.08
RNF40-210ENST00000566811 ABTB2Q8N961 1025 aa28.02■■■□□ 2.08
RNF40-210ENST00000566811 SLIT3O75094 1523 aa28.01■■■□□ 2.07
RNF40-210ENST00000566811 NLRP13Q86W25 1043 aa28■■■□□ 2.07
RNF40-210ENST00000566811 ANKRD26Q9UPS8 1709 aa28■■■□□ 2.07
RNF40-210ENST00000566811 CDK12Q9NYV4 1490 aaPredicted RBP28■■■□□ 2.07
RNF40-210ENST00000566811 USP31Q70CQ4 1352 aa27.99■■■□□ 2.07
RNF40-210ENST00000566811 USP19O94966 1318 aa27.98■■■□□ 2.07
RNF40-210ENST00000566811 NSD3Q9BZ95 1437 aa27.98■■■□□ 2.07
RNF40-210ENST00000566811 OVOS2A0A0J9YW53 1432 aa27.95■■■□□ 2.07
RNF40-210ENST00000566811 OVOS2Q6IE36 1432 aa27.95■■■□□ 2.07
RNF40-210ENST00000566811 HAP1P54257 671 aaPredicted RBP27.94■■■□□ 2.06
RNF40-210ENST00000566811 C8orf37Q96NL8 207 aa27.94■■■□□ 2.06
RNF40-210ENST00000566811 CGNL1Q0VF96 1302 aa27.93■■■□□ 2.06
RNF40-210ENST00000566811 NLRP6P59044 892 aa27.93■■■□□ 2.06
RNF40-210ENST00000566811 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.93■■■□□ 2.06
RNF40-210ENST00000566811 QTRT2Q9H974 415 aaKnown RBP27.93■■■□□ 2.06
RNF40-210ENST00000566811 NSD2O96028 1365 aa27.93■■■□□ 2.06
RNF40-210ENST00000566811 NWD2Q9ULI1 1742 aa27.92■■■□□ 2.06
RNF40-210ENST00000566811 COL14A1Q05707 1796 aaKnown RBP27.91■■■□□ 2.06
RNF40-210ENST00000566811 PANK3Q9H999 370 aa27.91■■■□□ 2.06
RNF40-210ENST00000566811 RBM6P78332 1123 aaKnown RBP27.9■■■□□ 2.06
RNF40-210ENST00000566811 KCNH5Q8NCM2 988 aa27.9■■■□□ 2.06
RNF40-210ENST00000566811 ABCC6O95255 1503 aa27.9■■■□□ 2.06
RNF40-210ENST00000566811 RGS12O14924 1447 aa27.9■■■□□ 2.06
RNF40-210ENST00000566811 CARD14Q9BXL6 1004 aa27.89■■■□□ 2.06
RNF40-210ENST00000566811 NFAT5O94916 1531 aa27.88■■■□□ 2.05
RNF40-210ENST00000566811 PLCH1Q4KWH8 1693 aa27.88■■■□□ 2.05
RNF40-210ENST00000566811 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.88■■■□□ 2.05
RNF40-210ENST00000566811 CPDO75976 1380 aa27.87■■■□□ 2.05
RNF40-210ENST00000566811 NME9Q86XW9 330 aa27.87■■■□□ 2.05
RNF40-210ENST00000566811 COG3Q96JB2 828 aa27.86■■■□□ 2.05
RNF40-210ENST00000566811 KNSTRNQ9Y448 316 aa27.86■■■□□ 2.05
RNF40-210ENST00000566811 ADAMTS2O95450 1211 aa27.85■■■□□ 2.05
RNF40-210ENST00000566811 NUTM2GQ5VZR2 741 aa27.85■■■□□ 2.05
RNF40-210ENST00000566811 LTN1O94822 1766 aa27.85■■■□□ 2.05
RNF40-210ENST00000566811 GCP02774 474 aa27.84■■■□□ 2.05
RNF40-210ENST00000566811 CABLES1Q8TDN4 633 aa27.84■■■□□ 2.05
RNF40-210ENST00000566811 NGLY1Q96IV0 654 aa27.84■■■□□ 2.05
RNF40-210ENST00000566811 FYB1O15117 783 aa27.83■■■□□ 2.05
RNF40-210ENST00000566811 NPC1L1Q9UHC9 1359 aa27.82■■■□□ 2.04
RNF40-210ENST00000566811 LMO7Q8WWI1 1683 aa27.81■■■□□ 2.04
RNF40-210ENST00000566811 SLIT2O94813 1529 aa27.79■■■□□ 2.04
RNF40-210ENST00000566811 KIAA0232Q92628 1395 aa27.79■■■□□ 2.04
RNF40-210ENST00000566811 NRAPQ86VF7 1730 aa27.78■■■□□ 2.04
RNF40-210ENST00000566811 ZNF316A6NFI3 1004 aaPredicted RBP27.77■■■□□ 2.04
RNF40-210ENST00000566811 PER1O15534 1290 aaPredicted RBP27.77■■■□□ 2.04
RNF40-210ENST00000566811 PRDM11Q9NQV5 511 aa27.77■■■□□ 2.04
RNF40-210ENST00000566811 GGNBP2Q9H3C7 697 aa27.76■■■□□ 2.03
RNF40-210ENST00000566811 COL18A1P39060 1754 aa27.76■■■□□ 2.03
RNF40-210ENST00000566811 FNBP4Q8N3X1 1017 aaPredicted RBP27.75■■■□□ 2.03
RNF40-210ENST00000566811 USP21Q9UK80 565 aa27.75■■■□□ 2.03
RNF40-210ENST00000566811 AATKQ6ZMQ8 1374 aa27.74■■■□□ 2.03
RNF40-210ENST00000566811 PLEKHG5O94827 1062 aa27.74■■■□□ 2.03
RNF40-210ENST00000566811 ZRANB1Q9UGI0 708 aa27.74■■■□□ 2.03
RNF40-210ENST00000566811 KIF24Q5T7B8 1368 aa27.73■■■□□ 2.03
RNF40-210ENST00000566811 AMER1Q5JTC6 1135 aaPredicted RBP27.73■■■□□ 2.03
RNF40-210ENST00000566811 RTL1A6NKG5 1358 aa27.73■■■□□ 2.03
RNF40-210ENST00000566811 MAP2P11137 1827 aaKnown RBP27.72■■■□□ 2.03
RNF40-210ENST00000566811 ZC3H6P61129 1189 aaKnown RBP27.72■■■□□ 2.03
RNF40-210ENST00000566811 FAM208AQ9UK61 1670 aaKnown RBP27.72■■■□□ 2.03
RNF40-210ENST00000566811 ARHGEF25Q86VW2 580 aa27.71■■■□□ 2.03
RNF40-210ENST00000566811 TRPC5Q9UL62 973 aaPredicted RBP27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms