RNA–Protein interactions for RNA: ENST00000559328.5

MARK3-219, Transcript of microtubule affinity regulating kinase 3, human

TSL 4

Gene MARK3, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-219	ENST00000559328	SHPRH	Q149N8	1683 aa		28.45	■■■□□ 2.15
MARK3-219	ENST00000559328	ANKRD36B	Q8N2N9	1353 aa		28.45	■■■□□ 2.14
MARK3-219	ENST00000559328	TNS3	Q68CZ2	1445 aa		28.44	■■■□□ 2.14
MARK3-219	ENST00000559328	SPATA31A3	Q5VYP0	1347 aa		28.43	■■■□□ 2.14
MARK3-219	ENST00000559328	PAK3	O75914	559 aa	Predicted RBP	28.43	■■■□□ 2.14
MARK3-219	ENST00000559328	BRD4	O60885	1362 aa	Predicted RBP	28.42	■■■□□ 2.14
MARK3-219	ENST00000559328	JCAD	Q9P266	1359 aa		28.41	■■■□□ 2.14
MARK3-219	ENST00000559328	SSH2	Q76I76	1423 aa		28.41	■■■□□ 2.14
MARK3-219	ENST00000559328	PNPLA6	Q8IY17	1366 aa		28.39	■■■□□ 2.14
MARK3-219	ENST00000559328	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.39	■■■□□ 2.13
MARK3-219	ENST00000559328	EDC4	Q6P2E9	1401 aa	Known RBP	28.38	■■■□□ 2.13
MARK3-219	ENST00000559328	LMOD2	Q6P5Q4	547 aa		28.38	■■■□□ 2.13
MARK3-219	ENST00000559328	TTC21B	Q7Z4L5	1316 aa		28.37	■■■□□ 2.13
MARK3-219	ENST00000559328	ARHGEF10	O15013	1369 aa		28.37	■■■□□ 2.13
MARK3-219	ENST00000559328	PIK3C2A	O00443	1686 aa		28.36	■■■□□ 2.13
MARK3-219	ENST00000559328	TTC21A	Q8NDW8	1320 aa		28.34	■■■□□ 2.13
MARK3-219	ENST00000559328	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	28.33	■■■□□ 2.13	6e-6	■□□□□ 8.8
MARK3-219	ENST00000559328	ABTB2	Q8N961	1025 aa		28.33	■■■□□ 2.13
MARK3-219	ENST00000559328	PANK3	Q9H999	370 aa		28.33	■■■□□ 2.13
MARK3-219	ENST00000559328	CARD14	Q9BXL6	1004 aa		28.32	■■■□□ 2.12
MARK3-219	ENST00000559328	ABCA3	Q99758	1704 aa		28.32	■■■□□ 2.12
MARK3-219	ENST00000559328	CRYBG1	Q9Y4K1	1723 aa		28.31	■■■□□ 2.12
MARK3-219	ENST00000559328	KIF20B	Q96Q89	1820 aa		28.31	■■■□□ 2.12
MARK3-219	ENST00000559328	NSD3	Q9BZ95	1437 aa		28.3	■■■□□ 2.12
MARK3-219	ENST00000559328	NUTM2G	Q5VZR2	741 aa		28.3	■■■□□ 2.12
MARK3-219	ENST00000559328	MARF1	Q9Y4F3	1742 aa	Known RBP	28.29	■■■□□ 2.12
MARK3-219	ENST00000559328	MED1	Q15648	1581 aa	Predicted RBP	28.29	■■■□□ 2.12
MARK3-219	ENST00000559328	SPATA31A6	Q5VVP1	1343 aa		28.28	■■■□□ 2.12
MARK3-219	ENST00000559328	USP54	Q70EL1	1684 aa		28.27	■■■□□ 2.12
MARK3-219	ENST00000559328	PLEKHG5	O94827	1062 aa		28.27	■■■□□ 2.12
MARK3-219	ENST00000559328	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.27	■■■□□ 2.12
MARK3-219	ENST00000559328	ZNF316	A6NFI3	1004 aa	Predicted RBP	28.26	■■■□□ 2.11
MARK3-219	ENST00000559328	NME9	Q86XW9	330 aa		28.26	■■■□□ 2.11
MARK3-219	ENST00000559328	NLRP6	P59044	892 aa		28.25	■■■□□ 2.11
MARK3-219	ENST00000559328	NLRP13	Q86W25	1043 aa		28.25	■■■□□ 2.11
MARK3-219	ENST00000559328	CABLES1	Q8TDN4	633 aa		28.24	■■■□□ 2.11
MARK3-219	ENST00000559328	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.23	■■■□□ 2.11
MARK3-219	ENST00000559328	NUTM2E	B1AL46	878 aa	Predicted RBP	28.23	■■■□□ 2.11
MARK3-219	ENST00000559328	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.23	■■■□□ 2.11
MARK3-219	ENST00000559328	USP31	Q70CQ4	1352 aa		28.23	■■■□□ 2.11
MARK3-219	ENST00000559328	ZRANB1	Q9UGI0	708 aa		28.22	■■■□□ 2.11
MARK3-219	ENST00000559328	LRP6	O75581	1613 aa		28.21	■■■□□ 2.11
MARK3-219	ENST00000559328	USP19	O94966	1318 aa		28.2	■■■□□ 2.11
MARK3-219	ENST00000559328	FYB1	O15117	783 aa		28.2	■■■□□ 2.1
MARK3-219	ENST00000559328	HAP1	P54257	671 aa	Predicted RBP	28.2	■■■□□ 2.1
MARK3-219	ENST00000559328	ANKRD26	Q9UPS8	1709 aa		28.2	■■■□□ 2.1
MARK3-219	ENST00000559328	CGNL1	Q0VF96	1302 aa		28.19	■■■□□ 2.1
MARK3-219	ENST00000559328	SLIT3	O75094	1523 aa		28.19	■■■□□ 2.1
MARK3-219	ENST00000559328	KNSTRN	Q9Y448	316 aa		28.18	■■■□□ 2.1
MARK3-219	ENST00000559328	OVOS2	A0A0J9YW53	1432 aa		28.18	■■■□□ 2.1
MARK3-219	ENST00000559328	OVOS2	Q6IE36	1432 aa		28.18	■■■□□ 2.1
MARK3-219	ENST00000559328	GGNBP2	Q9H3C7	697 aa		28.17	■■■□□ 2.1
MARK3-219	ENST00000559328	PER1	O15534	1290 aa	Predicted RBP	28.16	■■■□□ 2.1
MARK3-219	ENST00000559328	COG3	Q96JB2	828 aa		28.15	■■■□□ 2.1
MARK3-219	ENST00000559328	ADAMTS2	O95450	1211 aa		28.14	■■■□□ 2.1
MARK3-219	ENST00000559328	DDX10	Q13206	875 aa	Known RBP	28.14	■■■□□ 2.1
MARK3-219	ENST00000559328	GC	P02774	474 aa		28.13	■■■□□ 2.09
MARK3-219	ENST00000559328	MEX3C	Q5U5Q3	659 aa	Known RBP	28.11	■■■□□ 2.09
MARK3-219	ENST00000559328	NSD2	O96028	1365 aa		28.11	■■■□□ 2.09
MARK3-219	ENST00000559328	NFAT5	O94916	1531 aa		28.1	■■■□□ 2.09
MARK3-219	ENST00000559328	AMER1	Q5JTC6	1135 aa	Predicted RBP	28.1	■■■□□ 2.09
MARK3-219	ENST00000559328	KCNH5	Q8NCM2	988 aa		28.1	■■■□□ 2.09
MARK3-219	ENST00000559328	SOX12	O15370	315 aa		28.09	■■■□□ 2.09
MARK3-219	ENST00000559328	LTN1	O94822	1766 aa		28.09	■■■□□ 2.09
MARK3-219	ENST00000559328	ZC3H6	P61129	1189 aa	Known RBP	28.08	■■■□□ 2.09
MARK3-219	ENST00000559328	KIAA0232	Q92628	1395 aa		28.06	■■■□□ 2.08
MARK3-219	ENST00000559328	COL14A1	Q05707	1796 aa	Known RBP	28.06	■■■□□ 2.08
MARK3-219	ENST00000559328	CPD	O75976	1380 aa		28.05	■■■□□ 2.08
MARK3-219	ENST00000559328	PLCH1	Q4KWH8	1693 aa		28.05	■■■□□ 2.08
MARK3-219	ENST00000559328	C8orf37	Q96NL8	207 aa		28.05	■■■□□ 2.08
MARK3-219	ENST00000559328	NPC1L1	Q9UHC9	1359 aa		28.04	■■■□□ 2.08
MARK3-219	ENST00000559328	MAP2	P11137	1827 aa	Known RBP	28.04	■■■□□ 2.08
MARK3-219	ENST00000559328	PRDM11	Q9NQV5	511 aa		28.03	■■■□□ 2.08
MARK3-219	ENST00000559328	FAM83G	A6ND36	823 aa		28.02	■■■□□ 2.08
MARK3-219	ENST00000559328	CC2D1B	Q5T0F9	858 aa	Known RBP	28.02	■■■□□ 2.08
MARK3-219	ENST00000559328	MORC1	Q86VD1	984 aa		28.01	■■■□□ 2.07
MARK3-219	ENST00000559328	NGLY1	Q96IV0	654 aa		28.01	■■■□□ 2.07
MARK3-219	ENST00000559328	COL18A1	P39060	1754 aa		28.01	■■■□□ 2.07
MARK3-219	ENST00000559328	NWD2	Q9ULI1	1742 aa		28.01	■■■□□ 2.07
MARK3-219	ENST00000559328	ZBTB7C	A1YPR0	619 aa		28	■■■□□ 2.07
MARK3-219	ENST00000559328	FBLN1	P23142	703 aa		28	■■■□□ 2.07
MARK3-219	ENST00000559328	CNGB1	Q14028	1251 aa	Predicted RBP	28	■■■□□ 2.07
MARK3-219	ENST00000559328	CHRNA2	Q15822	529 aa		28	■■■□□ 2.07
MARK3-219	ENST00000559328	ARHGEF25	Q86VW2	580 aa		28	■■■□□ 2.07
MARK3-219	ENST00000559328	RGPD5	Q99666	1765 aa		28	■■■□□ 2.07
MARK3-219	ENST00000559328	LMO7	Q8WWI1	1683 aa		27.99	■■■□□ 2.07
MARK3-219	ENST00000559328	SLIT2	O94813	1529 aa		27.97	■■■□□ 2.07
MARK3-219	ENST00000559328	AFF2	P51816	1311 aa		27.96	■■■□□ 2.07
MARK3-219	ENST00000559328	TNNT2	P45379	298 aa	Predicted RBP	27.96	■■■□□ 2.07
MARK3-219	ENST00000559328	NRAP	Q86VF7	1730 aa		27.95	■■■□□ 2.07
MARK3-219	ENST00000559328	FNBP4	Q8N3X1	1017 aa	Predicted RBP	27.95	■■■□□ 2.06
MARK3-219	ENST00000559328	AATK	Q6ZMQ8	1374 aa		27.95	■■■□□ 2.06
MARK3-219	ENST00000559328	MAP3K19	Q56UN5	1328 aa		27.94	■■■□□ 2.06
MARK3-219	ENST00000559328	RRS1	Q15050	365 aa	Known RBP	27.94	■■■□□ 2.06
MARK3-219	ENST00000559328	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.94	■■■□□ 2.06
MARK3-219	ENST00000559328	ABCC6	O95255	1503 aa		27.93	■■■□□ 2.06
MARK3-219	ENST00000559328	PHF23	Q9BUL5	403 aa	Predicted RBP	27.93	■■■□□ 2.06
MARK3-219	ENST00000559328	CAMTA1	Q9Y6Y1	1673 aa		27.93	■■■□□ 2.06
MARK3-219	ENST00000559328	BTG4	Q9NY30	223 aa		27.92	■■■□□ 2.06
MARK3-219	ENST00000559328	PEAK1	Q9H792	1746 aa		27.92	■■■□□ 2.06

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