RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 ST20-MTHFSA0A0A6YYL1 179 aa12.68□□□□□ -0.38
CHD8-210ENST00000555962 ESCO1Q5FWF5 840 aa12.68□□□□□ -0.38
CHD8-210ENST00000555962 DDX17Q92841 729 aaKnown RBP12.68□□□□□ -0.38
CHD8-210ENST00000555962 RGL2O15211 777 aa12.67□□□□□ -0.38
CHD8-210ENST00000555962 PAXIP1Q6ZW49 1069 aaPredicted RBP12.67□□□□□ -0.38
CHD8-210ENST00000555962 TESK2Q96S53 571 aa12.67□□□□□ -0.38
CHD8-210ENST00000555962 NUDT16Q96DE0 195 aaKnown RBP12.66□□□□□ -0.38
CHD8-210ENST00000555962 CABP2Q9NPB3 220 aa12.66□□□□□ -0.38
CHD8-210ENST00000555962 PHF8Q9UPP1 1060 aa12.65□□□□□ -0.38
CHD8-210ENST00000555962 TRPM3Q9HCF6 1732 aaPredicted RBP12.65□□□□□ -0.38
CHD8-210ENST00000555962 PXDNQ92626 1479 aa12.65□□□□□ -0.38
CHD8-210ENST00000555962 EVC2Q86UK5 1308 aa12.64□□□□□ -0.39
CHD8-210ENST00000555962 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
CHD8-210ENST00000555962 AKAP12Q02952 1782 aa12.64□□□□□ -0.39
CHD8-210ENST00000555962 PLEKHG5O94827 1062 aa12.64□□□□□ -0.39
CHD8-210ENST00000555962 SRPK2P78362 688 aaKnown RBP12.64□□□□□ -0.39
CHD8-210ENST00000555962 CFAP44Q96MT7 982 aa12.64□□□□□ -0.39
CHD8-210ENST00000555962 FOXO3O43524 673 aa12.63□□□□□ -0.39
CHD8-210ENST00000555962 PMFBP1Q8TBY8 1022 aa12.63□□□□□ -0.39
CHD8-210ENST00000555962 SOS2Q07890 1332 aaPredicted RBP12.62□□□□□ -0.39
CHD8-210ENST00000555962 DISP3Q9P2K9 1392 aa12.62□□□□□ -0.39
CHD8-210ENST00000555962 HSPA5P11021 654 aaKnown RBP12.62□□□□□ -0.39
CHD8-210ENST00000555962 XPCQ01831 940 aaPredicted RBP12.62□□□□□ -0.39
CHD8-210ENST00000555962 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
CHD8-210ENST00000555962 CIZ1Q9ULV3 898 aaPredicted RBP12.62□□□□□ -0.39
CHD8-210ENST00000555962 PPIP5K1Q6PFW1 1433 aa12.62□□□□□ -0.39
CHD8-210ENST00000555962 CCDC61Q9Y6R9 512 aa12.61□□□□□ -0.39
CHD8-210ENST00000555962 NPHP3Q7Z494 1330 aa12.61□□□□□ -0.39
CHD8-210ENST00000555962 MYOM1P52179 1685 aa12.61□□□□□ -0.39
CHD8-210ENST00000555962 ALS2Q96Q42 1657 aa12.61□□□□□ -0.39
CHD8-210ENST00000555962 EIF4G2P78344 907 aaKnown RBP eCLIP12.6□□□□□ -0.39
CHD8-210ENST00000555962 MON2Q7Z3U7 1717 aa12.59□□□□□ -0.39
CHD8-210ENST00000555962 POLR3AO14802 1390 aaPredicted RBP12.59□□□□□ -0.39
CHD8-210ENST00000555962 PLEKHG3A1L390 1219 aa12.59□□□□□ -0.39
CHD8-210ENST00000555962 ACEP12821 1306 aa12.59□□□□□ -0.39
CHD8-210ENST00000555962 COL22A1Q8NFW1 1626 aaPredicted RBP12.59□□□□□ -0.39
CHD8-210ENST00000555962 KRT28Q7Z3Y7 464 aa12.58□□□□□ -0.4
CHD8-210ENST00000555962 NGDNQ8NEJ9 315 aaKnown RBP12.58□□□□□ -0.4
CHD8-210ENST00000555962 CABP1Q9NZU7 370 aa12.58□□□□□ -0.4
CHD8-210ENST00000555962 ATAD2Q6PL18 1390 aa12.57□□□□□ -0.4
CHD8-210ENST00000555962 JCADQ9P266 1359 aa12.57□□□□□ -0.4
CHD8-210ENST00000555962 ABCA3Q99758 1704 aa12.57□□□□□ -0.4
CHD8-210ENST00000555962 CRYBG1Q9Y4K1 1723 aa12.57□□□□□ -0.4
CHD8-210ENST00000555962 TMF1P82094 1093 aa12.57□□□□□ -0.4
CHD8-210ENST00000555962 LRRC59Q96AG4 307 aaKnown RBP12.57□□□□□ -0.4
CHD8-210ENST00000555962 PNPLA6Q8IY17 1366 aa12.56□□□□□ -0.4
CHD8-210ENST00000555962 NRKQ7Z2Y5 1582 aa12.56□□□□□ -0.4
CHD8-210ENST00000555962 PSME1Q06323 249 aa12.56□□□□□ -0.4
CHD8-210ENST00000555962 SPRYD3Q8NCJ5 442 aa12.56□□□□□ -0.4
CHD8-210ENST00000555962 PUS7Q96PZ0 661 aaKnown RBP12.56□□□□□ -0.4
CHD8-210ENST00000555962 CD163L1Q9NR16 1453 aa12.56□□□□□ -0.4
CHD8-210ENST00000555962 MARF1Q9Y4F3 1742 aaKnown RBP12.56□□□□□ -0.4
CHD8-210ENST00000555962 TNS3Q68CZ2 1445 aa12.55□□□□□ -0.4
CHD8-210ENST00000555962 SPATA31A3Q5VYP0 1347 aa12.55□□□□□ -0.4
CHD8-210ENST00000555962 MED1Q15648 1581 aaPredicted RBP12.55□□□□□ -0.4
CHD8-210ENST00000555962 SBNO1A3KN83 1393 aa12.55□□□□□ -0.4
CHD8-210ENST00000555962 LRP6O75581 1613 aa12.55□□□□□ -0.4
CHD8-210ENST00000555962 CPSF1Q10570 1443 aaKnown RBP12.54□□□□□ -0.4
CHD8-210ENST00000555962 SLC12A5Q9H2X9 1139 aa12.54□□□□□ -0.4
CHD8-210ENST00000555962 USP6P35125 1406 aa12.54□□□□□ -0.4
CHD8-210ENST00000555962 C11orf95C9JLR9 678 aaPredicted RBP12.53□□□□□ -0.4
CHD8-210ENST00000555962 TMC1Q8TDI8 760 aa12.53□□□□□ -0.4
CHD8-210ENST00000555962 PIK3C2AO00443 1686 aa12.53□□□□□ -0.4
CHD8-210ENST00000555962 SSH2Q76I76 1423 aa12.53□□□□□ -0.4
CHD8-210ENST00000555962 PHRF1Q9P1Y6 1649 aaKnown RBP12.51□□□□□ -0.41
CHD8-210ENST00000555962 PAK3O75914 559 aaPredicted RBP12.51□□□□□ -0.41
CHD8-210ENST00000555962 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
CHD8-210ENST00000555962 SPATA31A6Q5VVP1 1343 aa12.51□□□□□ -0.41
CHD8-210ENST00000555962 A0A1W2PP64 1363 aa12.51□□□□□ -0.41
CHD8-210ENST00000555962 CDCA8Q53HL2 280 aa12.5□□□□□ -0.41
CHD8-210ENST00000555962 LMOD2Q6P5Q4 547 aa12.5□□□□□ -0.41
CHD8-210ENST00000555962 KTN1Q86UP2 1357 aaKnown RBP12.5□□□□□ -0.41
CHD8-210ENST00000555962 NINLQ9Y2I6 1382 aa12.5□□□□□ -0.41
CHD8-210ENST00000555962 USP54Q70EL1 1684 aa12.49□□□□□ -0.41
CHD8-210ENST00000555962 ARHGEF10O15013 1369 aa12.49□□□□□ -0.41
CHD8-210ENST00000555962 NUTM2BA6NNL0 878 aaPredicted RBP12.49□□□□□ -0.41
CHD8-210ENST00000555962 NUTM2EB1AL46 878 aaPredicted RBP12.49□□□□□ -0.41
CHD8-210ENST00000555962 PRKCSHP14314 528 aaPredicted RBP12.49□□□□□ -0.41
CHD8-210ENST00000555962 ZEB1P37275 1124 aaPredicted RBP12.49□□□□□ -0.41
CHD8-210ENST00000555962 NUTM2AQ8IVF1 878 aaPredicted RBP12.49□□□□□ -0.41
CHD8-210ENST00000555962 KIF20BQ96Q89 1820 aa12.48□□□□□ -0.41
CHD8-210ENST00000555962 BRD4O60885 1362 aaPredicted RBP12.48□□□□□ -0.41
CHD8-210ENST00000555962 TTC21BQ7Z4L5 1316 aa12.48□□□□□ -0.41
CHD8-210ENST00000555962 NUTM2GQ5VZR2 741 aa12.48□□□□□ -0.41
CHD8-210ENST00000555962 CABLES1Q8TDN4 633 aa12.48□□□□□ -0.41
CHD8-210ENST00000555962 POLR3GLQ9BT43 218 aa12.48□□□□□ -0.41
CHD8-210ENST00000555962 ANKRD36BQ8N2N9 1353 aa12.47□□□□□ -0.41
CHD8-210ENST00000555962 KIF7Q2M1P5 1343 aa12.47□□□□□ -0.41
CHD8-210ENST00000555962 HDGFL2Q7Z4V5 671 aaPredicted RBP12.47□□□□□ -0.41
CHD8-210ENST00000555962 TSHZ2Q9NRE2 1034 aa12.47□□□□□ -0.41
CHD8-210ENST00000555962 TERF2IPQ9NYB0 399 aa12.47□□□□□ -0.41
CHD8-210ENST00000555962 EDC4Q6P2E9 1401 aaKnown RBP12.46□□□□□ -0.41
CHD8-210ENST00000555962 ABTB2Q8N961 1025 aa12.46□□□□□ -0.41
CHD8-210ENST00000555962 PLCH1Q4KWH8 1693 aa12.45□□□□□ -0.42
CHD8-210ENST00000555962 ADAMTS2O95450 1211 aa12.45□□□□□ -0.42
CHD8-210ENST00000555962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.45□□□□□ -0.427e-6■■■■□ 19.6
CHD8-210ENST00000555962 CCDC7Q96M83 1385 aa12.44□□□□□ -0.42
CHD8-210ENST00000555962 WASHC2AQ641Q2 1341 aa12.44□□□□□ -0.42
CHD8-210ENST00000555962 TTC21AQ8NDW8 1320 aa12.44□□□□□ -0.42
CHD8-210ENST00000555962 SLIT3O75094 1523 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms