RNA–Protein interactions for RNA: ENST00000557389.1

NFKBIA-209, Transcript of NFKB inhibitor alpha, humanhuman

TSL 2 BASIC

Gene NFKBIA, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-209ENST00000557389 TTC21BQ7Z4L5 1316 aa38.3■■■■□ 3.72
NFKBIA-209ENST00000557389 BRINP3Q76B58 766 aa38.29■■■■□ 3.72
NFKBIA-209ENST00000557389 XPCQ01831 940 aaPredicted RBP38.28■■■■□ 3.72
NFKBIA-209ENST00000557389 SSH2Q76I76 1423 aa38.28■■■■□ 3.72
NFKBIA-209ENST00000557389 GGNBP2Q9H3C7 697 aa38.28■■■■□ 3.72
NFKBIA-209ENST00000557389 PARD3Q8TEW0 1356 aa38.27■■■■□ 3.72
NFKBIA-209ENST00000557389 NME9Q86XW9 330 aa38.27■■■■□ 3.72
NFKBIA-209ENST00000557389 NSD2O96028 1365 aa38.26■■■■□ 3.72
NFKBIA-209ENST00000557389 FYB1O15117 783 aa38.26■■■■□ 3.72
NFKBIA-209ENST00000557389 DDX17Q92841 729 aaKnown RBP38.26■■■■□ 3.72
NFKBIA-209ENST00000557389 TRPM3Q9HCF6 1732 aaPredicted RBP38.25■■■■□ 3.71
NFKBIA-209ENST00000557389 PIK3C2AO00443 1686 aa38.25■■■■□ 3.71
NFKBIA-209ENST00000557389 ROBO1Q9Y6N7 1651 aa38.24■■■■□ 3.71
NFKBIA-209ENST00000557389 PAK3O75914 559 aaPredicted RBP38.24■■■■□ 3.71
NFKBIA-209ENST00000557389 RALBP1Q15311 655 aa38.22■■■■□ 3.71
NFKBIA-209ENST00000557389 KRT28Q7Z3Y7 464 aa38.21■■■■□ 3.71
NFKBIA-209ENST00000557389 MORC1Q86VD1 984 aa38.21■■■■□ 3.71
NFKBIA-209ENST00000557389 ZRANB1Q9UGI0 708 aa38.21■■■■□ 3.71
NFKBIA-209ENST00000557389 TTC21AQ8NDW8 1320 aa38.21■■■■□ 3.71
NFKBIA-209ENST00000557389 NHSL1Q5SYE7 1610 aa38.19■■■■□ 3.7
NFKBIA-209ENST00000557389 NPHP3Q7Z494 1330 aa38.19■■■■□ 3.7
NFKBIA-209ENST00000557389 BRD4O60885 1362 aaPredicted RBP38.17■■■■□ 3.7
NFKBIA-209ENST00000557389 TNNT2P45379 298 aaPredicted RBP38.16■■■■□ 3.7
NFKBIA-209ENST00000557389 PXDNQ92626 1479 aa38.15■■■■□ 3.7
NFKBIA-209ENST00000557389 MYBBP1AQ9BQG0 1328 aaKnown RBP38.14■■■■□ 3.7
NFKBIA-209ENST00000557389 TOM1O60784 492 aa38.14■■■■□ 3.7
NFKBIA-209ENST00000557389 MARF1Q9Y4F3 1742 aaKnown RBP38.13■■■■□ 3.7
NFKBIA-209ENST00000557389 UBAP1LF5GYI3 381 aa38.12■■■■□ 3.69
NFKBIA-209ENST00000557389 NUTM2GQ5VZR2 741 aa38.12■■■■□ 3.69
NFKBIA-209ENST00000557389 ABTB2Q8N961 1025 aa38.12■■■■□ 3.69
NFKBIA-209ENST00000557389 COG3Q96JB2 828 aa38.12■■■■□ 3.69
NFKBIA-209ENST00000557389 ALS2Q96Q42 1657 aa38.11■■■■□ 3.69
NFKBIA-209ENST00000557389 OVOS2A0A0J9YW53 1432 aa38.1■■■■□ 3.69
NFKBIA-209ENST00000557389 OVOS2Q6IE36 1432 aa38.1■■■■□ 3.69
NFKBIA-209ENST00000557389 USP54Q70EL1 1684 aa38.1■■■■□ 3.69
NFKBIA-209ENST00000557389 PIP4K2BP78356 416 aa38.09■■■■□ 3.69
NFKBIA-209ENST00000557389 LMOD2Q6P5Q4 547 aa38.08■■■■□ 3.69
NFKBIA-209ENST00000557389 SCAF1Q9H7N4 1312 aaKnown RBP38.08■■■■□ 3.69
NFKBIA-209ENST00000557389 PPP2R1AP30153 589 aa38.07■■■■□ 3.69
NFKBIA-209ENST00000557389 NLRP6P59044 892 aa38.06■■■■□ 3.68
NFKBIA-209ENST00000557389 SBNO1A3KN83 1393 aa38.04■■■■□ 3.68
NFKBIA-209ENST00000557389 USP31Q70CQ4 1352 aa38.04■■■■□ 3.68
NFKBIA-209ENST00000557389 CCER2I3L3R5 266 aa38.04■■■■□ 3.68
NFKBIA-209ENST00000557389 CCDC184Q52MB2 194 aa38.03■■■■□ 3.68
NFKBIA-209ENST00000557389 TNS3Q68CZ2 1445 aa38.03■■■■□ 3.68
NFKBIA-209ENST00000557389 AHDC1Q5TGY3 1603 aaPredicted RBP38.03■■■■□ 3.68
NFKBIA-209ENST00000557389 MAP2P11137 1827 aaKnown RBP38.01■■■■□ 3.68
NFKBIA-209ENST00000557389 PLEKHG5O94827 1062 aa38.01■■■■□ 3.67
NFKBIA-209ENST00000557389 SOS2Q07890 1332 aaPredicted RBP38.01■■■■□ 3.67
NFKBIA-209ENST00000557389 NLRP13Q86W25 1043 aa38■■■■□ 3.67
NFKBIA-209ENST00000557389 PHLPP1O60346 1717 aa38■■■■□ 3.67
NFKBIA-209ENST00000557389 SOX12O15370 315 aa37.99■■■■□ 3.67
NFKBIA-209ENST00000557389 FBLN1P23142 703 aa37.98■■■■□ 3.67
NFKBIA-209ENST00000557389 MRS2Q9HD23 443 aa37.97■■■■□ 3.67
NFKBIA-209ENST00000557389 SPATA31A3Q5VYP0 1347 aa37.97■■■■□ 3.67
NFKBIA-209ENST00000557389 PHRF1Q9P1Y6 1649 aaKnown RBP37.91■■■■□ 3.66
NFKBIA-209ENST00000557389 ARHGEF10O15013 1369 aa37.9■■■■□ 3.66
NFKBIA-209ENST00000557389 MTHFSP49914 203 aa37.9■■■■□ 3.66
NFKBIA-209ENST00000557389 MED1Q15648 1581 aaPredicted RBP37.89■■■■□ 3.66
NFKBIA-209ENST00000557389 CRYBG1Q9Y4K1 1723 aa37.89■■■■□ 3.66
NFKBIA-209ENST00000557389 SLIT3O75094 1523 aa37.89■■■■□ 3.66
NFKBIA-209ENST00000557389 COL16A1Q07092 1604 aaPredicted RBP37.88■■■■□ 3.66
NFKBIA-209ENST00000557389 AATKQ6ZMQ8 1374 aa37.88■■■■□ 3.65
NFKBIA-209ENST00000557389 RRS1Q15050 365 aaKnown RBP37.87■■■■□ 3.65
NFKBIA-209ENST00000557389 LTN1O94822 1766 aa37.87■■■■□ 3.65
NFKBIA-209ENST00000557389 NFAT5O94916 1531 aa37.85■■■■□ 3.65
NFKBIA-209ENST00000557389 PPM1GO15355 546 aaPredicted RBP37.85■■■■□ 3.65
NFKBIA-209ENST00000557389 POLKQ9UBT6 870 aa37.85■■■■□ 3.65
NFKBIA-209ENST00000557389 EMILIN1Q9Y6C2 1016 aa37.85■■■■□ 3.65
NFKBIA-209ENST00000557389 USP19O94966 1318 aa37.84■■■■□ 3.65
NFKBIA-209ENST00000557389 ABCA3Q99758 1704 aa37.83■■■■□ 3.65
NFKBIA-209ENST00000557389 PEAK1Q9H792 1746 aa37.83■■■■□ 3.65
NFKBIA-209ENST00000557389 CABLES1Q8TDN4 633 aa37.82■■■■□ 3.64
NFKBIA-209ENST00000557389 SMG6Q86US8 1419 aaKnown RBP37.81■■■■□ 3.64
NFKBIA-209ENST00000557389 KCNH5Q8NCM2 988 aa37.79■■■■□ 3.64
NFKBIA-209ENST00000557389 LRRC59Q96AG4 307 aaKnown RBP37.79■■■■□ 3.64
NFKBIA-209ENST00000557389 GCP02774 474 aa37.78■■■■□ 3.64
NFKBIA-209ENST00000557389 CFAP53Q96M91 514 aa37.77■■■■□ 3.64
NFKBIA-209ENST00000557389 MAP3K19Q56UN5 1328 aa37.77■■■■□ 3.64
NFKBIA-209ENST00000557389 CDK12Q9NYV4 1490 aaPredicted RBP37.76■■■■□ 3.64
NFKBIA-209ENST00000557389 SHPRHQ149N8 1683 aa37.76■■■■□ 3.63
NFKBIA-209ENST00000557389 ZBTB7CA1YPR0 619 aa37.76■■■■□ 3.63
NFKBIA-209ENST00000557389 FAM9BQ8IZU0 186 aa37.74■■■■□ 3.63
NFKBIA-209ENST00000557389 COL22A1Q8NFW1 1626 aaPredicted RBP37.73■■■■□ 3.63
NFKBIA-209ENST00000557389 COL3A1P02461 1466 aaPredicted RBP37.73■■■■□ 3.63
NFKBIA-209ENST00000557389 AMPHP49418 695 aa37.71■■■■□ 3.63
NFKBIA-209ENST00000557389 PNPLA6Q8IY17 1366 aa37.7■■■■□ 3.63
NFKBIA-209ENST00000557389 HSPA1LP34931 641 aa37.7■■■■□ 3.63
NFKBIA-209ENST00000557389 PNISRQ8TF01 805 aaKnown RBP37.7■■■■□ 3.63
NFKBIA-209ENST00000557389 HAP1P54257 671 aaPredicted RBP37.69■■■■□ 3.62
NFKBIA-209ENST00000557389 ZC3H6P61129 1189 aaKnown RBP37.68■■■■□ 3.62
NFKBIA-209ENST00000557389 FLT4P35916 1363 aa37.66■■■■□ 3.62
NFKBIA-209ENST00000557389 WDR43Q15061 677 aaKnown RBP eCLIP37.64■■■■□ 3.62
NFKBIA-209ENST00000557389 HSP90AB2PQ58FF8 381 aa37.63■■■■□ 3.61
NFKBIA-209ENST00000557389 ARHGEF25Q86VW2 580 aa37.63■■■■□ 3.61
NFKBIA-209ENST00000557389 RGPD5Q99666 1765 aa37.63■■■■□ 3.61
NFKBIA-209ENST00000557389 INSRP06213 1382 aa37.62■■■■□ 3.61
NFKBIA-209ENST00000557389 RTL1A6NKG5 1358 aa37.62■■■■□ 3.61
NFKBIA-209ENST00000557389 DIAPH1O60610 1272 aaKnown RBP37.61■■■■□ 3.61
NFKBIA-209ENST00000557389 HOXC9P31274 260 aa37.61■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms