RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 ANKRD30BQ9BXX2 1392 aa8.71□□□□□ -1.02
PRKCH-220ENST00000556164 TNS3Q68CZ2 1445 aa8.71□□□□□ -1.02
PRKCH-220ENST00000556164 SPATA31E1Q6ZUB1 1445 aa8.71□□□□□ -1.02
PRKCH-220ENST00000556164 KRT28Q7Z3Y7 464 aa8.7□□□□□ -1.02
PRKCH-220ENST00000556164 DEFB132Q7Z7B7 95 aa8.7□□□□□ -1.02
PRKCH-220ENST00000556164 CCDC9Q9Y3X0 531 aaKnown RBP8.7□□□□□ -1.02
PRKCH-220ENST00000556164 PIK3C2GO75747 1445 aa8.7□□□□□ -1.02
PRKCH-220ENST00000556164 YTHDC2Q9H6S0 1430 aaKnown RBP8.7□□□□□ -1.02
PRKCH-220ENST00000556164 LRP5O75197 1615 aa8.69□□□□□ -1.02
PRKCH-220ENST00000556164 SEPT12Q8IYM1 358 aa8.69□□□□□ -1.02
PRKCH-220ENST00000556164 SPOCK2Q92563 424 aa8.69□□□□□ -1.02
PRKCH-220ENST00000556164 PSME1Q06323 249 aa8.68□□□□□ -1.02
PRKCH-220ENST00000556164 VPS72Q15906 364 aa8.68□□□□□ -1.02
PRKCH-220ENST00000556164 LMOD2Q6P5Q4 547 aa8.68□□□□□ -1.02
PRKCH-220ENST00000556164 CABLES1Q8TDN4 633 aa8.68□□□□□ -1.02
PRKCH-220ENST00000556164 PHF8Q9UPP1 1060 aa8.68□□□□□ -1.02
PRKCH-220ENST00000556164 NRAPQ86VF7 1730 aa8.68□□□□□ -1.02
PRKCH-220ENST00000556164 A0A0G2JS52 829 aa8.67□□□□□ -1.02
PRKCH-220ENST00000556164 MYT1Q01538 1121 aa8.67□□□□□ -1.02
PRKCH-220ENST00000556164 KRT27Q7Z3Y8 459 aa8.67□□□□□ -1.02
PRKCH-220ENST00000556164 NRXN1Q9ULB1 1477 aa8.67□□□□□ -1.02
PRKCH-220ENST00000556164 RGPD1P0DJD0 1748 aa8.66□□□□□ -1.02
PRKCH-220ENST00000556164 TRPM3Q9HCF6 1732 aaPredicted RBP8.66□□□□□ -1.02
PRKCH-220ENST00000556164 SBNO1A3KN83 1393 aa8.66□□□□□ -1.02
PRKCH-220ENST00000556164 ARHGEF10O15013 1369 aa8.66□□□□□ -1.02
PRKCH-220ENST00000556164 SAFB2Q14151 953 aaKnown RBP eCLIP8.66□□□□□ -1.02
PRKCH-220ENST00000556164 MPHOSPH9Q99550 1183 aa8.66□□□□□ -1.02
PRKCH-220ENST00000556164 PODXL2Q9NZ53 605 aa8.66□□□□□ -1.02
PRKCH-220ENST00000556164 ZNF219Q9P2Y4 722 aaPredicted RBP8.66□□□□□ -1.02
PRKCH-220ENST00000556164 DHX57Q6P158 1386 aaKnown RBP8.65□□□□□ -1.02
PRKCH-220ENST00000556164 COL14A1Q05707 1796 aaKnown RBP8.65□□□□□ -1.02
PRKCH-220ENST00000556164 ALS2Q96Q42 1657 aa8.65□□□□□ -1.03
PRKCH-220ENST00000556164 PSDA5PKW4 1024 aaPredicted RBP8.64□□□□□ -1.03
PRKCH-220ENST00000556164 FAM83GA6ND36 823 aa8.64□□□□□ -1.03
PRKCH-220ENST00000556164 ONECUT3O60422 494 aaPredicted RBP8.64□□□□□ -1.03
PRKCH-220ENST00000556164 BAG6P46379 1132 aa8.64□□□□□ -1.03
PRKCH-220ENST00000556164 CFAP70Q5T0N1 1121 aa8.64□□□□□ -1.03
PRKCH-220ENST00000556164 PMFBP1Q8TBY8 1022 aa8.64□□□□□ -1.03
PRKCH-220ENST00000556164 SIRT1Q96EB6 747 aa8.64□□□□□ -1.03
PRKCH-220ENST00000556164 PRAM1Q96QH2 718 aa8.64□□□□□ -1.03
PRKCH-220ENST00000556164 C14orf93Q9H972 538 aaKnown RBP8.64□□□□□ -1.03
PRKCH-220ENST00000556164 ADGRB2O60241 1585 aa8.64□□□□□ -1.03
PRKCH-220ENST00000556164 ANKARQ7Z5J8 1434 aa8.63□□□□□ -1.03
PRKCH-220ENST00000556164 TNS1Q9HBL0 1735 aaKnown RBP8.63□□□□□ -1.03
PRKCH-220ENST00000556164 FAM98CQ17RN3 349 aaKnown RBP8.63□□□□□ -1.03
PRKCH-220ENST00000556164 POGKQ9P215 609 aa8.63□□□□□ -1.03
PRKCH-220ENST00000556164 DLC1Q96QB1 1528 aa8.63□□□□□ -1.03
PRKCH-220ENST00000556164 CRYBG1Q9Y4K1 1723 aa8.63□□□□□ -1.03
PRKCH-220ENST00000556164 RGL2O15211 777 aa8.62□□□□□ -1.03
PRKCH-220ENST00000556164 BTG4Q9NY30 223 aa8.62□□□□□ -1.03
PRKCH-220ENST00000556164 GPRASP1Q5JY77 1395 aa8.61□□□□□ -1.03
PRKCH-220ENST00000556164 ITSN1Q15811 1721 aa8.61□□□□□ -1.03
PRKCH-220ENST00000556164 HRCP23327 699 aa8.61□□□□□ -1.03
PRKCH-220ENST00000556164 EN1Q05925 392 aaPredicted RBP8.61□□□□□ -1.03
PRKCH-220ENST00000556164 FAM182BQ5T319 152 aa8.61□□□□□ -1.03
PRKCH-220ENST00000556164 HIRIP3Q9BW71 556 aaPredicted RBP8.61□□□□□ -1.03
PRKCH-220ENST00000556164 THSD7AQ9UPZ6 1657 aa8.61□□□□□ -1.03
PRKCH-220ENST00000556164 TULP4Q9NRJ4 1543 aa8.6□□□□□ -1.03
PRKCH-220ENST00000556164 ADGRB1O14514 1584 aa8.6□□□□□ -1.03
PRKCH-220ENST00000556164 EIF3AQ14152 1382 aaKnown RBP8.6□□□□□ -1.03
PRKCH-220ENST00000556164 MINK1Q8N4C8 1332 aaPredicted RBP8.59□□□□□ -1.03
PRKCH-220ENST00000556164 ACIN1Q9UKV3 1341 aaKnown RBP8.59□□□□□ -1.03
PRKCH-220ENST00000556164 PHRF1Q9P1Y6 1649 aaKnown RBP8.59□□□□□ -1.03
PRKCH-220ENST00000556164 PAK3O75914 559 aaPredicted RBP8.59□□□□□ -1.03
PRKCH-220ENST00000556164 TRAK1Q9UPV9 953 aa8.59□□□□□ -1.03
PRKCH-220ENST00000556164 SPATA31A5Q5VU36 1347 aa8.58□□□□□ -1.04
PRKCH-220ENST00000556164 SPATA31A7Q8IWB4 1347 aa8.58□□□□□ -1.04
PRKCH-220ENST00000556164 PRR36Q9H6K5 1346 aa8.58□□□□□ -1.04
PRKCH-220ENST00000556164 ARHGEF28Q8N1W1 1705 aaKnown RBP8.58□□□□□ -1.04
PRKCH-220ENST00000556164 R3HDM1Q15032 1099 aaKnown RBP8.58□□□□□ -1.04
PRKCH-220ENST00000556164 PRDM11Q9NQV5 511 aa8.58□□□□□ -1.04
PRKCH-220ENST00000556164 DISP2A7MBM2 1401 aa8.57□□□□□ -1.04
PRKCH-220ENST00000556164 EZH2Q15910 746 aaKnown RBP8.57□□□□□ -1.04
PRKCH-220ENST00000556164 NGDNQ8NEJ9 315 aaKnown RBP8.57□□□□□ -1.04
PRKCH-220ENST00000556164 WASLO00401 505 aaPredicted RBP8.56□□□□□ -1.04
PRKCH-220ENST00000556164 MKRN4PQ13434 485 aaPredicted RBP8.56□□□□□ -1.04
PRKCH-220ENST00000556164 CHRNA2Q15822 529 aa8.56□□□□□ -1.04
PRKCH-220ENST00000556164 KLHL34Q8N239 644 aa8.56□□□□□ -1.04
PRKCH-220ENST00000556164 STRN4Q9NRL3 753 aa8.56□□□□□ -1.04
PRKCH-220ENST00000556164 NUP188Q5SRE5 1749 aa8.56□□□□□ -1.04
PRKCH-220ENST00000556164 KIAA0232Q92628 1395 aa8.56□□□□□ -1.04
PRKCH-220ENST00000556164 RREB1Q92766 1687 aa8.56□□□□□ -1.04
PRKCH-220ENST00000556164 SPATA31A1Q5TZJ5 1347 aa8.55□□□□□ -1.04
PRKCH-220ENST00000556164 TRIM37O94972 964 aa8.55□□□□□ -1.04
PRKCH-220ENST00000556164 ATP7BP35670 1465 aa8.55□□□□□ -1.04
PRKCH-220ENST00000556164 TOPAZ1Q8N9V7 1692 aa8.55□□□□□ -1.04
PRKCH-220ENST00000556164 FAM196AQ6ZSG2 479 aa8.54□□□□□ -1.04
PRKCH-220ENST00000556164 DCAF11Q8TEB1 546 aa8.54□□□□□ -1.04
PRKCH-220ENST00000556164 USP35Q9P2H5 1018 aa8.54□□□□□ -1.04
PRKCH-220ENST00000556164 NRKQ7Z2Y5 1582 aa8.53□□□□□ -1.04
PRKCH-220ENST00000556164 RAB3GAP2Q9H2M9 1393 aa8.53□□□□□ -1.04
PRKCH-220ENST00000556164 APBA3O96018 575 aa8.53□□□□□ -1.04
PRKCH-220ENST00000556164 ZC3H6P61129 1189 aaKnown RBP8.53□□□□□ -1.04
PRKCH-220ENST00000556164 NUTM2GQ5VZR2 741 aa8.53□□□□□ -1.04
PRKCH-220ENST00000556164 NUDT16Q96DE0 195 aaKnown RBP8.53□□□□□ -1.04
PRKCH-220ENST00000556164 CAMKK2Q96RR4 588 aa8.53□□□□□ -1.04
PRKCH-220ENST00000556164 SSH2Q76I76 1423 aa8.53□□□□□ -1.04
PRKCH-220ENST00000556164 PARD3Q8TEW0 1356 aa8.52□□□□□ -1.05
PRKCH-220ENST00000556164 EVA1CP58658 441 aa8.52□□□□□ -1.05
PRKCH-220ENST00000556164 PARP4Q9UKK3 1724 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms