RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 ERBB4Q15303 1308 aa8.62□□□□□ -1.03
HDGFL3-202ENST00000562702 CTHP32929 405 aa8.62□□□□□ -1.03
HDGFL3-202ENST00000562702 SPIRE2Q8WWL2 714 aa8.62□□□□□ -1.03
HDGFL3-202ENST00000562702 PURBQ96QR8 312 aaKnown RBP8.62□□□□□ -1.03
HDGFL3-202ENST00000562702 TTLL12Q14166 644 aaPredicted RBP8.61□□□□□ -1.03
HDGFL3-202ENST00000562702 DIXDC1Q155Q3 683 aa8.61□□□□□ -1.03
HDGFL3-202ENST00000562702 MAN1A2O60476 641 aa8.6□□□□□ -1.03
HDGFL3-202ENST00000562702 UPP2O95045 317 aa8.6□□□□□ -1.03
HDGFL3-202ENST00000562702 TIMP2P16035 220 aa8.6□□□□□ -1.03
HDGFL3-202ENST00000562702 MOXD2PA6NHM9 499 aa8.59□□□□□ -1.03
HDGFL3-202ENST00000562702 NDUFV2P19404 249 aa8.59□□□□□ -1.03
HDGFL3-202ENST00000562702 LORP23490 312 aaPredicted RBP8.59□□□□□ -1.03
HDGFL3-202ENST00000562702 ARID5BQ14865 1188 aa8.59□□□□□ -1.03
HDGFL3-202ENST00000562702 VSIG8P0DPA2 414 aa8.58□□□□□ -1.04
HDGFL3-202ENST00000562702 GJA5P36382 358 aa8.57□□□□□ -1.04
HDGFL3-202ENST00000562702 AGERQ15109 404 aa8.57□□□□□ -1.04
HDGFL3-202ENST00000562702 NR5A1Q13285 461 aa8.56□□□□□ -1.04
HDGFL3-202ENST00000562702 CDK15Q96Q40 435 aa8.56□□□□□ -1.04
HDGFL3-202ENST00000562702 KDM2AQ9Y2K7 1162 aa8.56□□□□□ -1.04
HDGFL3-202ENST00000562702 ZIC2O95409 532 aaPredicted RBP8.55□□□□□ -1.04
HDGFL3-202ENST00000562702 LYPD8Q6UX82 237 aa8.55□□□□□ -1.04
HDGFL3-202ENST00000562702 SPTLC1O15269 473 aa8.54□□□□□ -1.04
HDGFL3-202ENST00000562702 C6orf118Q5T5N4 469 aa8.54□□□□□ -1.04
HDGFL3-202ENST00000562702 SOBPA7XYQ1 873 aa8.53□□□□□ -1.04
HDGFL3-202ENST00000562702 BMP2P12643 396 aa8.53□□□□□ -1.04
HDGFL3-202ENST00000562702 BPHLQ86WA6 291 aaPredicted RBP8.53□□□□□ -1.04
HDGFL3-202ENST00000562702 BEGAINQ9BUH8 593 aa8.53□□□□□ -1.04
HDGFL3-202ENST00000562702 KLF16Q9BXK1 252 aaPredicted RBP8.53□□□□□ -1.04
HDGFL3-202ENST00000562702 GIGYF2Q6Y7W6 1299 aaKnown RBP8.52□□□□□ -1.05
HDGFL3-202ENST00000562702 VSIG10Q8N0Z9 540 aa8.52□□□□□ -1.05
HDGFL3-202ENST00000562702 ZBTB3Q9H5J0 574 aa8.52□□□□□ -1.05
HDGFL3-202ENST00000562702 AMHR2Q16671 573 aa8.51□□□□□ -1.05
HDGFL3-202ENST00000562702 ARMC2Q8NEN0 867 aa8.51□□□□□ -1.05
HDGFL3-202ENST00000562702 FOXJ1Q92949 421 aa8.51□□□□□ -1.05
HDGFL3-202ENST00000562702 ITPKCQ96DU7 683 aa8.51□□□□□ -1.05
HDGFL3-202ENST00000562702 PPFIA3O75145 1194 aa8.5□□□□□ -1.05
HDGFL3-202ENST00000562702 RSBN1LQ6PCB5 846 aaPredicted RBP8.5□□□□□ -1.05
HDGFL3-202ENST00000562702 TBC1D2Q9BYX2 928 aa8.5□□□□□ -1.05
HDGFL3-202ENST00000562702 ZFAND3Q9H8U3 227 aa8.5□□□□□ -1.05
HDGFL3-202ENST00000562702 RNF225M0QZC1 329 aaPredicted RBP8.49□□□□□ -1.05
HDGFL3-202ENST00000562702 KCNMA1Q12791 1236 aa8.49□□□□□ -1.05
HDGFL3-202ENST00000562702 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.49□□□□□ -1.05
HDGFL3-202ENST00000562702 LINC00528Q8N1L1 170 aa8.49□□□□□ -1.05
HDGFL3-202ENST00000562702 PRPF38BQ5VTL8 546 aaKnown RBP8.48□□□□□ -1.05
HDGFL3-202ENST00000562702 BARGINQ6ZT62 677 aa8.48□□□□□ -1.05
HDGFL3-202ENST00000562702 MAP10Q9P2G4 905 aa8.48□□□□□ -1.05
HDGFL3-202ENST00000562702 F12P00748 615 aaPredicted RBP8.47□□□□□ -1.05
HDGFL3-202ENST00000562702 HRCP23327 699 aa8.47□□□□□ -1.05
HDGFL3-202ENST00000562702 MEIOBQ8N635 442 aa8.47□□□□□ -1.05
HDGFL3-202ENST00000562702 TSEN34Q9BSV6 310 aaKnown RBP8.47□□□□□ -1.05
HDGFL3-202ENST00000562702 CFAP99D6REC4 459 aa8.46□□□□□ -1.06
HDGFL3-202ENST00000562702 NR3C2P08235 984 aa8.46□□□□□ -1.06
HDGFL3-202ENST00000562702 NBPF14Q5TI25 921 aa8.46□□□□□ -1.06
HDGFL3-202ENST00000562702 TSC1Q92574 1164 aa8.46□□□□□ -1.06
HDGFL3-202ENST00000562702 LOC100996750A0A140TA64 210 aa8.45□□□□□ -1.06
HDGFL3-202ENST00000562702 GRM5P41594 1212 aa8.45□□□□□ -1.06
HDGFL3-202ENST00000562702 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.45□□□□□ -1.06
HDGFL3-202ENST00000562702 VASH1Q7L8A9 365 aaPredicted RBP8.45□□□□□ -1.06
HDGFL3-202ENST00000562702 TMEM151AQ8N4L1 468 aa8.45□□□□□ -1.06
HDGFL3-202ENST00000562702 KRTAP4-6Q9BYQ5 205 aa8.45□□□□□ -1.06
HDGFL3-202ENST00000562702 PCDHB15Q9Y5E8 787 aa8.45□□□□□ -1.06
HDGFL3-202ENST00000562702 EMILIN1Q9Y6C2 1016 aa8.45□□□□□ -1.06
HDGFL3-202ENST00000562702 NUTM2BA6NNL0 878 aaPredicted RBP8.44□□□□□ -1.06
HDGFL3-202ENST00000562702 NUTM2EB1AL46 878 aaPredicted RBP8.44□□□□□ -1.06
HDGFL3-202ENST00000562702 FSHRP23945 695 aa8.44□□□□□ -1.06
HDGFL3-202ENST00000562702 NUTM2DQ5VT03 806 aaPredicted RBP8.44□□□□□ -1.06
HDGFL3-202ENST00000562702 RIC3Q7Z5B4 369 aa8.44□□□□□ -1.06
HDGFL3-202ENST00000562702 NUTM2AQ8IVF1 878 aaPredicted RBP8.44□□□□□ -1.06
HDGFL3-202ENST00000562702 SOS2Q07890 1332 aaPredicted RBP8.44□□□□□ -1.06
HDGFL3-202ENST00000562702 MAP4K5Q9Y4K4 846 aa8.43□□□□□ -1.06
HDGFL3-202ENST00000562702 ZMYND10O75800 440 aa8.42□□□□□ -1.06
HDGFL3-202ENST00000562702 SUZ12Q15022 739 aaKnown RBP8.42□□□□□ -1.06
HDGFL3-202ENST00000562702 CCDC116Q8IYX3 515 aa8.42□□□□□ -1.06
HDGFL3-202ENST00000562702 KCTD17Q8N5Z5 321 aa8.42□□□□□ -1.06
HDGFL3-202ENST00000562702 HELBQ8NG08 1087 aaPredicted RBP8.42□□□□□ -1.06
HDGFL3-202ENST00000562702 DNMT3LQ9UJW3 386 aa8.42□□□□□ -1.06
HDGFL3-202ENST00000562702 TTLL8A6PVC2 850 aa8.41□□□□□ -1.06
HDGFL3-202ENST00000562702 GDF11O95390 407 aa8.41□□□□□ -1.06
HDGFL3-202ENST00000562702 CSPP1Q1MSJ5 1256 aa8.41□□□□□ -1.06
HDGFL3-202ENST00000562702 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
HDGFL3-202ENST00000562702 PGPEP1Q9NXJ5 209 aa8.41□□□□□ -1.06
HDGFL3-202ENST00000562702 MAGEB6P1A0A0J9YX57 407 aa8.4□□□□□ -1.06
HDGFL3-202ENST00000562702 TRMT44Q8IYL2 757 aaKnown RBP8.4□□□□□ -1.06
HDGFL3-202ENST00000562702 CABLES1Q8TDN4 633 aa8.4□□□□□ -1.06
HDGFL3-202ENST00000562702 CNTNAP3BQ96NU0 1288 aa8.4□□□□□ -1.06
HDGFL3-202ENST00000562702 C1QTNF2Q9BXJ5 285 aa8.4□□□□□ -1.06
HDGFL3-202ENST00000562702 CNTNAP3Q9BZ76 1288 aa8.4□□□□□ -1.06
HDGFL3-202ENST00000562702 RASSF7Q02833 373 aa8.39□□□□□ -1.07
HDGFL3-202ENST00000562702 GPKOWQ92917 476 aaPredicted RBP eCLIP8.39□□□□□ -1.07
HDGFL3-202ENST00000562702 PER1O15534 1290 aaPredicted RBP8.38□□□□□ -1.07
HDGFL3-202ENST00000562702 PTSQ03393 145 aa8.38□□□□□ -1.07
HDGFL3-202ENST00000562702 SH3RF1Q7Z6J0 888 aa8.38□□□□□ -1.07
HDGFL3-202ENST00000562702 PARP9Q8IXQ6 854 aa8.38□□□□□ -1.07
HDGFL3-202ENST00000562702 ADAMTS8Q9UP79 889 aa8.38□□□□□ -1.07
HDGFL3-202ENST00000562702 ZC3H15Q8WU90 426 aaKnown RBP8.37□□□□□ -1.07
HDGFL3-202ENST00000562702 TUSC1Q2TAM9 212 aa8.36□□□□□ -1.07
HDGFL3-202ENST00000562702 SVOPQ8N4V2 548 aa8.36□□□□□ -1.07
HDGFL3-202ENST00000562702 NANOS1Q8WY41 292 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-202ENST00000562702 CARD14Q9BXL6 1004 aa8.36□□□□□ -1.07
HDGFL3-202ENST00000562702 COL25A1Q9BXS0 654 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms