RNA–Protein interactions for RNA: ENST00000561156.1

TNFAIP2-210, Transcript of TNF alpha induced protein 2, humanhuman

TSL 4

Gene TNFAIP2, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-210ENST00000561156 RXRBP28702 533 aa16.6■□□□□ 0.25
TNFAIP2-210ENST00000561156 SRPK2P78362 688 aaKnown RBP16.6■□□□□ 0.25
TNFAIP2-210ENST00000561156 CLSPNQ9HAW4 1339 aa16.6■□□□□ 0.25
TNFAIP2-210ENST00000561156 LMOD2Q6P5Q4 547 aa16.59■□□□□ 0.25
TNFAIP2-210ENST00000561156 CARD11Q9BXL7 1154 aa16.59■□□□□ 0.25
TNFAIP2-210ENST00000561156 USP21Q9UK80 565 aa16.59■□□□□ 0.25
TNFAIP2-210ENST00000561156 ACEP12821 1306 aa16.59■□□□□ 0.25
TNFAIP2-210ENST00000561156 EVC2Q86UK5 1308 aa16.59■□□□□ 0.25
TNFAIP2-210ENST00000561156 RGS12O14924 1447 aa16.59■□□□□ 0.25
TNFAIP2-210ENST00000561156 PCGF6Q9BYE7 350 aa16.58■□□□□ 0.24
TNFAIP2-210ENST00000561156 QTRT2Q9H974 415 aaKnown RBP16.58■□□□□ 0.24
TNFAIP2-210ENST00000561156 CABP2Q9NPB3 220 aa16.58■□□□□ 0.24
TNFAIP2-210ENST00000561156 PIK3C2AO00443 1686 aa16.58■□□□□ 0.24
TNFAIP2-210ENST00000561156 GLI3P10071 1580 aa16.57■□□□□ 0.24
TNFAIP2-210ENST00000561156 HAP1P54257 671 aaPredicted RBP16.57■□□□□ 0.24
TNFAIP2-210ENST00000561156 RBM6P78332 1123 aaKnown RBP16.57■□□□□ 0.24
TNFAIP2-210ENST00000561156 CABLES1Q8TDN4 633 aa16.57■□□□□ 0.24
TNFAIP2-210ENST00000561156 TRPC5Q9UL62 973 aaPredicted RBP16.57■□□□□ 0.24
TNFAIP2-210ENST00000561156 BRWD3Q6RI45 1802 aa16.56■□□□□ 0.24
TNFAIP2-210ENST00000561156 BRD4O60885 1362 aaPredicted RBP16.56■□□□□ 0.24
TNFAIP2-210ENST00000561156 USP6P35125 1406 aa16.55■□□□□ 0.24
TNFAIP2-210ENST00000561156 ATAD2Q6PL18 1390 aa16.54■□□□□ 0.24
TNFAIP2-210ENST00000561156 USP54Q70EL1 1684 aa16.54■□□□□ 0.24
TNFAIP2-210ENST00000561156 PAK3O75914 559 aaPredicted RBP16.54■□□□□ 0.24
TNFAIP2-210ENST00000561156 PLEKHG5O94827 1062 aa16.52■□□□□ 0.24
TNFAIP2-210ENST00000561156 UNC5CLQ8IV45 518 aa16.52■□□□□ 0.24
TNFAIP2-210ENST00000561156 LMO7Q8WWI1 1683 aa16.52■□□□□ 0.23
TNFAIP2-210ENST00000561156 SLIT3O75094 1523 aa16.51■□□□□ 0.23
TNFAIP2-210ENST00000561156 CABP1Q9NZU7 370 aa16.51■□□□□ 0.23
TNFAIP2-210ENST00000561156 TIMELESSQ9UNS1 1208 aa16.51■□□□□ 0.23
TNFAIP2-210ENST00000561156 SSH2Q76I76 1423 aa16.51■□□□□ 0.23
TNFAIP2-210ENST00000561156 CPSF1Q10570 1443 aaKnown RBP16.5■□□□□ 0.23
TNFAIP2-210ENST00000561156 USP19O94966 1318 aa16.49■□□□□ 0.23
TNFAIP2-210ENST00000561156 FAM83GA6ND36 823 aa16.48■□□□□ 0.23
TNFAIP2-210ENST00000561156 GJD4Q96KN9 370 aaPredicted RBP16.48■□□□□ 0.23
TNFAIP2-210ENST00000561156 CD163L1Q9NR16 1453 aa16.48■□□□□ 0.23
TNFAIP2-210ENST00000561156 ABTB2Q8N961 1025 aa16.47■□□□□ 0.23
TNFAIP2-210ENST00000561156 COL18A1P39060 1754 aa16.46■□□□□ 0.23
TNFAIP2-210ENST00000561156 RGPD5Q99666 1765 aa16.46■□□□□ 0.23
TNFAIP2-210ENST00000561156 VPS72Q15906 364 aa16.46■□□□□ 0.23
TNFAIP2-210ENST00000561156 KIAA0232Q92628 1395 aa16.46■□□□□ 0.23
TNFAIP2-210ENST00000561156 USP47Q96K76 1375 aa16.46■□□□□ 0.23
TNFAIP2-210ENST00000561156 NUTM2GQ5VZR2 741 aa16.45■□□□□ 0.22
TNFAIP2-210ENST00000561156 TESK2Q96S53 571 aa16.45■□□□□ 0.22
TNFAIP2-210ENST00000561156 CPDO75976 1380 aa16.45■□□□□ 0.22
TNFAIP2-210ENST00000561156 THSD7AQ9UPZ6 1657 aa16.45■□□□□ 0.22
TNFAIP2-210ENST00000561156 LTN1O94822 1766 aa16.45■□□□□ 0.22
TNFAIP2-210ENST00000561156 WNK3Q9BYP7 1800 aa16.45■□□□□ 0.22
TNFAIP2-210ENST00000561156 MYOM1P52179 1685 aa16.44■□□□□ 0.22
TNFAIP2-210ENST00000561156 ST20-MTHFSA0A0A6YYL1 179 aa16.44■□□□□ 0.22
TNFAIP2-210ENST00000561156 NLRP13Q86W25 1043 aa16.44■□□□□ 0.22
TNFAIP2-210ENST00000561156 PUS7Q96PZ0 661 aaKnown RBP16.44■□□□□ 0.22
TNFAIP2-210ENST00000561156 ZNF692Q9BU19 519 aaPredicted RBP16.44■□□□□ 0.22
TNFAIP2-210ENST00000561156 PRDM11Q9NQV5 511 aa16.44■□□□□ 0.22
TNFAIP2-210ENST00000561156 KTN1Q86UP2 1357 aaKnown RBP16.43■□□□□ 0.22
TNFAIP2-210ENST00000561156 BTG4Q9NY30 223 aa16.43■□□□□ 0.22
TNFAIP2-210ENST00000561156 EP400Q96L91 3159 aa16.43■□□□□ 0.22
TNFAIP2-210ENST00000561156 TTC21AQ8NDW8 1320 aa16.43■□□□□ 0.22
TNFAIP2-210ENST00000561156 NINLQ9Y2I6 1382 aa16.42■□□□□ 0.22
TNFAIP2-210ENST00000561156 SLC24A1O60721 1099 aa16.42■□□□□ 0.22
TNFAIP2-210ENST00000561156 CAMTA1Q9Y6Y1 1673 aa16.42■□□□□ 0.22
TNFAIP2-210ENST00000561156 TTC21BQ7Z4L5 1316 aa16.42■□□□□ 0.22
TNFAIP2-210ENST00000561156 NFAT5O94916 1531 aa16.41■□□□□ 0.22
TNFAIP2-210ENST00000561156 CCER1Q8TC90 406 aaPredicted RBP16.41■□□□□ 0.22
TNFAIP2-210ENST00000561156 UPF1Q92900 1129 aaKnown RBP eCLIP16.41■□□□□ 0.22
TNFAIP2-210ENST00000561156 KIF20BQ96Q89 1820 aa16.4■□□□□ 0.22
TNFAIP2-210ENST00000561156 ABCC6O95255 1503 aa16.4■□□□□ 0.22
TNFAIP2-210ENST00000561156 A0A1W2PP64 1363 aa16.39■□□□□ 0.21
TNFAIP2-210ENST00000561156 EDC4Q6P2E9 1401 aaKnown RBP16.39■□□□□ 0.21
TNFAIP2-210ENST00000561156 GCP02774 474 aa16.39■□□□□ 0.21
TNFAIP2-210ENST00000561156 NLRP6P59044 892 aa16.39■□□□□ 0.21
TNFAIP2-210ENST00000561156 ZC3H6P61129 1189 aaKnown RBP16.39■□□□□ 0.21
TNFAIP2-210ENST00000561156 CHRNA2Q15822 529 aa16.38■□□□□ 0.21
TNFAIP2-210ENST00000561156 CCDC9Q9Y3X0 531 aaKnown RBP16.38■□□□□ 0.21
TNFAIP2-210ENST00000561156 PARP4Q9UKK3 1724 aaKnown RBP16.38■□□□□ 0.21
TNFAIP2-210ENST00000561156 SPATA31A5Q5VU36 1347 aa16.38■□□□□ 0.21
TNFAIP2-210ENST00000561156 SPATA31A7Q8IWB4 1347 aa16.38■□□□□ 0.21
TNFAIP2-210ENST00000561156 COL5A2P05997 1499 aaPredicted RBP16.37■□□□□ 0.21
TNFAIP2-210ENST00000561156 ONECUT3O60422 494 aaPredicted RBP16.37■□□□□ 0.21
TNFAIP2-210ENST00000561156 TMC1Q8TDI8 760 aa16.37■□□□□ 0.21
TNFAIP2-210ENST00000561156 USP31Q70CQ4 1352 aa16.37■□□□□ 0.21
TNFAIP2-210ENST00000561156 HDGFL2Q7Z4V5 671 aaPredicted RBP16.36■□□□□ 0.21
TNFAIP2-210ENST00000561156 SLC12A5Q9H2X9 1139 aa16.36■□□□□ 0.21
TNFAIP2-210ENST00000561156 TMF1P82094 1093 aa16.35■□□□□ 0.21
TNFAIP2-210ENST00000561156 TERF2IPQ9NYB0 399 aa16.35■□□□□ 0.21
TNFAIP2-210ENST00000561156 RGPD1P0DJD0 1748 aa16.35■□□□□ 0.21
TNFAIP2-210ENST00000561156 AATKQ6ZMQ8 1374 aa16.35■□□□□ 0.21
TNFAIP2-210ENST00000561156 SEPT12Q8IYM1 358 aa16.34■□□□□ 0.21
TNFAIP2-210ENST00000561156 SPATA31A1Q5TZJ5 1347 aa16.34■□□□□ 0.21
TNFAIP2-210ENST00000561156 OVOS2A0A0J9YW53 1432 aa16.34■□□□□ 0.21
TNFAIP2-210ENST00000561156 OVOS2Q6IE36 1432 aa16.34■□□□□ 0.21
TNFAIP2-210ENST00000561156 KCNH5Q8NCM2 988 aa16.33■□□□□ 0.2
TNFAIP2-210ENST00000561156 STRN4Q9NRL3 753 aa16.33■□□□□ 0.2
TNFAIP2-210ENST00000561156 ANKRD36BQ8N2N9 1353 aa16.33■□□□□ 0.2
TNFAIP2-210ENST00000561156 FAM98CQ17RN3 349 aaKnown RBP16.32■□□□□ 0.2
TNFAIP2-210ENST00000561156 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.32■□□□□ 0.2
TNFAIP2-210ENST00000561156 TNS1Q9HBL0 1735 aaKnown RBP16.32■□□□□ 0.2
TNFAIP2-210ENST00000561156 FAM208AQ9UK61 1670 aaKnown RBP16.32■□□□□ 0.2
TNFAIP2-210ENST00000561156 LRRC37A3O60309 1634 aa16.31■□□□□ 0.2
TNFAIP2-210ENST00000561156 CRB1P82279 1406 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms