RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 TRMT44Q8IYL2 757 aaKnown RBP3.39□□□□□ -1.87
HIF1A-212ENST00000557538 C1QTNF2Q9BXJ5 285 aa3.39□□□□□ -1.87
HIF1A-212ENST00000557538 ELOAQ14241 798 aaKnown RBP3.39□□□□□ -1.87
HIF1A-212ENST00000557538 SH3RF1Q7Z6J0 888 aa3.39□□□□□ -1.87
HIF1A-212ENST00000557538 GDPD2Q9HCC8 539 aa3.39□□□□□ -1.87
HIF1A-212ENST00000557538 PHTF2Q8N3S3 785 aa3.38□□□□□ -1.87
HIF1A-212ENST00000557538 OCSTAMPQ9BR26 566 aa3.38□□□□□ -1.87
HIF1A-212ENST00000557538 ZBBXA8MT70 800 aa3.38□□□□□ -1.87
HIF1A-212ENST00000557538 NR6A1Q15406 480 aa3.38□□□□□ -1.87
HIF1A-212ENST00000557538 CSPP1Q1MSJ5 1256 aa3.38□□□□□ -1.87
HIF1A-212ENST00000557538 PUS10Q3MIT2 529 aaKnown RBP3.38□□□□□ -1.87
HIF1A-212ENST00000557538 SYMPKQ92797 1274 aaKnown RBP3.38□□□□□ -1.87
HIF1A-212ENST00000557538 PTK2Q05397 1052 aa3.38□□□□□ -1.87
HIF1A-212ENST00000557538 NBPF14Q5TI25 921 aa3.38□□□□□ -1.87
HIF1A-212ENST00000557538 TRAIPQ9BWF2 469 aa3.38□□□□□ -1.87
HIF1A-212ENST00000557538 SLC6A16Q9GZN6 736 aa3.38□□□□□ -1.87
HIF1A-212ENST00000557538 ANKLE1Q8NAG6 615 aa3.37□□□□□ -1.87
HIF1A-212ENST00000557538 ADAMTS19Q8TE59 1207 aa3.37□□□□□ -1.87
HIF1A-212ENST00000557538 KCTD12Q96CX2 325 aaKnown RBP3.37□□□□□ -1.87
HIF1A-212ENST00000557538 EIF4G2P78344 907 aaKnown RBP eCLIP3.37□□□□□ -1.87
HIF1A-212ENST00000557538 CDV3Q9UKY7 258 aaKnown RBP3.37□□□□□ -1.87
HIF1A-212ENST00000557538 ESPNB1AK53 854 aa3.36□□□□□ -1.87
HIF1A-212ENST00000557538 EPS8L1Q8TE68 723 aa3.36□□□□□ -1.87
HIF1A-212ENST00000557538 WNT7BP56706 349 aa3.36□□□□□ -1.87
HIF1A-212ENST00000557538 GLMNQ92990 594 aa3.36□□□□□ -1.87
HIF1A-212ENST00000557538 NUDT12Q9BQG2 462 aa3.36□□□□□ -1.87
HIF1A-212ENST00000557538 MAP4K5Q9Y4K4 846 aa3.36□□□□□ -1.87
HIF1A-212ENST00000557538 KCNC4Q03721 635 aa3.36□□□□□ -1.87
HIF1A-212ENST00000557538 CFAP70Q5T0N1 1121 aa3.36□□□□□ -1.87
HIF1A-212ENST00000557538 RNF166Q96A37 237 aaPredicted RBP3.36□□□□□ -1.87
HIF1A-212ENST00000557538 TRIM52Q96A61 297 aa3.36□□□□□ -1.87
HIF1A-212ENST00000557538 SUPT5HO00267 1087 aaKnown RBP3.35□□□□□ -1.87
HIF1A-212ENST00000557538 RNF40O75150 1001 aa3.35□□□□□ -1.87
HIF1A-212ENST00000557538 CCDC82Q8N4S0 544 aa3.35□□□□□ -1.87
HIF1A-212ENST00000557538 POM121CA8CG34 1229 aa3.35□□□□□ -1.87
HIF1A-212ENST00000557538 ABL2P42684 1182 aa3.35□□□□□ -1.87
HIF1A-212ENST00000557538 MAP7D1Q3KQU3 841 aa3.35□□□□□ -1.87
HIF1A-212ENST00000557538 ATG7O95352 703 aa3.35□□□□□ -1.87
HIF1A-212ENST00000557538 SEPT12Q8IYM1 358 aa3.35□□□□□ -1.87
HIF1A-212ENST00000557538 UNC93B1Q9H1C4 597 aa3.35□□□□□ -1.87
HIF1A-212ENST00000557538 ATP9BO43861 1147 aa3.34□□□□□ -1.87
HIF1A-212ENST00000557538 FBXO45P0C2W1 286 aa3.34□□□□□ -1.87
HIF1A-212ENST00000557538 HDGFL1Q5TGJ6 251 aa3.34□□□□□ -1.87
HIF1A-212ENST00000557538 PTCRAQ6ISU1 281 aaPredicted RBP3.34□□□□□ -1.87
HIF1A-212ENST00000557538 CDK15Q96Q40 435 aa3.34□□□□□ -1.87
HIF1A-212ENST00000557538 PPP1R12CQ9BZL4 782 aa3.34□□□□□ -1.87
HIF1A-212ENST00000557538 ZNF777Q9ULD5 760 aaPredicted RBP3.34□□□□□ -1.87
HIF1A-212ENST00000557538 USTQ9Y2C2 406 aa3.34□□□□□ -1.87
HIF1A-212ENST00000557538 PBXIP1Q96AQ6 731 aa3.34□□□□□ -1.87
HIF1A-212ENST00000557538 CCDC97Q96F63 343 aaPredicted RBP3.34□□□□□ -1.87
HIF1A-212ENST00000557538 UCN2Q96RP3 112 aa3.34□□□□□ -1.87
HIF1A-212ENST00000557538 GGCXP38435 758 aa3.34□□□□□ -1.88
HIF1A-212ENST00000557538 PRDM9Q9NQV7 894 aa3.33□□□□□ -1.88
HIF1A-212ENST00000557538 MAP10Q9P2G4 905 aa3.33□□□□□ -1.88
HIF1A-212ENST00000557538 CEP126Q9P2H0 1117 aa3.33□□□□□ -1.88
HIF1A-212ENST00000557538 PATL2C9JE40 543 aaKnown RBP3.33□□□□□ -1.88
HIF1A-212ENST00000557538 TLL1O43897 1013 aa3.33□□□□□ -1.88
HIF1A-212ENST00000557538 VARSP26640 1264 aaKnown RBP3.33□□□□□ -1.88
HIF1A-212ENST00000557538 COPS2P61201 443 aa3.33□□□□□ -1.88
HIF1A-212ENST00000557538 MMRN1Q13201 1228 aa3.33□□□□□ -1.88
HIF1A-212ENST00000557538 SEMA3FQ13275 785 aa3.33□□□□□ -1.88
HIF1A-212ENST00000557538 TRAF7Q6Q0C0 670 aa3.33□□□□□ -1.88
HIF1A-212ENST00000557538 ZNF511Q8NB15 262 aa3.33□□□□□ -1.88
HIF1A-212ENST00000557538 ZNF516Q92618 1163 aa3.33□□□□□ -1.88
HIF1A-212ENST00000557538 CALR3Q96L12 384 aaKnown RBP3.33□□□□□ -1.88
HIF1A-212ENST00000557538 ATP1B4Q9UN42 357 aaPredicted RBP3.33□□□□□ -1.88
HIF1A-212ENST00000557538 KANK4Q5T7N3 995 aaPredicted RBP3.32□□□□□ -1.88
HIF1A-212ENST00000557538 VAC14Q08AM6 782 aa3.32□□□□□ -1.88
HIF1A-212ENST00000557538 RNF20Q5VTR2 975 aa3.32□□□□□ -1.88
HIF1A-212ENST00000557538 BPHLQ86WA6 291 aaPredicted RBP3.32□□□□□ -1.88
HIF1A-212ENST00000557538 MAFBQ9Y5Q3 323 aaPredicted RBP3.32□□□□□ -1.88
HIF1A-212ENST00000557538 M0R2N6 131 aa3.32□□□□□ -1.88
HIF1A-212ENST00000557538 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.32□□□□□ -1.88
HIF1A-212ENST00000557538 PALM3A6NDB9 673 aaPredicted RBP3.31□□□□□ -1.88
HIF1A-212ENST00000557538 DKK1O94907 266 aa3.31□□□□□ -1.88
HIF1A-212ENST00000557538 S1PR4O95977 384 aa3.31□□□□□ -1.88
HIF1A-212ENST00000557538 ARID3CA6NKF2 412 aa3.31□□□□□ -1.88
HIF1A-212ENST00000557538 RNF223E7ERA6 249 aa3.31□□□□□ -1.88
HIF1A-212ENST00000557538 EMID1Q96A84 441 aaPredicted RBP3.31□□□□□ -1.88
HIF1A-212ENST00000557538 ARHGAP9Q9BRR9 750 aa3.31□□□□□ -1.88
HIF1A-212ENST00000557538 WASLO00401 505 aaPredicted RBP3.31□□□□□ -1.88
HIF1A-212ENST00000557538 SIAH2O43255 324 aa3.31□□□□□ -1.88
HIF1A-212ENST00000557538 SH3BP2P78314 561 aa3.31□□□□□ -1.88
HIF1A-212ENST00000557538 C4orf48Q5BLP8 95 aa3.31□□□□□ -1.88
HIF1A-212ENST00000557538 NKX2-3Q8TAU0 364 aa3.31□□□□□ -1.88
HIF1A-212ENST00000557538 A0A0G2JS52 829 aa3.3□□□□□ -1.88
HIF1A-212ENST00000557538 FAM196BA6NMK8 535 aa3.3□□□□□ -1.88
HIF1A-212ENST00000557538 PTPN5P54829 565 aa3.3□□□□□ -1.88
HIF1A-212ENST00000557538 C1orf216Q8TAB5 229 aa3.3□□□□□ -1.88
HIF1A-212ENST00000557538 ADAM32Q8TC27 787 aa3.3□□□□□ -1.88
HIF1A-212ENST00000557538 BAP1Q92560 729 aa3.3□□□□□ -1.88
HIF1A-212ENST00000557538 V9GY48 417 aaPredicted RBP3.3□□□□□ -1.88
HIF1A-212ENST00000557538 WNT7AO00755 349 aa3.29□□□□□ -1.88
HIF1A-212ENST00000557538 SIX5Q8N196 739 aa3.29□□□□□ -1.88
HIF1A-212ENST00000557538 KCTD17Q8N5Z5 321 aa3.29□□□□□ -1.88
HIF1A-212ENST00000557538 FAM174AQ8TBP5 190 aa3.29□□□□□ -1.88
HIF1A-212ENST00000557538 FCF1Q9Y324 198 aaKnown RBP3.29□□□□□ -1.88
HIF1A-212ENST00000557538 ACIN1Q9UKV3 1341 aaKnown RBP3.29□□□□□ -1.88
HIF1A-212ENST00000557538 ATP5J2-PTCD1G3V325 749 aa3.29□□□□□ -1.88
HIF1A-212ENST00000557538 CTHP32929 405 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms