RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 PLEKHH1Q9ULM0 1364 aa16.46■□□□□ 0.23
LINC00648-204ENST00000557749 ADGRB2O60241 1585 aa16.46■□□□□ 0.23
LINC00648-204ENST00000557749 AMER1Q5JTC6 1135 aaPredicted RBP16.45■□□□□ 0.22
LINC00648-204ENST00000557749 RGS17Q9UGC6 210 aaPredicted RBP16.43■□□□□ 0.22
LINC00648-204ENST00000557749 TRAK1Q9UPV9 953 aa16.43■□□□□ 0.22
LINC00648-204ENST00000557749 LRP6O75581 1613 aa16.43■□□□□ 0.22
LINC00648-204ENST00000557749 PSME1Q06323 249 aa16.42■□□□□ 0.22
LINC00648-204ENST00000557749 NUTM2BA6NNL0 878 aaPredicted RBP16.41■□□□□ 0.22
LINC00648-204ENST00000557749 NUTM2EB1AL46 878 aaPredicted RBP16.41■□□□□ 0.22
LINC00648-204ENST00000557749 TRIM26Q12899 539 aaPredicted RBP16.41■□□□□ 0.22
LINC00648-204ENST00000557749 NUTM2AQ8IVF1 878 aaPredicted RBP16.41■□□□□ 0.22
LINC00648-204ENST00000557749 ZNF579Q8NAF0 562 aaKnown RBP16.41■□□□□ 0.22
LINC00648-204ENST00000557749 PHF12Q96QT6 1004 aa16.41■□□□□ 0.22
LINC00648-204ENST00000557749 PXDNQ92626 1479 aa16.41■□□□□ 0.22
LINC00648-204ENST00000557749 FOXO3O43524 673 aa16.4■□□□□ 0.22
LINC00648-204ENST00000557749 DDX17Q92841 729 aaKnown RBP16.4■□□□□ 0.22
LINC00648-204ENST00000557749 COL22A1Q8NFW1 1626 aaPredicted RBP16.4■□□□□ 0.22
LINC00648-204ENST00000557749 PYGBP11216 843 aa16.39■□□□□ 0.21
LINC00648-204ENST00000557749 SAFB2Q14151 953 aaKnown RBP eCLIP16.39■□□□□ 0.21
LINC00648-204ENST00000557749 PHF8Q9UPP1 1060 aa16.39■□□□□ 0.21
LINC00648-204ENST00000557749 NUTM2FA1L443 756 aa16.38■□□□□ 0.21
LINC00648-204ENST00000557749 PAK3O75914 559 aaPredicted RBP16.38■□□□□ 0.21
LINC00648-204ENST00000557749 TULP4Q9NRJ4 1543 aa16.38■□□□□ 0.21
LINC00648-204ENST00000557749 ARHGEF28Q8N1W1 1705 aaKnown RBP16.37■□□□□ 0.21
LINC00648-204ENST00000557749 CHRM1P11229 460 aaPredicted RBP16.37■□□□□ 0.21
LINC00648-204ENST00000557749 POTEAQ6S8J7 498 aa16.37■□□□□ 0.21
LINC00648-204ENST00000557749 WASLO00401 505 aaPredicted RBP16.36■□□□□ 0.21
LINC00648-204ENST00000557749 KIF12Q96FN5 646 aa16.36■□□□□ 0.21
LINC00648-204ENST00000557749 SBNO1A3KN83 1393 aa16.36■□□□□ 0.21
LINC00648-204ENST00000557749 ARHGEF10O15013 1369 aa16.36■□□□□ 0.21
LINC00648-204ENST00000557749 GPRASP1Q5JY77 1395 aa16.36■□□□□ 0.21
LINC00648-204ENST00000557749 KRT28Q7Z3Y7 464 aa16.35■□□□□ 0.21
LINC00648-204ENST00000557749 C8orf37Q96NL8 207 aa16.35■□□□□ 0.21
LINC00648-204ENST00000557749 AFF2P51816 1311 aa16.35■□□□□ 0.21
LINC00648-204ENST00000557749 MINK1Q8N4C8 1332 aaPredicted RBP16.35■□□□□ 0.21
LINC00648-204ENST00000557749 RXRBP28702 533 aa16.34■□□□□ 0.21
LINC00648-204ENST00000557749 L3MBTL2Q969R5 705 aa16.34■□□□□ 0.21
LINC00648-204ENST00000557749 NGLY1Q96IV0 654 aa16.34■□□□□ 0.21
LINC00648-204ENST00000557749 SPATA31A3Q5VYP0 1347 aa16.34■□□□□ 0.21
LINC00648-204ENST00000557749 TNS3Q68CZ2 1445 aa16.34■□□□□ 0.21
LINC00648-204ENST00000557749 CDK12Q9NYV4 1490 aaPredicted RBP16.34■□□□□ 0.21
LINC00648-204ENST00000557749 ITSN1Q15811 1721 aa16.33■□□□□ 0.21
LINC00648-204ENST00000557749 RNF25Q96BH1 459 aaPredicted RBP16.33■□□□□ 0.2
LINC00648-204ENST00000557749 ADAMTS2O95450 1211 aa16.32■□□□□ 0.2
LINC00648-204ENST00000557749 HIRIP3Q9BW71 556 aaPredicted RBP16.32■□□□□ 0.2
LINC00648-204ENST00000557749 MAP3K13O43283 966 aa16.31■□□□□ 0.2
LINC00648-204ENST00000557749 ECM2O94769 699 aaPredicted RBP16.31■□□□□ 0.2
LINC00648-204ENST00000557749 HAP1P54257 671 aaPredicted RBP16.31■□□□□ 0.2
LINC00648-204ENST00000557749 CENPJQ9HC77 1338 aaPredicted RBP16.3■□□□□ 0.2
LINC00648-204ENST00000557749 XPCQ01831 940 aaPredicted RBP16.3■□□□□ 0.2
LINC00648-204ENST00000557749 NEUROD1Q13562 356 aa16.3■□□□□ 0.2
LINC00648-204ENST00000557749 RGPD8O14715 1765 aaPredicted RBP16.3■□□□□ 0.2
LINC00648-204ENST00000557749 USP32Q8NFA0 1604 aa16.3■□□□□ 0.2
LINC00648-204ENST00000557749 TONSLQ96HA7 1378 aa16.29■□□□□ 0.2
LINC00648-204ENST00000557749 RBM6P78332 1123 aaKnown RBP16.29■□□□□ 0.2
LINC00648-204ENST00000557749 FNBP4Q8N3X1 1017 aaPredicted RBP16.29■□□□□ 0.2
LINC00648-204ENST00000557749 NGDNQ8NEJ9 315 aaKnown RBP16.29■□□□□ 0.2
LINC00648-204ENST00000557749 TRPC5Q9UL62 973 aaPredicted RBP16.29■□□□□ 0.2
LINC00648-204ENST00000557749 ROCK2O75116 1388 aaKnown RBP16.28■□□□□ 0.2
LINC00648-204ENST00000557749 RGL2O15211 777 aa16.28■□□□□ 0.2
LINC00648-204ENST00000557749 SIN3AQ96ST3 1273 aa16.28■□□□□ 0.2
LINC00648-204ENST00000557749 USP21Q9UK80 565 aa16.28■□□□□ 0.2
LINC00648-204ENST00000557749 ATP7BP35670 1465 aa16.28■□□□□ 0.2
LINC00648-204ENST00000557749 PMFBP1Q8TBY8 1022 aa16.27■□□□□ 0.2
LINC00648-204ENST00000557749 NUDT16Q96DE0 195 aaKnown RBP16.27■□□□□ 0.2
LINC00648-204ENST00000557749 QTRT2Q9H974 415 aaKnown RBP16.27■□□□□ 0.2
LINC00648-204ENST00000557749 MARF1Q9Y4F3 1742 aaKnown RBP16.27■□□□□ 0.19
LINC00648-204ENST00000557749 TRPM1Q7Z4N2 1603 aa16.27■□□□□ 0.19
LINC00648-204ENST00000557749 NBPF1Q3BBV0 1214 aa16.26■□□□□ 0.19
LINC00648-204ENST00000557749 CDK19Q9BWU1 502 aa16.26■□□□□ 0.19
LINC00648-204ENST00000557749 PRR36Q9H6K5 1346 aa16.25■□□□□ 0.19
LINC00648-204ENST00000557749 LMOD2Q6P5Q4 547 aa16.25■□□□□ 0.19
LINC00648-204ENST00000557749 BRD4O60885 1362 aaPredicted RBP16.25■□□□□ 0.19
LINC00648-204ENST00000557749 SRPK2P78362 688 aaKnown RBP16.24■□□□□ 0.19
LINC00648-204ENST00000557749 QRICH2Q9H0J4 1663 aa16.23■□□□□ 0.19
LINC00648-204ENST00000557749 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.22■□□□□ 0.19
LINC00648-204ENST00000557749 EVC2Q86UK5 1308 aa16.22■□□□□ 0.19
LINC00648-204ENST00000557749 PLEKHG3A1L390 1219 aa16.22■□□□□ 0.19
LINC00648-204ENST00000557749 SLC24A1O60721 1099 aa16.22■□□□□ 0.19
LINC00648-204ENST00000557749 IFNL1Q8IU54 200 aa16.22■□□□□ 0.19
LINC00648-204ENST00000557749 POLR3AO14802 1390 aaPredicted RBP16.22■□□□□ 0.19
LINC00648-204ENST00000557749 TRPM3Q9HCF6 1732 aaPredicted RBP16.22■□□□□ 0.19
LINC00648-204ENST00000557749 TOPAZ1Q8N9V7 1692 aa16.21■□□□□ 0.19
LINC00648-204ENST00000557749 ATRNO75882 1429 aa16.21■□□□□ 0.19
LINC00648-204ENST00000557749 SP7Q8TDD2 431 aaPredicted RBP16.21■□□□□ 0.19
LINC00648-204ENST00000557749 MS4A3Q96HJ5 214 aa16.21■□□□□ 0.19
LINC00648-204ENST00000557749 GALR2O43603 387 aaPredicted RBP16.2■□□□□ 0.18
LINC00648-204ENST00000557749 GABBR2O75899 941 aa16.2■□□□□ 0.18
LINC00648-204ENST00000557749 UNC5CLQ8IV45 518 aa16.2■□□□□ 0.18
LINC00648-204ENST00000557749 ALS2Q96Q42 1657 aa16.2■□□□□ 0.18
LINC00648-204ENST00000557749 SLIT2O94813 1529 aa16.19■□□□□ 0.18
LINC00648-204ENST00000557749 RALGAPBQ86X10 1494 aa16.19■□□□□ 0.18
LINC00648-204ENST00000557749 SBNO2Q9Y2G9 1366 aa16.19■□□□□ 0.18
LINC00648-204ENST00000557749 SGIP1Q9BQI5 828 aa16.19■□□□□ 0.18
LINC00648-204ENST00000557749 PCDHB8Q9UN66 801 aa16.19■□□□□ 0.18
LINC00648-204ENST00000557749 PCDHB13Q9Y5F0 798 aa16.19■□□□□ 0.18
LINC00648-204ENST00000557749 NWD2Q9ULI1 1742 aa16.19■□□□□ 0.18
LINC00648-204ENST00000557749 CLSPNQ9HAW4 1339 aa16.19■□□□□ 0.18
LINC00648-204ENST00000557749 BCL9LQ86UU0 1499 aa16.18■□□□□ 0.18
LINC00648-204ENST00000557749 PPIP5K1Q6PFW1 1433 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms