RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 GLI3P10071 1580 aa17.12■□□□□ 0.33
RCCD1-209ENST00000557750 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.11■□□□□ 0.33
RCCD1-209ENST00000557750 PHF8Q9UPP1 1060 aa17.1■□□□□ 0.33
RCCD1-209ENST00000557750 ATP7BP35670 1465 aa17.1■□□□□ 0.33
RCCD1-209ENST00000557750 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
RCCD1-209ENST00000557750 CCDC61Q9Y6R9 512 aa17.1■□□□□ 0.33
RCCD1-209ENST00000557750 CABLES1Q8TDN4 633 aa17.09■□□□□ 0.33
RCCD1-209ENST00000557750 KIF1AQ12756 1690 aa17.09■□□□□ 0.33
RCCD1-209ENST00000557750 PLEKHG5O94827 1062 aa17.08■□□□□ 0.32
RCCD1-209ENST00000557750 BLMP54132 1417 aaPredicted RBP17.08■□□□□ 0.32
RCCD1-209ENST00000557750 USP32Q8NFA0 1604 aa17.08■□□□□ 0.32
RCCD1-209ENST00000557750 HAP1P54257 671 aaPredicted RBP17.07■□□□□ 0.32
RCCD1-209ENST00000557750 DEFB132Q7Z7B7 95 aa17.07■□□□□ 0.32
RCCD1-209ENST00000557750 SEPT12Q8IYM1 358 aa17.07■□□□□ 0.32
RCCD1-209ENST00000557750 CDCA8Q53HL2 280 aa17.07■□□□□ 0.32
RCCD1-209ENST00000557750 TNS3Q68CZ2 1445 aa17.06■□□□□ 0.32
RCCD1-209ENST00000557750 PPIP5K1Q6PFW1 1433 aa17.06■□□□□ 0.32
RCCD1-209ENST00000557750 PSME1Q06323 249 aa17.06■□□□□ 0.32
RCCD1-209ENST00000557750 VPS72Q15906 364 aa17.06■□□□□ 0.32
RCCD1-209ENST00000557750 NGDNQ8NEJ9 315 aaKnown RBP17.06■□□□□ 0.32
RCCD1-209ENST00000557750 CABP1Q9NZU7 370 aa17.05■□□□□ 0.32
RCCD1-209ENST00000557750 BRWD3Q6RI45 1802 aa17.05■□□□□ 0.32
RCCD1-209ENST00000557750 TMC1Q8TDI8 760 aa17.04■□□□□ 0.32
RCCD1-209ENST00000557750 PUS7Q96PZ0 661 aaKnown RBP17.04■□□□□ 0.32
RCCD1-209ENST00000557750 POLR3GLQ9BT43 218 aa17.04■□□□□ 0.32
RCCD1-209ENST00000557750 ONECUT3O60422 494 aaPredicted RBP17.04■□□□□ 0.32
RCCD1-209ENST00000557750 LMOD2Q6P5Q4 547 aa17.04■□□□□ 0.32
RCCD1-209ENST00000557750 CCDC9Q9Y3X0 531 aaKnown RBP17.04■□□□□ 0.32
RCCD1-209ENST00000557750 RGPD8O14715 1765 aaPredicted RBP17.03■□□□□ 0.32
RCCD1-209ENST00000557750 SBNO1A3KN83 1393 aa17.03■□□□□ 0.32
RCCD1-209ENST00000557750 PLEKHG3A1L390 1219 aa17.03■□□□□ 0.32
RCCD1-209ENST00000557750 ACEP12821 1306 aa17.02■□□□□ 0.32
RCCD1-209ENST00000557750 SF3B2Q13435 895 aaKnown RBP17.02■□□□□ 0.32
RCCD1-209ENST00000557750 FAM83GA6ND36 823 aa17.01■□□□□ 0.31
RCCD1-209ENST00000557750 KRT27Q7Z3Y8 459 aa17.01■□□□□ 0.31
RCCD1-209ENST00000557750 ARHGEF10O15013 1369 aa17■□□□□ 0.31
RCCD1-209ENST00000557750 PLCH1Q4KWH8 1693 aa17■□□□□ 0.31
RCCD1-209ENST00000557750 SLC12A5Q9H2X9 1139 aa17■□□□□ 0.31
RCCD1-209ENST00000557750 ITSN1Q15811 1721 aa17■□□□□ 0.31
RCCD1-209ENST00000557750 TOPAZ1Q8N9V7 1692 aa16.99■□□□□ 0.31
RCCD1-209ENST00000557750 NWD2Q9ULI1 1742 aa16.99■□□□□ 0.31
RCCD1-209ENST00000557750 POLR3AO14802 1390 aaPredicted RBP16.99■□□□□ 0.31
RCCD1-209ENST00000557750 C11orf95C9JLR9 678 aaPredicted RBP16.98■□□□□ 0.31
RCCD1-209ENST00000557750 NINLQ9Y2I6 1382 aa16.98■□□□□ 0.31
RCCD1-209ENST00000557750 ABCA3Q99758 1704 aa16.97■□□□□ 0.31
RCCD1-209ENST00000557750 PAK3O75914 559 aaPredicted RBP16.97■□□□□ 0.31
RCCD1-209ENST00000557750 A0A0G2JS52 829 aa16.96■□□□□ 0.31
RCCD1-209ENST00000557750 MYT1Q01538 1121 aa16.96■□□□□ 0.31
RCCD1-209ENST00000557750 HDGFL2Q7Z4V5 671 aaPredicted RBP16.96■□□□□ 0.31
RCCD1-209ENST00000557750 TERF2IPQ9NYB0 399 aa16.96■□□□□ 0.31
RCCD1-209ENST00000557750 FAM98CQ17RN3 349 aaKnown RBP16.95■□□□□ 0.3
RCCD1-209ENST00000557750 ZNF692Q9BU19 519 aaPredicted RBP16.95■□□□□ 0.3
RCCD1-209ENST00000557750 BTG4Q9NY30 223 aa16.95■□□□□ 0.3
RCCD1-209ENST00000557750 KIF7Q2M1P5 1343 aa16.95■□□□□ 0.3
RCCD1-209ENST00000557750 KTN1Q86UP2 1357 aaKnown RBP16.93■□□□□ 0.3
RCCD1-209ENST00000557750 USP6P35125 1406 aa16.93■□□□□ 0.3
RCCD1-209ENST00000557750 PSDA5PKW4 1024 aaPredicted RBP16.93■□□□□ 0.3
RCCD1-209ENST00000557750 A0A1W2PP64 1363 aa16.93■□□□□ 0.3
RCCD1-209ENST00000557750 CPSF1Q10570 1443 aaKnown RBP16.92■□□□□ 0.3
RCCD1-209ENST00000557750 BAG6P46379 1132 aa16.92■□□□□ 0.3
RCCD1-209ENST00000557750 CD163L1Q9NR16 1453 aa16.92■□□□□ 0.3
RCCD1-209ENST00000557750 NRAPQ86VF7 1730 aa16.91■□□□□ 0.3
RCCD1-209ENST00000557750 TRPM3Q9HCF6 1732 aaPredicted RBP16.91■□□□□ 0.3
RCCD1-209ENST00000557750 ANKRD36BQ8N2N9 1353 aa16.91■□□□□ 0.3
RCCD1-209ENST00000557750 WASHC2AQ641Q2 1341 aa16.91■□□□□ 0.3
RCCD1-209ENST00000557750 CCDC7Q96M83 1385 aa16.9■□□□□ 0.3
RCCD1-209ENST00000557750 LRP5O75197 1615 aa16.9■□□□□ 0.3
RCCD1-209ENST00000557750 FAM182BQ5T319 152 aa16.9■□□□□ 0.3
RCCD1-209ENST00000557750 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.89■□□□□ 0.29
RCCD1-209ENST00000557750 ABTB2Q8N961 1025 aa16.89■□□□□ 0.29
RCCD1-209ENST00000557750 SPATA31A5Q5VU36 1347 aa16.89■□□□□ 0.29
RCCD1-209ENST00000557750 SPATA31A7Q8IWB4 1347 aa16.89■□□□□ 0.29
RCCD1-209ENST00000557750 BRD4O60885 1362 aaPredicted RBP16.89■□□□□ 0.29
RCCD1-209ENST00000557750 COL14A1Q05707 1796 aaKnown RBP16.88■□□□□ 0.29
RCCD1-209ENST00000557750 ALS2Q96Q42 1657 aa16.88■□□□□ 0.29
RCCD1-209ENST00000557750 TTC21BQ7Z4L5 1316 aa16.88■□□□□ 0.29
RCCD1-209ENST00000557750 EN1Q05925 392 aaPredicted RBP16.88■□□□□ 0.29
RCCD1-209ENST00000557750 NUTM2GQ5VZR2 741 aa16.88■□□□□ 0.29
RCCD1-209ENST00000557750 EDC4Q6P2E9 1401 aaKnown RBP16.87■□□□□ 0.29
RCCD1-209ENST00000557750 SSH2Q76I76 1423 aa16.87■□□□□ 0.29
RCCD1-209ENST00000557750 TTC21AQ8NDW8 1320 aa16.86■□□□□ 0.29
RCCD1-209ENST00000557750 PELP1Q8IZL8 1130 aaKnown RBP16.86■□□□□ 0.29
RCCD1-209ENST00000557750 PANK3Q9H999 370 aa16.86■□□□□ 0.29
RCCD1-209ENST00000557750 MYOM1P52179 1685 aa16.86■□□□□ 0.29
RCCD1-209ENST00000557750 PRDM11Q9NQV5 511 aa16.85■□□□□ 0.29
RCCD1-209ENST00000557750 AKAP12Q02952 1782 aa16.84■□□□□ 0.29
RCCD1-209ENST00000557750 NLRP6P59044 892 aa16.84■□□□□ 0.29
RCCD1-209ENST00000557750 CARD14Q9BXL6 1004 aa16.84■□□□□ 0.29
RCCD1-209ENST00000557750 R3HDM1Q15032 1099 aaKnown RBP16.83■□□□□ 0.28
RCCD1-209ENST00000557750 NLRP13Q86W25 1043 aa16.83■□□□□ 0.28
RCCD1-209ENST00000557750 NME9Q86XW9 330 aa16.83■□□□□ 0.28
RCCD1-209ENST00000557750 NSD3Q9BZ95 1437 aa16.83■□□□□ 0.28
RCCD1-209ENST00000557750 RGPD1P0DJD0 1748 aa16.83■□□□□ 0.28
RCCD1-209ENST00000557750 THSD7AQ9UPZ6 1657 aa16.83■□□□□ 0.28
RCCD1-209ENST00000557750 MON2Q7Z3U7 1717 aa16.82■□□□□ 0.28
RCCD1-209ENST00000557750 CRYBG1Q9Y4K1 1723 aa16.82■□□□□ 0.28
RCCD1-209ENST00000557750 SPATA31A1Q5TZJ5 1347 aa16.82■□□□□ 0.28
RCCD1-209ENST00000557750 NRKQ7Z2Y5 1582 aa16.82■□□□□ 0.28
RCCD1-209ENST00000557750 CHRNA2Q15822 529 aa16.81■□□□□ 0.28
RCCD1-209ENST00000557750 KIAA0232Q92628 1395 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms