RNA–Protein interactions for RNA: ENST00000564276.1

PKM-211, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-211ENST00000564276 KRT28Q7Z3Y7 464 aa13.79□□□□□ -0.2
PKM-211ENST00000564276 DHX57Q6P158 1386 aaKnown RBP13.79□□□□□ -0.2
PKM-211ENST00000564276 ZBTB7AO95365 584 aa13.78□□□□□ -0.2
PKM-211ENST00000564276 SYT17Q9BSW7 474 aa13.78□□□□□ -0.2
PKM-211ENST00000564276 FHDC1Q9C0D6 1143 aaPredicted RBP13.78□□□□□ -0.2
PKM-211ENST00000564276 SPATA31A5Q5VU36 1347 aa13.78□□□□□ -0.2
PKM-211ENST00000564276 SPATA31A7Q8IWB4 1347 aa13.78□□□□□ -0.2
PKM-211ENST00000564276 HFM1A2PYH4 1435 aa13.78□□□□□ -0.2
PKM-211ENST00000564276 TNS3Q68CZ2 1445 aa13.78□□□□□ -0.2
PKM-211ENST00000564276 ANKRD50Q9ULJ7 1429 aa13.78□□□□□ -0.2
PKM-211ENST00000564276 CCDC144AA2RUR9 1427 aa13.77□□□□□ -0.21
PKM-211ENST00000564276 PTGER2P43116 358 aa13.77□□□□□ -0.21
PKM-211ENST00000564276 KIF1AQ12756 1690 aa13.77□□□□□ -0.21
PKM-211ENST00000564276 COL14A1Q05707 1796 aaKnown RBP13.76□□□□□ -0.21
PKM-211ENST00000564276 CAPN15O75808 1086 aa13.76□□□□□ -0.21
PKM-211ENST00000564276 LMOD2Q6P5Q4 547 aa13.76□□□□□ -0.21
PKM-211ENST00000564276 ATF5Q9Y2D1 282 aaPredicted RBP13.76□□□□□ -0.21
PKM-211ENST00000564276 NAIPQ13075 1403 aa13.75□□□□□ -0.21
PKM-211ENST00000564276 ANO8Q9HCE9 1232 aaPredicted RBP13.75□□□□□ -0.21
PKM-211ENST00000564276 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
PKM-211ENST00000564276 PRAG1Q86YV5 1406 aa13.74□□□□□ -0.21
PKM-211ENST00000564276 FMN2Q9NZ56 1722 aa13.74□□□□□ -0.21
PKM-211ENST00000564276 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
PKM-211ENST00000564276 DLC1Q96QB1 1528 aa13.73□□□□□ -0.21
PKM-211ENST00000564276 RAB3GAP2Q9H2M9 1393 aa13.72□□□□□ -0.21
PKM-211ENST00000564276 ZBTB22O15209 634 aa13.71□□□□□ -0.21
PKM-211ENST00000564276 C1QBPQ07021 282 aaKnown RBP13.7□□□□□ -0.22
PKM-211ENST00000564276 HSPA6P17066 643 aa13.69□□□□□ -0.22
PKM-211ENST00000564276 FAM50AQ14320 339 aaKnown RBP13.69□□□□□ -0.22
PKM-211ENST00000564276 CLTCL1P53675 1640 aa13.68□□□□□ -0.22
PKM-211ENST00000564276 SPATA31A1Q5TZJ5 1347 aa13.68□□□□□ -0.22
PKM-211ENST00000564276 GPR162Q16538 588 aa13.68□□□□□ -0.22
PKM-211ENST00000564276 WAPLQ7Z5K2 1190 aa13.68□□□□□ -0.22
PKM-211ENST00000564276 KIF1BO60333 1816 aa13.68□□□□□ -0.22
PKM-211ENST00000564276 RGPD3A6NKT7 1758 aaPredicted RBP13.68□□□□□ -0.22
PKM-211ENST00000564276 RGPD4Q7Z3J3 1758 aa13.68□□□□□ -0.22
PKM-211ENST00000564276 SBF2Q86WG5 1849 aa13.67□□□□□ -0.22
PKM-211ENST00000564276 PSME1Q06323 249 aa13.67□□□□□ -0.22
PKM-211ENST00000564276 SBNO1A3KN83 1393 aa13.67□□□□□ -0.22
PKM-211ENST00000564276 ARHGEF10O15013 1369 aa13.67□□□□□ -0.22
PKM-211ENST00000564276 SLC34A2O95436 690 aa13.66□□□□□ -0.22
PKM-211ENST00000564276 ITGAEP38570 1179 aa13.66□□□□□ -0.22
PKM-211ENST00000564276 PDE3BQ13370 1112 aa13.66□□□□□ -0.22
PKM-211ENST00000564276 IFT172Q9UG01 1749 aa13.66□□□□□ -0.22
PKM-211ENST00000564276 TECPR2O15040 1411 aa13.65□□□□□ -0.22
PKM-211ENST00000564276 SGIP1Q9BQI5 828 aa13.65□□□□□ -0.22
PKM-211ENST00000564276 USP35Q9P2H5 1018 aa13.65□□□□□ -0.22
PKM-211ENST00000564276 PHF8Q9UPP1 1060 aa13.65□□□□□ -0.22
PKM-211ENST00000564276 PLEKHH1Q9ULM0 1364 aa13.65□□□□□ -0.22
PKM-211ENST00000564276 CRYBG1Q9Y4K1 1723 aa13.64□□□□□ -0.23
PKM-211ENST00000564276 TRPM3Q9HCF6 1732 aaPredicted RBP13.64□□□□□ -0.23
PKM-211ENST00000564276 COL13A1Q5TAT6 717 aaPredicted RBP13.63□□□□□ -0.23
PKM-211ENST00000564276 PELP1Q8IZL8 1130 aaKnown RBP13.63□□□□□ -0.23
PKM-211ENST00000564276 BCL11BQ9C0K0 894 aaPredicted RBP13.63□□□□□ -0.23
PKM-211ENST00000564276 STRN4Q9NRL3 753 aa13.63□□□□□ -0.23
PKM-211ENST00000564276 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
PKM-211ENST00000564276 NRXN1Q9ULB1 1477 aa13.62□□□□□ -0.23
PKM-211ENST00000564276 NUP155O75694 1391 aa13.62□□□□□ -0.23
PKM-211ENST00000564276 MYCNP04198 464 aaPredicted RBP13.62□□□□□ -0.23
PKM-211ENST00000564276 STK26Q9P289 416 aa13.62□□□□□ -0.23
PKM-211ENST00000564276 PTF1AQ7RTS3 328 aa13.6□□□□□ -0.23
PKM-211ENST00000564276 PROM2Q8N271 834 aa13.6□□□□□ -0.23
PKM-211ENST00000564276 ARXQ96QS3 562 aa13.6□□□□□ -0.23
PKM-211ENST00000564276 PRDM11Q9NQV5 511 aa13.6□□□□□ -0.23
PKM-211ENST00000564276 PPLO60437 1756 aa13.6□□□□□ -0.23
PKM-211ENST00000564276 PEAK1Q9H792 1746 aa13.59□□□□□ -0.23
PKM-211ENST00000564276 ATP10DQ9P241 1426 aa13.59□□□□□ -0.23
PKM-211ENST00000564276 VGFO15240 615 aaPredicted RBP13.59□□□□□ -0.23
PKM-211ENST00000564276 PRELPP51888 382 aa13.59□□□□□ -0.23
PKM-211ENST00000564276 CHRNA2Q15822 529 aa13.59□□□□□ -0.23
PKM-211ENST00000564276 MTFR1LQ9H019 292 aa13.59□□□□□ -0.23
PKM-211ENST00000564276 MAP3K5Q99683 1374 aa13.58□□□□□ -0.23
PKM-211ENST00000564276 PLSCR1O15162 318 aa13.58□□□□□ -0.24
PKM-211ENST00000564276 PMFBP1Q8TBY8 1022 aa13.58□□□□□ -0.24
PKM-211ENST00000564276 KNDC1Q76NI1 1749 aa13.58□□□□□ -0.24
PKM-211ENST00000564276 PARP4Q9UKK3 1724 aaKnown RBP13.56□□□□□ -0.24
PKM-211ENST00000564276 BARGINQ6ZT62 677 aa13.56□□□□□ -0.24
PKM-211ENST00000564276 KLHL34Q8N239 644 aa13.56□□□□□ -0.24
PKM-211ENST00000564276 STK32BQ9NY57 414 aa13.56□□□□□ -0.24
PKM-211ENST00000564276 PCNTO95613 3336 aa13.56□□□□□ -0.24
PKM-211ENST00000564276 ZNF316A6NFI3 1004 aaPredicted RBP13.55□□□□□ -0.24
PKM-211ENST00000564276 SLC15A2Q16348 729 aa13.55□□□□□ -0.24
PKM-211ENST00000564276 GPBP1L1Q9HC44 474 aaPredicted RBP13.55□□□□□ -0.24
PKM-211ENST00000564276 KIAA0232Q92628 1395 aa13.55□□□□□ -0.24
PKM-211ENST00000564276 TNS4Q8IZW8 715 aa13.54□□□□□ -0.24
PKM-211ENST00000564276 ZNF526Q8TF50 670 aaPredicted RBP13.54□□□□□ -0.24
PKM-211ENST00000564276 DNAJC5GQ8N7S2 189 aa13.53□□□□□ -0.24
PKM-211ENST00000564276 ROCK1Q13464 1354 aa13.53□□□□□ -0.24
PKM-211ENST00000564276 SSH2Q76I76 1423 aa13.53□□□□□ -0.24
PKM-211ENST00000564276 LARP1Q6PKG0 1096 aaKnown RBP13.52□□□□□ -0.25
PKM-211ENST00000564276 PHRF1Q9P1Y6 1649 aaKnown RBP13.52□□□□□ -0.25
PKM-211ENST00000564276 OVOS2A0A0G2JMS6 1433 aa13.51□□□□□ -0.25
PKM-211ENST00000564276 OVOS2A0A0J9YW53 1432 aa13.51□□□□□ -0.25
PKM-211ENST00000564276 OVOS2Q6IE36 1432 aa13.51□□□□□ -0.25
PKM-211ENST00000564276 YBX3P16989 372 aaKnown RBP eCLIP13.51□□□□□ -0.256e-18■□□□□ 8.7
PKM-211ENST00000564276 TMEM132EQ6IEE7 984 aa13.51□□□□□ -0.25
PKM-211ENST00000564276 TCP11L2Q8N4U5 519 aa13.51□□□□□ -0.25
PKM-211ENST00000564276 NLGN2Q8NFZ4 835 aa13.51□□□□□ -0.25
PKM-211ENST00000564276 EVA1CP58658 441 aa13.5□□□□□ -0.25
PKM-211ENST00000564276 ZC3H6P61129 1189 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms