RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 PAXIP1Q6ZW49 1069 aaPredicted RBP10.35□□□□□ -0.75
SPG11-204ENST00000557866 ANO8Q9HCE9 1232 aaPredicted RBP10.35□□□□□ -0.75
SPG11-204ENST00000557866 AXIN2Q9Y2T1 843 aa10.35□□□□□ -0.75
SPG11-204ENST00000557866 NOS1P29475 1434 aa10.34□□□□□ -0.75
SPG11-204ENST00000557866 AGLP35573 1532 aa10.34□□□□□ -0.75
SPG11-204ENST00000557866 CFAP44Q96MT7 982 aa10.34□□□□□ -0.75
SPG11-204ENST00000557866 CARD11Q9BXL7 1154 aa10.34□□□□□ -0.75
SPG11-204ENST00000557866 REREQ9P2R6 1566 aa10.34□□□□□ -0.75
SPG11-204ENST00000557866 ARHGAP31Q2M1Z3 1444 aa10.33□□□□□ -0.76
SPG11-204ENST00000557866 CEP152O94986 1710 aa10.33□□□□□ -0.76
SPG11-204ENST00000557866 SPHKAPQ2M3C7 1700 aa10.33□□□□□ -0.76
SPG11-204ENST00000557866 EVI5O60447 810 aa10.33□□□□□ -0.76
SPG11-204ENST00000557866 GPRASP1Q5JY77 1395 aa10.33□□□□□ -0.76
SPG11-204ENST00000557866 CCDC7Q96M83 1385 aa10.33□□□□□ -0.76
SPG11-204ENST00000557866 CNTLNQ9NXG0 1405 aa10.33□□□□□ -0.76
SPG11-204ENST00000557866 ROCK2O75116 1388 aaKnown RBP10.32□□□□□ -0.76
SPG11-204ENST00000557866 EMILIN3Q9NT22 766 aa10.32□□□□□ -0.76
SPG11-204ENST00000557866 KIF7Q2M1P5 1343 aa10.32□□□□□ -0.76
SPG11-204ENST00000557866 NEURL4Q96JN8 1562 aa10.31□□□□□ -0.76
SPG11-204ENST00000557866 ZNF454Q8N9F8 522 aa10.31□□□□□ -0.76
SPG11-204ENST00000557866 RNF166Q96A37 237 aaPredicted RBP10.31□□□□□ -0.76
SPG11-204ENST00000557866 STAC3Q96MF2 364 aa10.31□□□□□ -0.76
SPG11-204ENST00000557866 ARHGEF40Q8TER5 1519 aa10.31□□□□□ -0.76
SPG11-204ENST00000557866 ST20-MTHFSA0A0A6YYL1 179 aa10.3□□□□□ -0.76
SPG11-204ENST00000557866 CAMK2BQ13554 666 aa10.3□□□□□ -0.76
SPG11-204ENST00000557866 ADGRF5Q8IZF2 1346 aa10.3□□□□□ -0.76
SPG11-204ENST00000557866 SIGLEC1Q9BZZ2 1709 aa10.3□□□□□ -0.76
SPG11-204ENST00000557866 CAMSAP1Q5T5Y3 1602 aa10.29□□□□□ -0.76
SPG11-204ENST00000557866 FOSBP53539 338 aa10.29□□□□□ -0.76
SPG11-204ENST00000557866 IDI1Q13907 227 aa10.29□□□□□ -0.76
SPG11-204ENST00000557866 MLECQ14165 292 aa10.29□□□□□ -0.76
SPG11-204ENST00000557866 FBXO31Q5XUX0 539 aaPredicted RBP10.29□□□□□ -0.76
SPG11-204ENST00000557866 TRPM1Q7Z4N2 1603 aa10.29□□□□□ -0.76
SPG11-204ENST00000557866 ADGRB3O60242 1522 aa10.28□□□□□ -0.76
SPG11-204ENST00000557866 SYNMO15061 1565 aa10.28□□□□□ -0.76
SPG11-204ENST00000557866 MADDQ8WXG6 1647 aa10.27□□□□□ -0.77
SPG11-204ENST00000557866 TK2O00142 265 aa10.27□□□□□ -0.77
SPG11-204ENST00000557866 PSEN2P49810 448 aa10.27□□□□□ -0.77
SPG11-204ENST00000557866 MYOM2P54296 1465 aa10.27□□□□□ -0.77
SPG11-204ENST00000557866 ZC3H13Q5T200 1668 aaKnown RBP10.26□□□□□ -0.77
SPG11-204ENST00000557866 ERVK-7P63135 1459 aa10.26□□□□□ -0.77
SPG11-204ENST00000557866 NRXN1Q9ULB1 1477 aa10.26□□□□□ -0.77
SPG11-204ENST00000557866 CFAP70Q5T0N1 1121 aa10.26□□□□□ -0.77
SPG11-204ENST00000557866 ADGRD1Q6QNK2 874 aa10.26□□□□□ -0.77
SPG11-204ENST00000557866 TESK2Q96S53 571 aa10.26□□□□□ -0.77
SPG11-204ENST00000557866 BCL2L12Q9HB09 334 aa10.26□□□□□ -0.77
SPG11-204ENST00000557866 SLC52A1Q9NWF4 448 aa10.26□□□□□ -0.77
SPG11-204ENST00000557866 RPGRIP1LQ68CZ1 1315 aa10.25□□□□□ -0.77
SPG11-204ENST00000557866 DMRTA1Q5VZB9 504 aa10.24□□□□□ -0.77
SPG11-204ENST00000557866 ZDHHC16Q969W1 377 aa10.24□□□□□ -0.77
SPG11-204ENST00000557866 KCNK17Q96T54 332 aa10.24□□□□□ -0.77
SPG11-204ENST00000557866 PIK3C2BO00750 1634 aa10.24□□□□□ -0.77
SPG11-204ENST00000557866 ARID4BQ4LE39 1312 aaPredicted RBP10.24□□□□□ -0.77
SPG11-204ENST00000557866 MROH2AA6NES4 1674 aa10.24□□□□□ -0.77
SPG11-204ENST00000557866 LAMC1P11047 1609 aa10.23□□□□□ -0.77
SPG11-204ENST00000557866 ANP32CO43423 234 aa10.23□□□□□ -0.77
SPG11-204ENST00000557866 ZMYM3Q14202 1370 aa10.23□□□□□ -0.77
SPG11-204ENST00000557866 PTPREP23469 700 aa10.22□□□□□ -0.77
SPG11-204ENST00000557866 POLR3GLQ9BT43 218 aa10.22□□□□□ -0.77
SPG11-204ENST00000557866 C14orf93Q9H972 538 aaKnown RBP10.22□□□□□ -0.77
SPG11-204ENST00000557866 WDR70Q9NW82 654 aa10.22□□□□□ -0.77
SPG11-204ENST00000557866 PIK3C2GO75747 1445 aa10.22□□□□□ -0.77
SPG11-204ENST00000557866 DPYSL4O14531 572 aa10.21□□□□□ -0.77
SPG11-204ENST00000557866 NUTM2DQ5VT03 806 aaPredicted RBP10.21□□□□□ -0.77
SPG11-204ENST00000557866 YTHDC1Q96MU7 727 aaKnown RBP10.21□□□□□ -0.77
SPG11-204ENST00000557866 SCAF11Q99590 1463 aaKnown RBP10.21□□□□□ -0.78
SPG11-204ENST00000557866 CCER2I3L3R5 266 aa10.2□□□□□ -0.78
SPG11-204ENST00000557866 KIF1BO60333 1816 aa10.2□□□□□ -0.78
SPG11-204ENST00000557866 SPATA31D1Q6ZQQ2 1576 aa10.2□□□□□ -0.78
SPG11-204ENST00000557866 PREX1Q8TCU6 1659 aa10.2□□□□□ -0.78
SPG11-204ENST00000557866 DISP3Q9P2K9 1392 aa10.2□□□□□ -0.78
SPG11-204ENST00000557866 IFT172Q9UG01 1749 aa10.19□□□□□ -0.78
SPG11-204ENST00000557866 CLTCQ00610 1675 aaKnown RBP10.19□□□□□ -0.78
SPG11-204ENST00000557866 NEXMIFQ5QGS0 1516 aa10.19□□□□□ -0.78
SPG11-204ENST00000557866 HRO43593 1189 aa10.19□□□□□ -0.78
SPG11-204ENST00000557866 PHF14O94880 888 aa10.19□□□□□ -0.78
SPG11-204ENST00000557866 SLC4A5Q9BY07 1137 aa10.19□□□□□ -0.78
SPG11-204ENST00000557866 PCDHGA10Q9Y5H3 936 aa10.19□□□□□ -0.78
SPG11-204ENST00000557866 CFAP65Q6ZU64 1925 aaKnown RBP10.19□□□□□ -0.78
SPG11-204ENST00000557866 ZFYVE9O95405 1425 aa10.18□□□□□ -0.78
SPG11-204ENST00000557866 E2F4Q16254 413 aa10.18□□□□□ -0.78
SPG11-204ENST00000557866 FBXW7Q969H0 707 aa10.18□□□□□ -0.78
SPG11-204ENST00000557866 ADAM33Q9BZ11 813 aa10.18□□□□□ -0.78
SPG11-204ENST00000557866 ESF1Q9H501 851 aaKnown RBP10.18□□□□□ -0.78
SPG11-204ENST00000557866 TMEM131LA2VDJ0 1609 aa10.18□□□□□ -0.78
SPG11-204ENST00000557866 KIAA1210Q9ULL0 1709 aa10.17□□□□□ -0.78
SPG11-204ENST00000557866 TMEM132EQ6IEE7 984 aa10.17□□□□□ -0.78
SPG11-204ENST00000557866 TYW1BQ6NUM6 668 aa10.17□□□□□ -0.78
SPG11-204ENST00000557866 PRKRIP1Q9H875 184 aaPredicted RBP10.17□□□□□ -0.78
SPG11-204ENST00000557866 VPS9D1Q9Y2B5 631 aa10.17□□□□□ -0.78
SPG11-204ENST00000557866 ADGRB1O14514 1584 aa10.17□□□□□ -0.78
SPG11-204ENST00000557866 A2ML1A8K2U0 1454 aa10.17□□□□□ -0.78
SPG11-204ENST00000557866 PPLO60437 1756 aa10.16□□□□□ -0.78
SPG11-204ENST00000557866 TMF1P82094 1093 aa10.16□□□□□ -0.78
SPG11-204ENST00000557866 EPAS1Q99814 870 aa10.16□□□□□ -0.78
SPG11-204ENST00000557866 IQGAP1P46940 1657 aa10.15□□□□□ -0.78
SPG11-204ENST00000557866 TNRQ92752 1358 aa10.15□□□□□ -0.78
SPG11-204ENST00000557866 CEBPAP49715 358 aaPredicted RBP10.15□□□□□ -0.78
SPG11-204ENST00000557866 CCDC184Q52MB2 194 aa10.15□□□□□ -0.78
SPG11-204ENST00000557866 EIF3AQ14152 1382 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms