RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 KTN1Q86UP2 1357 aaKnown RBP15.97■□□□□ 0.15
HERC1-214ENST00000561400 XPCQ01831 940 aaPredicted RBP15.97■□□□□ 0.15
HERC1-214ENST00000561400 HDGFL2Q7Z4V5 671 aaPredicted RBP15.97■□□□□ 0.15
HERC1-214ENST00000561400 USP6P35125 1406 aa15.97■□□□□ 0.15
HERC1-214ENST00000561400 ZNF692Q9BU19 519 aaPredicted RBP15.96■□□□□ 0.15
HERC1-214ENST00000561400 PSME1Q06323 249 aa15.96■□□□□ 0.15
HERC1-214ENST00000561400 NRKQ7Z2Y5 1582 aa15.96■□□□□ 0.15
HERC1-214ENST00000561400 NPHP3Q7Z494 1330 aa15.95■□□□□ 0.14
HERC1-214ENST00000561400 PER1O15534 1290 aaPredicted RBP15.95■□□□□ 0.14
HERC1-214ENST00000561400 TRPM3Q9HCF6 1732 aaPredicted RBP15.95■□□□□ 0.14
HERC1-214ENST00000561400 SSH2Q76I76 1423 aa15.95■□□□□ 0.14
HERC1-214ENST00000561400 PXDNQ92626 1479 aa15.94■□□□□ 0.14
HERC1-214ENST00000561400 KRT28Q7Z3Y7 464 aa15.94■□□□□ 0.14
HERC1-214ENST00000561400 NSD3Q9BZ95 1437 aa15.94■□□□□ 0.14
HERC1-214ENST00000561400 EDC4Q6P2E9 1401 aaKnown RBP15.93■□□□□ 0.14
HERC1-214ENST00000561400 AHDC1Q5TGY3 1603 aaPredicted RBP15.93■□□□□ 0.14
HERC1-214ENST00000561400 SOS2Q07890 1332 aaPredicted RBP15.92■□□□□ 0.14
HERC1-214ENST00000561400 TTC21BQ7Z4L5 1316 aa15.91■□□□□ 0.14
HERC1-214ENST00000561400 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.91■□□□□ 0.14
HERC1-214ENST00000561400 PHLPP1O60346 1717 aa15.91■□□□□ 0.14
HERC1-214ENST00000561400 PAK3O75914 559 aaPredicted RBP15.9■□□□□ 0.14
HERC1-214ENST00000561400 ALS2Q96Q42 1657 aa15.9■□□□□ 0.14
HERC1-214ENST00000561400 KNSTRNQ9Y448 316 aa15.9■□□□□ 0.14
HERC1-214ENST00000561400 PIK3C2AO00443 1686 aa15.89■□□□□ 0.14
HERC1-214ENST00000561400 KIF20BQ96Q89 1820 aa15.89■□□□□ 0.13
HERC1-214ENST00000561400 COL16A1Q07092 1604 aaPredicted RBP15.89■□□□□ 0.13
HERC1-214ENST00000561400 BRD4O60885 1362 aaPredicted RBP15.89■□□□□ 0.13
HERC1-214ENST00000561400 SBNO1A3KN83 1393 aa15.88■□□□□ 0.13
HERC1-214ENST00000561400 FYB1O15117 783 aa15.88■□□□□ 0.13
HERC1-214ENST00000561400 AMER1Q5JTC6 1135 aaPredicted RBP15.88■□□□□ 0.13
HERC1-214ENST00000561400 NME9Q86XW9 330 aa15.88■□□□□ 0.13
HERC1-214ENST00000561400 SALL2Q9Y467 1007 aaPredicted RBP15.88■□□□□ 0.13
HERC1-214ENST00000561400 TTC21AQ8NDW8 1320 aa15.88■□□□□ 0.13
HERC1-214ENST00000561400 SPATA31A3Q5VYP0 1347 aa15.87■□□□□ 0.13
HERC1-214ENST00000561400 ARXQ96QS3 562 aa15.87■□□□□ 0.13
HERC1-214ENST00000561400 ZRANB1Q9UGI0 708 aa15.87■□□□□ 0.13
HERC1-214ENST00000561400 CGNL1Q0VF96 1302 aa15.86■□□□□ 0.13
HERC1-214ENST00000561400 MARF1Q9Y4F3 1742 aaKnown RBP15.86■□□□□ 0.13
HERC1-214ENST00000561400 TNS3Q68CZ2 1445 aa15.86■□□□□ 0.13
HERC1-214ENST00000561400 ABTB2Q8N961 1025 aa15.86■□□□□ 0.13
HERC1-214ENST00000561400 GGNBP2Q9H3C7 697 aa15.86■□□□□ 0.13
HERC1-214ENST00000561400 CNGB1Q14028 1251 aaPredicted RBP15.85■□□□□ 0.13
HERC1-214ENST00000561400 NUTM2GQ5VZR2 741 aa15.85■□□□□ 0.13
HERC1-214ENST00000561400 LMOD2Q6P5Q4 547 aa15.85■□□□□ 0.13
HERC1-214ENST00000561400 ANKRD26Q9UPS8 1709 aa15.85■□□□□ 0.13
HERC1-214ENST00000561400 CC2D1BQ5T0F9 858 aaKnown RBP15.84■□□□□ 0.13
HERC1-214ENST00000561400 LRRC59Q96AG4 307 aaKnown RBP15.84■□□□□ 0.13
HERC1-214ENST00000561400 HSPA1LP34931 641 aa15.83■□□□□ 0.13
HERC1-214ENST00000561400 NLRP6P59044 892 aa15.83■□□□□ 0.13
HERC1-214ENST00000561400 ERICH6BQ5W0A0 696 aa15.83■□□□□ 0.13
HERC1-214ENST00000561400 USP54Q70EL1 1684 aa15.83■□□□□ 0.12
HERC1-214ENST00000561400 FBXO41Q8TF61 875 aa15.83■□□□□ 0.12
HERC1-214ENST00000561400 NPC1L1Q9UHC9 1359 aa15.82■□□□□ 0.12
HERC1-214ENST00000561400 OVOS2A0A0J9YW53 1432 aa15.82■□□□□ 0.12
HERC1-214ENST00000561400 OVOS2Q6IE36 1432 aa15.82■□□□□ 0.12
HERC1-214ENST00000561400 USP31Q70CQ4 1352 aa15.82■□□□□ 0.12
HERC1-214ENST00000561400 ARHGEF10O15013 1369 aa15.81■□□□□ 0.12
HERC1-214ENST00000561400 CRYBG1Q9Y4K1 1723 aa15.81■□□□□ 0.12
HERC1-214ENST00000561400 NSD2O96028 1365 aa15.81■□□□□ 0.12
HERC1-214ENST00000561400 MED1Q15648 1581 aaPredicted RBP15.8■□□□□ 0.12
HERC1-214ENST00000561400 DIEXFQ68CQ4 756 aaKnown RBP15.8■□□□□ 0.12
HERC1-214ENST00000561400 KLHL34Q8N239 644 aa15.8■□□□□ 0.12
HERC1-214ENST00000561400 NLRP13Q86W25 1043 aa15.8■□□□□ 0.12
HERC1-214ENST00000561400 COG3Q96JB2 828 aa15.8■□□□□ 0.12
HERC1-214ENST00000561400 PNPLA6Q8IY17 1366 aa15.79■□□□□ 0.12
HERC1-214ENST00000561400 CABLES1Q8TDN4 633 aa15.79■□□□□ 0.12
HERC1-214ENST00000561400 COL22A1Q8NFW1 1626 aaPredicted RBP15.79■□□□□ 0.12
HERC1-214ENST00000561400 SHPRHQ149N8 1683 aa15.78■□□□□ 0.12
HERC1-214ENST00000561400 ABCA3Q99758 1704 aa15.78■□□□□ 0.12
HERC1-214ENST00000561400 PHRF1Q9P1Y6 1649 aaKnown RBP15.78■□□□□ 0.12
HERC1-214ENST00000561400 USP19O94966 1318 aa15.78■□□□□ 0.12
HERC1-214ENST00000561400 FBLN1P23142 703 aa15.78■□□□□ 0.12
HERC1-214ENST00000561400 MORC1Q86VD1 984 aa15.78■□□□□ 0.12
HERC1-214ENST00000561400 SLIT3O75094 1523 aa15.77■□□□□ 0.11
HERC1-214ENST00000561400 MAP2P11137 1827 aaKnown RBP15.77■□□□□ 0.11
HERC1-214ENST00000561400 TNNT2P45379 298 aaPredicted RBP15.76■□□□□ 0.11
HERC1-214ENST00000561400 PARD3Q8TEW0 1356 aa15.76■□□□□ 0.11
HERC1-214ENST00000561400 SOX12O15370 315 aa15.76■□□□□ 0.11
HERC1-214ENST00000561400 PRKRIP1Q9H875 184 aaPredicted RBP15.76■□□□□ 0.11
HERC1-214ENST00000561400 CCDC136Q96JN2 1154 aa15.75■□□□□ 0.11
HERC1-214ENST00000561400 JCADQ9P266 1359 aa15.75■□□□□ 0.11
HERC1-214ENST00000561400 GCP02774 474 aa15.75■□□□□ 0.11
HERC1-214ENST00000561400 NFAT5O94916 1531 aa15.74■□□□□ 0.11
HERC1-214ENST00000561400 NEFLP07196 543 aa15.73■□□□□ 0.11
HERC1-214ENST00000561400 TSHZ2Q9NRE2 1034 aa15.73■□□□□ 0.11
HERC1-214ENST00000561400 LTN1O94822 1766 aa15.73■□□□□ 0.11
HERC1-214ENST00000561400 ANP32CO43423 234 aa15.72■□□□□ 0.11
HERC1-214ENST00000561400 RALBP1Q15311 655 aa15.72■□□□□ 0.11
HERC1-214ENST00000561400 KCNH5Q8NCM2 988 aa15.72■□□□□ 0.11
HERC1-214ENST00000561400 RRS1Q15050 365 aaKnown RBP15.71■□□□□ 0.11
HERC1-214ENST00000561400 AATKQ6ZMQ8 1374 aa15.71■□□□□ 0.1
HERC1-214ENST00000561400 ZC3H6P61129 1189 aaKnown RBP15.71■□□□□ 0.1
HERC1-214ENST00000561400 PPP2R1AP30153 589 aa15.7■□□□□ 0.1
HERC1-214ENST00000561400 HAP1P54257 671 aaPredicted RBP15.7■□□□□ 0.1
HERC1-214ENST00000561400 POLKQ9UBT6 870 aa15.7■□□□□ 0.1
HERC1-214ENST00000561400 NUTM2BA6NNL0 878 aaPredicted RBP15.69■□□□□ 0.1
HERC1-214ENST00000561400 NUTM2EB1AL46 878 aaPredicted RBP15.69■□□□□ 0.1
HERC1-214ENST00000561400 PDIA4P13667 645 aaKnown RBP15.69■□□□□ 0.1
HERC1-214ENST00000561400 NUTM2AQ8IVF1 878 aaPredicted RBP15.69■□□□□ 0.1
HERC1-214ENST00000561400 EMILIN1Q9Y6C2 1016 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms