RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 NUDT16Q96DE0 195 aaKnown RBP10.06□□□□□ -0.8
MAP1LC3B-205ENST00000564638 CABP2Q9NPB3 220 aa10.06□□□□□ -0.8
MAP1LC3B-205ENST00000564638 PHF8Q9UPP1 1060 aa10.06□□□□□ -0.8
MAP1LC3B-205ENST00000564638 MYBBP1AQ9BQG0 1328 aaKnown RBP10.06□□□□□ -0.8
MAP1LC3B-205ENST00000564638 ATP7BP35670 1465 aa10.05□□□□□ -0.8
MAP1LC3B-205ENST00000564638 CCDC184Q52MB2 194 aa10.05□□□□□ -0.8
MAP1LC3B-205ENST00000564638 MEX3CQ5U5Q3 659 aaKnown RBP10.05□□□□□ -0.8
MAP1LC3B-205ENST00000564638 ZRANB1Q9UGI0 708 aa10.05□□□□□ -0.8
MAP1LC3B-205ENST00000564638 NPHP3Q7Z494 1330 aa10.05□□□□□ -0.8
MAP1LC3B-205ENST00000564638 BRD4O60885 1362 aaPredicted RBP10.04□□□□□ -0.8
MAP1LC3B-205ENST00000564638 PARD3Q8TEW0 1356 aa10.04□□□□□ -0.8
MAP1LC3B-205ENST00000564638 SBNO2Q9Y2G9 1366 aa10.04□□□□□ -0.8
MAP1LC3B-205ENST00000564638 TOPAZ1Q8N9V7 1692 aa10.04□□□□□ -0.8
MAP1LC3B-205ENST00000564638 FAM9BQ8IZU0 186 aa10.04□□□□□ -0.8
MAP1LC3B-205ENST00000564638 NGDNQ8NEJ9 315 aaKnown RBP10.04□□□□□ -0.8
MAP1LC3B-205ENST00000564638 NEFLP07196 543 aa10.03□□□□□ -0.8
MAP1LC3B-205ENST00000564638 RBM6P78332 1123 aaKnown RBP10.03□□□□□ -0.8
MAP1LC3B-205ENST00000564638 PSME1Q06323 249 aa10.03□□□□□ -0.8
MAP1LC3B-205ENST00000564638 QTRT2Q9H974 415 aaKnown RBP10.03□□□□□ -0.8
MAP1LC3B-205ENST00000564638 ZBED9Q6R2W3 1325 aa10.03□□□□□ -0.8
MAP1LC3B-205ENST00000564638 PPIP5K1Q6PFW1 1433 aa10.02□□□□□ -0.81
MAP1LC3B-205ENST00000564638 NUTM2BA6NNL0 878 aaPredicted RBP10.02□□□□□ -0.81
MAP1LC3B-205ENST00000564638 NUTM2EB1AL46 878 aaPredicted RBP10.02□□□□□ -0.81
MAP1LC3B-205ENST00000564638 CNGB1Q14028 1251 aaPredicted RBP10.02□□□□□ -0.81
MAP1LC3B-205ENST00000564638 LMOD2Q6P5Q4 547 aa10.02□□□□□ -0.81
MAP1LC3B-205ENST00000564638 KRT28Q7Z3Y7 464 aa10.02□□□□□ -0.81
MAP1LC3B-205ENST00000564638 NUTM2AQ8IVF1 878 aaPredicted RBP10.02□□□□□ -0.81
MAP1LC3B-205ENST00000564638 CCDC61Q9Y6R9 512 aa10.02□□□□□ -0.81
MAP1LC3B-205ENST00000564638 PXDNQ92626 1479 aa10.02□□□□□ -0.81
MAP1LC3B-205ENST00000564638 LRP5O75197 1615 aa10.01□□□□□ -0.81
MAP1LC3B-205ENST00000564638 PLEKHG5O94827 1062 aa10.01□□□□□ -0.81
MAP1LC3B-205ENST00000564638 TMC1Q8TDI8 760 aa10.01□□□□□ -0.81
MAP1LC3B-205ENST00000564638 LRRC59Q96AG4 307 aaKnown RBP10.01□□□□□ -0.81
MAP1LC3B-205ENST00000564638 SOS2Q07890 1332 aaPredicted RBP10.01□□□□□ -0.81
MAP1LC3B-205ENST00000564638 ATAD2Q6PL18 1390 aa10.01□□□□□ -0.81
MAP1LC3B-205ENST00000564638 PAK3O75914 559 aaPredicted RBP10□□□□□ -0.81
MAP1LC3B-205ENST00000564638 NLRP13Q86W25 1043 aa10□□□□□ -0.81
MAP1LC3B-205ENST00000564638 PANK3Q9H999 370 aa10□□□□□ -0.81
MAP1LC3B-205ENST00000564638 CABP1Q9NZU7 370 aa10□□□□□ -0.81
MAP1LC3B-205ENST00000564638 ACEP12821 1306 aa10□□□□□ -0.81
MAP1LC3B-205ENST00000564638 UTRNP46939 3433 aa9.99□□□□□ -0.81
MAP1LC3B-205ENST00000564638 PER1O15534 1290 aaPredicted RBP9.99□□□□□ -0.81
MAP1LC3B-205ENST00000564638 NPM3O75607 178 aaKnown RBP9.99□□□□□ -0.81
MAP1LC3B-205ENST00000564638 SUPT16HQ9Y5B9 1047 aaKnown RBP9.99□□□□□ -0.81
MAP1LC3B-205ENST00000564638 CEP350Q5VT06 3117 aa9.99□□□□□ -0.81
MAP1LC3B-205ENST00000564638 PNPLA6Q8IY17 1366 aa9.99□□□□□ -0.81
MAP1LC3B-205ENST00000564638 PLEKHG3A1L390 1219 aa9.98□□□□□ -0.81
MAP1LC3B-205ENST00000564638 PELP1Q8IZL8 1130 aaKnown RBP9.98□□□□□ -0.81
MAP1LC3B-205ENST00000564638 CNKSR2Q8WXI2 1034 aa9.98□□□□□ -0.81
MAP1LC3B-205ENST00000564638 KNSTRNQ9Y448 316 aa9.98□□□□□ -0.81
MAP1LC3B-205ENST00000564638 TRPM3Q9HCF6 1732 aaPredicted RBP9.98□□□□□ -0.81
MAP1LC3B-205ENST00000564638 TNS3Q68CZ2 1445 aa9.98□□□□□ -0.81
MAP1LC3B-205ENST00000564638 AKAP12Q02952 1782 aa9.97□□□□□ -0.81
MAP1LC3B-205ENST00000564638 SPATA31A3Q5VYP0 1347 aa9.97□□□□□ -0.81
MAP1LC3B-205ENST00000564638 SBNO1A3KN83 1393 aa9.97□□□□□ -0.81
MAP1LC3B-205ENST00000564638 POLR3AO14802 1390 aaPredicted RBP9.97□□□□□ -0.81
MAP1LC3B-205ENST00000564638 NPC1L1Q9UHC9 1359 aa9.97□□□□□ -0.81
MAP1LC3B-205ENST00000564638 HAP1P54257 671 aaPredicted RBP9.96□□□□□ -0.82
MAP1LC3B-205ENST00000564638 MAPK8IP2Q13387 824 aaPredicted RBP9.96□□□□□ -0.82
MAP1LC3B-205ENST00000564638 CC2D1BQ5T0F9 858 aaKnown RBP9.96□□□□□ -0.82
MAP1LC3B-205ENST00000564638 PNISRQ8TF01 805 aaKnown RBP9.96□□□□□ -0.82
MAP1LC3B-205ENST00000564638 C8orf37Q96NL8 207 aa9.96□□□□□ -0.82
MAP1LC3B-205ENST00000564638 SLC12A5Q9H2X9 1139 aa9.96□□□□□ -0.82
MAP1LC3B-205ENST00000564638 INSRP06213 1382 aa9.96□□□□□ -0.82
MAP1LC3B-205ENST00000564638 ALS2Q96Q42 1657 aa9.96□□□□□ -0.82
MAP1LC3B-205ENST00000564638 NUTM2GQ5VZR2 741 aa9.95□□□□□ -0.82
MAP1LC3B-205ENST00000564638 HDGFL2Q7Z4V5 671 aaPredicted RBP9.95□□□□□ -0.82
MAP1LC3B-205ENST00000564638 ARHGEF10O15013 1369 aa9.95□□□□□ -0.82
MAP1LC3B-205ENST00000564638 BCL9LQ86UU0 1499 aa9.95□□□□□ -0.82
MAP1LC3B-205ENST00000564638 COL22A1Q8NFW1 1626 aaPredicted RBP9.94□□□□□ -0.82
MAP1LC3B-205ENST00000564638 USP6P35125 1406 aa9.94□□□□□ -0.82
MAP1LC3B-205ENST00000564638 ADAMTS2O95450 1211 aa9.94□□□□□ -0.82
MAP1LC3B-205ENST00000564638 FKBP8Q14318 412 aa9.94□□□□□ -0.82
MAP1LC3B-205ENST00000564638 CABLES1Q8TDN4 633 aa9.94□□□□□ -0.82
MAP1LC3B-205ENST00000564638 PUS7Q96PZ0 661 aaKnown RBP9.94□□□□□ -0.82
MAP1LC3B-205ENST00000564638 MON2Q7Z3U7 1717 aa9.93□□□□□ -0.82
MAP1LC3B-205ENST00000564638 SMG6Q86US8 1419 aaKnown RBP9.93□□□□□ -0.82
MAP1LC3B-205ENST00000564638 DEFB132Q7Z7B7 95 aa9.93□□□□□ -0.82
MAP1LC3B-205ENST00000564638 ABTB2Q8N961 1025 aa9.93□□□□□ -0.82
MAP1LC3B-205ENST00000564638 ZNF692Q9BU19 519 aaPredicted RBP9.93□□□□□ -0.82
MAP1LC3B-205ENST00000564638 TERF2IPQ9NYB0 399 aa9.93□□□□□ -0.82
MAP1LC3B-205ENST00000564638 ABCA3Q99758 1704 aa9.93□□□□□ -0.82
MAP1LC3B-205ENST00000564638 ATRNO75882 1429 aa9.92□□□□□ -0.82
MAP1LC3B-205ENST00000564638 BLMP54132 1417 aaPredicted RBP9.92□□□□□ -0.82
MAP1LC3B-205ENST00000564638 A0A1W2PP64 1363 aa9.92□□□□□ -0.82
MAP1LC3B-205ENST00000564638 NINLQ9Y2I6 1382 aa9.92□□□□□ -0.82
MAP1LC3B-205ENST00000564638 AMER1Q5JTC6 1135 aaPredicted RBP9.92□□□□□ -0.82
MAP1LC3B-205ENST00000564638 IFFO2Q5TF58 517 aa9.92□□□□□ -0.82
MAP1LC3B-205ENST00000564638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.92□□□□□ -0.82
MAP1LC3B-205ENST00000564638 NRKQ7Z2Y5 1582 aa9.92□□□□□ -0.82
MAP1LC3B-205ENST00000564638 CD163L1Q9NR16 1453 aa9.91□□□□□ -0.82
MAP1LC3B-205ENST00000564638 CPSF1Q10570 1443 aaKnown RBP9.91□□□□□ -0.82
MAP1LC3B-205ENST00000564638 MARF1Q9Y4F3 1742 aaKnown RBP9.91□□□□□ -0.82
MAP1LC3B-205ENST00000564638 TTC21BQ7Z4L5 1316 aa9.91□□□□□ -0.82
MAP1LC3B-205ENST00000564638 CCDC125Q86Z20 511 aa9.91□□□□□ -0.82
MAP1LC3B-205ENST00000564638 ANKRD36BQ8N2N9 1353 aa9.9□□□□□ -0.82
MAP1LC3B-205ENST00000564638 PIK3C2AO00443 1686 aa9.9□□□□□ -0.82
MAP1LC3B-205ENST00000564638 PHRF1Q9P1Y6 1649 aaKnown RBP9.9□□□□□ -0.82
MAP1LC3B-205ENST00000564638 NLRP6P59044 892 aa9.9□□□□□ -0.82
MAP1LC3B-205ENST00000564638 FNBP4Q8N3X1 1017 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms