RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 BRINP3Q76B58 766 aa14.21□□□□□ -0.13
TPM1-221ENST00000559831 TRPM3Q9HCF6 1732 aaPredicted RBP14.21□□□□□ -0.14
TPM1-221ENST00000559831 PAK3O75914 559 aaPredicted RBP14.2□□□□□ -0.14
TPM1-221ENST00000559831 CERKQ8TCT0 537 aa14.2□□□□□ -0.14
TPM1-221ENST00000559831 DDX17Q92841 729 aaKnown RBP14.2□□□□□ -0.14
TPM1-221ENST00000559831 GGNBP2Q9H3C7 697 aa14.2□□□□□ -0.14
TPM1-221ENST00000559831 PRKRIP1Q9H875 184 aaPredicted RBP14.2□□□□□ -0.14
TPM1-221ENST00000559831 NSD2O96028 1365 aa14.2□□□□□ -0.14
TPM1-221ENST00000559831 NPC1L1Q9UHC9 1359 aa14.2□□□□□ -0.14
TPM1-221ENST00000559831 PIK3C2AO00443 1686 aa14.2□□□□□ -0.14
TPM1-221ENST00000559831 NHSL1Q5SYE7 1610 aa14.19□□□□□ -0.14
TPM1-221ENST00000559831 SSH2Q76I76 1423 aa14.19□□□□□ -0.14
TPM1-221ENST00000559831 KRT28Q7Z3Y7 464 aa14.19□□□□□ -0.14
TPM1-221ENST00000559831 NME9Q86XW9 330 aa14.19□□□□□ -0.14
TPM1-221ENST00000559831 NPHP3Q7Z494 1330 aa14.18□□□□□ -0.14
TPM1-221ENST00000559831 TTC21AQ8NDW8 1320 aa14.18□□□□□ -0.14
TPM1-221ENST00000559831 UBAP1LF5GYI3 381 aa14.18□□□□□ -0.14
TPM1-221ENST00000559831 FYB1O15117 783 aa14.18□□□□□ -0.14
TPM1-221ENST00000559831 TOM1O60784 492 aa14.18□□□□□ -0.14
TPM1-221ENST00000559831 RALBP1Q15311 655 aa14.18□□□□□ -0.14
TPM1-221ENST00000559831 MORC1Q86VD1 984 aa14.18□□□□□ -0.14
TPM1-221ENST00000559831 PARD3Q8TEW0 1356 aa14.18□□□□□ -0.14
TPM1-221ENST00000559831 SCAF1Q9H7N4 1312 aaKnown RBP14.17□□□□□ -0.14
TPM1-221ENST00000559831 ZRANB1Q9UGI0 708 aa14.17□□□□□ -0.14
TPM1-221ENST00000559831 BRD4O60885 1362 aaPredicted RBP14.17□□□□□ -0.14
TPM1-221ENST00000559831 MARF1Q9Y4F3 1742 aaKnown RBP14.16□□□□□ -0.14
TPM1-221ENST00000559831 TNNT2P45379 298 aaPredicted RBP14.16□□□□□ -0.14
TPM1-221ENST00000559831 PIP4K2BP78356 416 aa14.16□□□□□ -0.14
TPM1-221ENST00000559831 LMOD2Q6P5Q4 547 aa14.16□□□□□ -0.14
TPM1-221ENST00000559831 PXDNQ92626 1479 aa14.16□□□□□ -0.14
TPM1-221ENST00000559831 ALS2Q96Q42 1657 aa14.16□□□□□ -0.14
TPM1-221ENST00000559831 USP54Q70EL1 1684 aa14.15□□□□□ -0.14
TPM1-221ENST00000559831 NUTM2GQ5VZR2 741 aa14.15□□□□□ -0.14
TPM1-221ENST00000559831 ABTB2Q8N961 1025 aa14.15□□□□□ -0.14
TPM1-221ENST00000559831 COG3Q96JB2 828 aa14.15□□□□□ -0.14
TPM1-221ENST00000559831 MAP2P11137 1827 aaKnown RBP14.14□□□□□ -0.15
TPM1-221ENST00000559831 PHLPP1O60346 1717 aa14.14□□□□□ -0.15
TPM1-221ENST00000559831 MYBBP1AQ9BQG0 1328 aaKnown RBP14.14□□□□□ -0.15
TPM1-221ENST00000559831 AHDC1Q5TGY3 1603 aaPredicted RBP14.13□□□□□ -0.15
TPM1-221ENST00000559831 NLRP6P59044 892 aa14.13□□□□□ -0.15
TPM1-221ENST00000559831 OVOS2A0A0J9YW53 1432 aa14.13□□□□□ -0.15
TPM1-221ENST00000559831 TNS3Q68CZ2 1445 aa14.13□□□□□ -0.15
TPM1-221ENST00000559831 OVOS2Q6IE36 1432 aa14.13□□□□□ -0.15
TPM1-221ENST00000559831 SBNO1A3KN83 1393 aa14.12□□□□□ -0.15
TPM1-221ENST00000559831 PLEKHG5O94827 1062 aa14.12□□□□□ -0.15
TPM1-221ENST00000559831 USP31Q70CQ4 1352 aa14.11□□□□□ -0.15
TPM1-221ENST00000559831 SOX12O15370 315 aa14.11□□□□□ -0.15
TPM1-221ENST00000559831 PPP2R1AP30153 589 aa14.11□□□□□ -0.15
TPM1-221ENST00000559831 SOS2Q07890 1332 aaPredicted RBP14.11□□□□□ -0.15
TPM1-221ENST00000559831 FBXO41Q8TF61 875 aa14.1□□□□□ -0.15
TPM1-221ENST00000559831 SPATA31A3Q5VYP0 1347 aa14.1□□□□□ -0.15
TPM1-221ENST00000559831 CCER2I3L3R5 266 aa14.09□□□□□ -0.15
TPM1-221ENST00000559831 NLRP13Q86W25 1043 aa14.09□□□□□ -0.15
TPM1-221ENST00000559831 LTN1O94822 1766 aa14.09□□□□□ -0.15
TPM1-221ENST00000559831 PHRF1Q9P1Y6 1649 aaKnown RBP14.08□□□□□ -0.15
TPM1-221ENST00000559831 FBLN1P23142 703 aa14.08□□□□□ -0.16
TPM1-221ENST00000559831 CCDC184Q52MB2 194 aa14.08□□□□□ -0.16
TPM1-221ENST00000559831 MRS2Q9HD23 443 aa14.08□□□□□ -0.16
TPM1-221ENST00000559831 ARHGEF10O15013 1369 aa14.08□□□□□ -0.16
TPM1-221ENST00000559831 COL16A1Q07092 1604 aaPredicted RBP14.08□□□□□ -0.16
TPM1-221ENST00000559831 CRYBG1Q9Y4K1 1723 aa14.07□□□□□ -0.16
TPM1-221ENST00000559831 ABCA3Q99758 1704 aa14.07□□□□□ -0.16
TPM1-221ENST00000559831 SLIT3O75094 1523 aa14.06□□□□□ -0.16
TPM1-221ENST00000559831 MED1Q15648 1581 aaPredicted RBP14.06□□□□□ -0.16
TPM1-221ENST00000559831 PPM1GO15355 546 aaPredicted RBP14.05□□□□□ -0.16
TPM1-221ENST00000559831 MTHFSP49914 203 aa14.05□□□□□ -0.16
TPM1-221ENST00000559831 RRS1Q15050 365 aaKnown RBP14.05□□□□□ -0.16
TPM1-221ENST00000559831 AATKQ6ZMQ8 1374 aa14.05□□□□□ -0.16
TPM1-221ENST00000559831 NFAT5O94916 1531 aa14.05□□□□□ -0.16
TPM1-221ENST00000559831 PEAK1Q9H792 1746 aa14.04□□□□□ -0.16
TPM1-221ENST00000559831 ZBTB7CA1YPR0 619 aa14.04□□□□□ -0.16
TPM1-221ENST00000559831 CABLES1Q8TDN4 633 aa14.04□□□□□ -0.16
TPM1-221ENST00000559831 LRRC59Q96AG4 307 aaKnown RBP14.04□□□□□ -0.16
TPM1-221ENST00000559831 EMILIN1Q9Y6C2 1016 aa14.04□□□□□ -0.16
TPM1-221ENST00000559831 USP19O94966 1318 aa14.04□□□□□ -0.16
TPM1-221ENST00000559831 KCNH5Q8NCM2 988 aa14.03□□□□□ -0.16
TPM1-221ENST00000559831 POLKQ9UBT6 870 aa14.03□□□□□ -0.16
TPM1-221ENST00000559831 COL22A1Q8NFW1 1626 aaPredicted RBP14.02□□□□□ -0.16
TPM1-221ENST00000559831 HAP1P54257 671 aaPredicted RBP14.02□□□□□ -0.17
TPM1-221ENST00000559831 CFAP53Q96M91 514 aa14.02□□□□□ -0.17
TPM1-221ENST00000559831 CDK12Q9NYV4 1490 aaPredicted RBP14.01□□□□□ -0.17
TPM1-221ENST00000559831 SMG6Q86US8 1419 aaKnown RBP14.01□□□□□ -0.17
TPM1-221ENST00000559831 GCP02774 474 aa14.01□□□□□ -0.17
TPM1-221ENST00000559831 SHPRHQ149N8 1683 aa14.01□□□□□ -0.17
TPM1-221ENST00000559831 PNPLA6Q8IY17 1366 aa14□□□□□ -0.17
TPM1-221ENST00000559831 MAP3K19Q56UN5 1328 aa14□□□□□ -0.17
TPM1-221ENST00000559831 AMPHP49418 695 aa14□□□□□ -0.17
TPM1-221ENST00000559831 RGPD5Q99666 1765 aa14□□□□□ -0.17
TPM1-221ENST00000559831 ZC3H6P61129 1189 aaKnown RBP13.99□□□□□ -0.17
TPM1-221ENST00000559831 FAM9BQ8IZU0 186 aa13.99□□□□□ -0.17
TPM1-221ENST00000559831 COL3A1P02461 1466 aaPredicted RBP13.99□□□□□ -0.17
TPM1-221ENST00000559831 FLT4P35916 1363 aa13.97□□□□□ -0.17
TPM1-221ENST00000559831 RTL1A6NKG5 1358 aa13.96□□□□□ -0.17
TPM1-221ENST00000559831 DIAPH1O60610 1272 aaKnown RBP13.96□□□□□ -0.17
TPM1-221ENST00000559831 HOXC9P31274 260 aa13.96□□□□□ -0.17
TPM1-221ENST00000559831 HSPA1LP34931 641 aa13.96□□□□□ -0.17
TPM1-221ENST00000559831 WDR43Q15061 677 aaKnown RBP eCLIP13.96□□□□□ -0.17
TPM1-221ENST00000559831 ARHGEF25Q86VW2 580 aa13.96□□□□□ -0.17
TPM1-221ENST00000559831 PNISRQ8TF01 805 aaKnown RBP13.96□□□□□ -0.17
TPM1-221ENST00000559831 COL18A1P39060 1754 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms