RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 BRINP3Q76B58 766 aa17.37■□□□□ 0.37
CMTM4-203ENST00000561680 CRYBG1Q9Y4K1 1723 aa17.37■□□□□ 0.37
CMTM4-203ENST00000561680 KNSTRNQ9Y448 316 aa17.36■□□□□ 0.37
CMTM4-203ENST00000561680 AMER1Q5JTC6 1135 aaPredicted RBP17.35■□□□□ 0.37
CMTM4-203ENST00000561680 NSD2O96028 1365 aa17.35■□□□□ 0.37
CMTM4-203ENST00000561680 CGNL1Q0VF96 1302 aa17.34■□□□□ 0.37
CMTM4-203ENST00000561680 NPHP3Q7Z494 1330 aa17.34■□□□□ 0.37
CMTM4-203ENST00000561680 ABCA3Q99758 1704 aa17.34■□□□□ 0.37
CMTM4-203ENST00000561680 TTC21AQ8NDW8 1320 aa17.33■□□□□ 0.36
CMTM4-203ENST00000561680 TOM1O60784 492 aa17.33■□□□□ 0.36
CMTM4-203ENST00000561680 COL16A1Q07092 1604 aaPredicted RBP17.32■□□□□ 0.36
CMTM4-203ENST00000561680 TTC21BQ7Z4L5 1316 aa17.32■□□□□ 0.36
CMTM4-203ENST00000561680 FOXO3O43524 673 aa17.32■□□□□ 0.36
CMTM4-203ENST00000561680 LTN1O94822 1766 aa17.32■□□□□ 0.36
CMTM4-203ENST00000561680 PHRF1Q9P1Y6 1649 aaKnown RBP17.32■□□□□ 0.36
CMTM4-203ENST00000561680 PSME1Q06323 249 aa17.31■□□□□ 0.36
CMTM4-203ENST00000561680 MED1Q15648 1581 aaPredicted RBP17.31■□□□□ 0.36
CMTM4-203ENST00000561680 OVOS2A0A0J9YW53 1432 aa17.3■□□□□ 0.36
CMTM4-203ENST00000561680 OVOS2Q6IE36 1432 aa17.3■□□□□ 0.36
CMTM4-203ENST00000561680 SBNO1A3KN83 1393 aa17.3■□□□□ 0.36
CMTM4-203ENST00000561680 PARD3Q8TEW0 1356 aa17.3■□□□□ 0.36
CMTM4-203ENST00000561680 TNS3Q68CZ2 1445 aa17.3■□□□□ 0.36
CMTM4-203ENST00000561680 UBAP1LF5GYI3 381 aa17.29■□□□□ 0.36
CMTM4-203ENST00000561680 KRT28Q7Z3Y7 464 aa17.29■□□□□ 0.36
CMTM4-203ENST00000561680 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.29■□□□□ 0.36
CMTM4-203ENST00000561680 SOS2Q07890 1332 aaPredicted RBP17.28■□□□□ 0.36
CMTM4-203ENST00000561680 FYB1O15117 783 aa17.28■□□□□ 0.36
CMTM4-203ENST00000561680 DDX17Q92841 729 aaKnown RBP17.28■□□□□ 0.36
CMTM4-203ENST00000561680 COL22A1Q8NFW1 1626 aaPredicted RBP17.28■□□□□ 0.36
CMTM4-203ENST00000561680 USP31Q70CQ4 1352 aa17.28■□□□□ 0.36
CMTM4-203ENST00000561680 XPCQ01831 940 aaPredicted RBP17.27■□□□□ 0.36
CMTM4-203ENST00000561680 CC2D1BQ5T0F9 858 aaKnown RBP17.27■□□□□ 0.36
CMTM4-203ENST00000561680 NME9Q86XW9 330 aa17.27■□□□□ 0.36
CMTM4-203ENST00000561680 PRKRIP1Q9H875 184 aaPredicted RBP17.27■□□□□ 0.36
CMTM4-203ENST00000561680 SLIT3O75094 1523 aa17.26■□□□□ 0.35
CMTM4-203ENST00000561680 ANP32CO43423 234 aa17.26■□□□□ 0.35
CMTM4-203ENST00000561680 SHPRHQ149N8 1683 aa17.26■□□□□ 0.35
CMTM4-203ENST00000561680 GGNBP2Q9H3C7 697 aa17.25■□□□□ 0.35
CMTM4-203ENST00000561680 PAK3O75914 559 aaPredicted RBP17.24■□□□□ 0.35
CMTM4-203ENST00000561680 RALBP1Q15311 655 aa17.24■□□□□ 0.35
CMTM4-203ENST00000561680 SPATA31A3Q5VYP0 1347 aa17.23■□□□□ 0.35
CMTM4-203ENST00000561680 NFAT5O94916 1531 aa17.23■□□□□ 0.35
CMTM4-203ENST00000561680 PIP4K2BP78356 416 aa17.23■□□□□ 0.35
CMTM4-203ENST00000561680 ZRANB1Q9UGI0 708 aa17.23■□□□□ 0.35
CMTM4-203ENST00000561680 ARHGEF10O15013 1369 aa17.23■□□□□ 0.35
CMTM4-203ENST00000561680 CNGB1Q14028 1251 aaPredicted RBP17.22■□□□□ 0.35
CMTM4-203ENST00000561680 ABTB2Q8N961 1025 aa17.22■□□□□ 0.35
CMTM4-203ENST00000561680 RGPD5Q99666 1765 aa17.22■□□□□ 0.35
CMTM4-203ENST00000561680 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.35
CMTM4-203ENST00000561680 PEAK1Q9H792 1746 aa17.21■□□□□ 0.35
CMTM4-203ENST00000561680 MORC1Q86VD1 984 aa17.21■□□□□ 0.35
CMTM4-203ENST00000561680 COG3Q96JB2 828 aa17.21■□□□□ 0.35
CMTM4-203ENST00000561680 USP19O94966 1318 aa17.21■□□□□ 0.34
CMTM4-203ENST00000561680 MYBBP1AQ9BQG0 1328 aaKnown RBP17.2■□□□□ 0.34
CMTM4-203ENST00000561680 NLRP6P59044 892 aa17.19■□□□□ 0.34
CMTM4-203ENST00000561680 MIER1Q8N108 512 aa17.19■□□□□ 0.34
CMTM4-203ENST00000561680 SMG6Q86US8 1419 aaKnown RBP17.19■□□□□ 0.34
CMTM4-203ENST00000561680 AATKQ6ZMQ8 1374 aa17.18■□□□□ 0.34
CMTM4-203ENST00000561680 NLRP13Q86W25 1043 aa17.18■□□□□ 0.34
CMTM4-203ENST00000561680 COL18A1P39060 1754 aa17.17■□□□□ 0.34
CMTM4-203ENST00000561680 NUTM2GQ5VZR2 741 aa17.17■□□□□ 0.34
CMTM4-203ENST00000561680 LMOD2Q6P5Q4 547 aa17.16■□□□□ 0.34
CMTM4-203ENST00000561680 PNPLA6Q8IY17 1366 aa17.15■□□□□ 0.34
CMTM4-203ENST00000561680 PPP2R1AP30153 589 aa17.15■□□□□ 0.34
CMTM4-203ENST00000561680 LRRC59Q96AG4 307 aaKnown RBP17.15■□□□□ 0.34
CMTM4-203ENST00000561680 CDK12Q9NYV4 1490 aaPredicted RBP17.14■□□□□ 0.33
CMTM4-203ENST00000561680 TNNT2P45379 298 aaPredicted RBP17.14■□□□□ 0.33
CMTM4-203ENST00000561680 ABCC6O95255 1503 aa17.14■□□□□ 0.33
CMTM4-203ENST00000561680 RGPD2P0DJD1 1756 aa17.13■□□□□ 0.33
CMTM4-203ENST00000561680 COL3A1P02461 1466 aaPredicted RBP17.12■□□□□ 0.33
CMTM4-203ENST00000561680 CCER2I3L3R5 266 aa17.12■□□□□ 0.33
CMTM4-203ENST00000561680 KCNH5Q8NCM2 988 aa17.12■□□□□ 0.33
CMTM4-203ENST00000561680 LMO7Q8WWI1 1683 aa17.12■□□□□ 0.33
CMTM4-203ENST00000561680 PLCH1Q4KWH8 1693 aa17.11■□□□□ 0.33
CMTM4-203ENST00000561680 FAM208AQ9UK61 1670 aaKnown RBP17.11■□□□□ 0.33
CMTM4-203ENST00000561680 COL14A1Q05707 1796 aaKnown RBP17.1■□□□□ 0.33
CMTM4-203ENST00000561680 FBLN1P23142 703 aa17.1■□□□□ 0.33
CMTM4-203ENST00000561680 RGPD1P0DJD0 1748 aa17.1■□□□□ 0.33
CMTM4-203ENST00000561680 GCP02774 474 aa17.09■□□□□ 0.33
CMTM4-203ENST00000561680 POLKQ9UBT6 870 aa17.09■□□□□ 0.33
CMTM4-203ENST00000561680 RTL1A6NKG5 1358 aa17.09■□□□□ 0.33
CMTM4-203ENST00000561680 KIF24Q5T7B8 1368 aa17.09■□□□□ 0.33
CMTM4-203ENST00000561680 CPDO75976 1380 aa17.08■□□□□ 0.32
CMTM4-203ENST00000561680 INSRP06213 1382 aa17.08■□□□□ 0.32
CMTM4-203ENST00000561680 JCADQ9P266 1359 aa17.08■□□□□ 0.32
CMTM4-203ENST00000561680 MAP3K19Q56UN5 1328 aa17.08■□□□□ 0.32
CMTM4-203ENST00000561680 SOX12O15370 315 aa17.08■□□□□ 0.32
CMTM4-203ENST00000561680 MTHFSP49914 203 aa17.08■□□□□ 0.32
CMTM4-203ENST00000561680 RRS1Q15050 365 aaKnown RBP17.08■□□□□ 0.32
CMTM4-203ENST00000561680 EMILIN1Q9Y6C2 1016 aa17.08■□□□□ 0.32
CMTM4-203ENST00000561680 NWD2Q9ULI1 1742 aa17.07■□□□□ 0.32
CMTM4-203ENST00000561680 CCDC184Q52MB2 194 aa17.07■□□□□ 0.32
CMTM4-203ENST00000561680 CABLES1Q8TDN4 633 aa17.07■□□□□ 0.32
CMTM4-203ENST00000561680 CAMTA1Q9Y6Y1 1673 aa17.07■□□□□ 0.32
CMTM4-203ENST00000561680 FLT4P35916 1363 aa17.06■□□□□ 0.32
CMTM4-203ENST00000561680 HSPA1LP34931 641 aa17.06■□□□□ 0.32
CMTM4-203ENST00000561680 NRAPQ86VF7 1730 aa17.05■□□□□ 0.32
CMTM4-203ENST00000561680 PLEKHG5O94827 1062 aa17.05■□□□□ 0.32
CMTM4-203ENST00000561680 ARHGEF25Q86VW2 580 aa17.05■□□□□ 0.32
CMTM4-203ENST00000561680 MRS2Q9HD23 443 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms