RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 PXDNQ92626 1479 aa17.13■□□□□ 0.33
ABCD4-223ENST00000555904 SOS2Q07890 1332 aaPredicted RBP17.13■□□□□ 0.33
ABCD4-223ENST00000555904 SBNO1A3KN83 1393 aa17.13■□□□□ 0.33
ABCD4-223ENST00000555904 NRKQ7Z2Y5 1582 aa17.12■□□□□ 0.33
ABCD4-223ENST00000555904 LMOD2Q6P5Q4 547 aa17.12■□□□□ 0.33
ABCD4-223ENST00000555904 CARD14Q9BXL6 1004 aa17.12■□□□□ 0.33
ABCD4-223ENST00000555904 TTC21BQ7Z4L5 1316 aa17.12■□□□□ 0.33
ABCD4-223ENST00000555904 PHLPP1O60346 1717 aa17.11■□□□□ 0.33
ABCD4-223ENST00000555904 ARHGEF10O15013 1369 aa17.11■□□□□ 0.33
ABCD4-223ENST00000555904 TNS3Q68CZ2 1445 aa17.11■□□□□ 0.33
ABCD4-223ENST00000555904 ABTB2Q8N961 1025 aa17.1■□□□□ 0.33
ABCD4-223ENST00000555904 LRRC59Q96AG4 307 aaKnown RBP17.1■□□□□ 0.33
ABCD4-223ENST00000555904 SSH2Q76I76 1423 aa17.1■□□□□ 0.33
ABCD4-223ENST00000555904 FBXO41Q8TF61 875 aa17.09■□□□□ 0.33
ABCD4-223ENST00000555904 NSD2O96028 1365 aa17.09■□□□□ 0.33
ABCD4-223ENST00000555904 TRPM3Q9HCF6 1732 aaPredicted RBP17.08■□□□□ 0.32
ABCD4-223ENST00000555904 SPATA31A3Q5VYP0 1347 aa17.08■□□□□ 0.32
ABCD4-223ENST00000555904 PER1O15534 1290 aaPredicted RBP17.07■□□□□ 0.32
ABCD4-223ENST00000555904 COL16A1Q07092 1604 aaPredicted RBP17.07■□□□□ 0.32
ABCD4-223ENST00000555904 NLRP6P59044 892 aa17.06■□□□□ 0.32
ABCD4-223ENST00000555904 NLRP13Q86W25 1043 aa17.06■□□□□ 0.32
ABCD4-223ENST00000555904 NME9Q86XW9 330 aa17.06■□□□□ 0.32
ABCD4-223ENST00000555904 COG3Q96JB2 828 aa17.06■□□□□ 0.32
ABCD4-223ENST00000555904 GGNBP2Q9H3C7 697 aa17.05■□□□□ 0.32
ABCD4-223ENST00000555904 KIF20BQ96Q89 1820 aa17.05■□□□□ 0.32
ABCD4-223ENST00000555904 NPC1L1Q9UHC9 1359 aa17.04■□□□□ 0.32
ABCD4-223ENST00000555904 PIK3C2AO00443 1686 aa17.04■□□□□ 0.32
ABCD4-223ENST00000555904 FYB1O15117 783 aa17.04■□□□□ 0.32
ABCD4-223ENST00000555904 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
ABCD4-223ENST00000555904 AMER1Q5JTC6 1135 aaPredicted RBP17.04■□□□□ 0.32
ABCD4-223ENST00000555904 CC2D1BQ5T0F9 858 aaKnown RBP17.04■□□□□ 0.32
ABCD4-223ENST00000555904 NUTM2GQ5VZR2 741 aa17.04■□□□□ 0.32
ABCD4-223ENST00000555904 ALS2Q96Q42 1657 aa17.04■□□□□ 0.32
ABCD4-223ENST00000555904 HSPA1LP34931 641 aa17.03■□□□□ 0.32
ABCD4-223ENST00000555904 HAP1P54257 671 aaPredicted RBP17.03■□□□□ 0.32
ABCD4-223ENST00000555904 USP31Q70CQ4 1352 aa17.02■□□□□ 0.32
ABCD4-223ENST00000555904 MORC1Q86VD1 984 aa17.02■□□□□ 0.32
ABCD4-223ENST00000555904 JCADQ9P266 1359 aa17.02■□□□□ 0.31
ABCD4-223ENST00000555904 PLEKHG5O94827 1062 aa17.01■□□□□ 0.31
ABCD4-223ENST00000555904 OVOS2A0A0J9YW53 1432 aa17.01■□□□□ 0.31
ABCD4-223ENST00000555904 OVOS2Q6IE36 1432 aa17.01■□□□□ 0.31
ABCD4-223ENST00000555904 PNPLA6Q8IY17 1366 aa17.01■□□□□ 0.31
ABCD4-223ENST00000555904 ANP32CO43423 234 aa17■□□□□ 0.31
ABCD4-223ENST00000555904 MED1Q15648 1581 aaPredicted RBP17■□□□□ 0.31
ABCD4-223ENST00000555904 DIEXFQ68CQ4 756 aaKnown RBP17■□□□□ 0.31
ABCD4-223ENST00000555904 KCNH5Q8NCM2 988 aa17■□□□□ 0.31
ABCD4-223ENST00000555904 ZRANB1Q9UGI0 708 aa16.99■□□□□ 0.31
ABCD4-223ENST00000555904 ANKRD26Q9UPS8 1709 aa16.99■□□□□ 0.31
ABCD4-223ENST00000555904 USP19O94966 1318 aa16.98■□□□□ 0.31
ABCD4-223ENST00000555904 USP54Q70EL1 1684 aa16.98■□□□□ 0.31
ABCD4-223ENST00000555904 COL22A1Q8NFW1 1626 aaPredicted RBP16.97■□□□□ 0.31
ABCD4-223ENST00000555904 SOX12O15370 315 aa16.97■□□□□ 0.31
ABCD4-223ENST00000555904 TNNT2P45379 298 aaPredicted RBP16.97■□□□□ 0.31
ABCD4-223ENST00000555904 RALBP1Q15311 655 aa16.97■□□□□ 0.31
ABCD4-223ENST00000555904 SHPRHQ149N8 1683 aa16.97■□□□□ 0.31
ABCD4-223ENST00000555904 SLIT3O75094 1523 aa16.96■□□□□ 0.3
ABCD4-223ENST00000555904 SPATA31A6Q5VVP1 1343 aa16.96■□□□□ 0.3
ABCD4-223ENST00000555904 GCP02774 474 aa16.95■□□□□ 0.3
ABCD4-223ENST00000555904 CABLES1Q8TDN4 633 aa16.95■□□□□ 0.3
ABCD4-223ENST00000555904 PARD3Q8TEW0 1356 aa16.94■□□□□ 0.3
ABCD4-223ENST00000555904 PHRF1Q9P1Y6 1649 aaKnown RBP16.94■□□□□ 0.3
ABCD4-223ENST00000555904 PRKRIP1Q9H875 184 aaPredicted RBP16.93■□□□□ 0.3
ABCD4-223ENST00000555904 AATKQ6ZMQ8 1374 aa16.92■□□□□ 0.3
ABCD4-223ENST00000555904 NUTM2BA6NNL0 878 aaPredicted RBP16.92■□□□□ 0.3
ABCD4-223ENST00000555904 NUTM2EB1AL46 878 aaPredicted RBP16.92■□□□□ 0.3
ABCD4-223ENST00000555904 NUTM2AQ8IVF1 878 aaPredicted RBP16.92■□□□□ 0.3
ABCD4-223ENST00000555904 MARF1Q9Y4F3 1742 aaKnown RBP16.92■□□□□ 0.3
ABCD4-223ENST00000555904 NFAT5O94916 1531 aa16.91■□□□□ 0.3
ABCD4-223ENST00000555904 ABCA3Q99758 1704 aa16.91■□□□□ 0.3
ABCD4-223ENST00000555904 CRYBG1Q9Y4K1 1723 aa16.91■□□□□ 0.3
ABCD4-223ENST00000555904 ZBTB7CA1YPR0 619 aa16.91■□□□□ 0.3
ABCD4-223ENST00000555904 ZC3H6P61129 1189 aaKnown RBP16.9■□□□□ 0.3
ABCD4-223ENST00000555904 MYBBP1AQ9BQG0 1328 aaKnown RBP16.9■□□□□ 0.3
ABCD4-223ENST00000555904 PPM1GO15355 546 aaPredicted RBP16.89■□□□□ 0.29
ABCD4-223ENST00000555904 PRDM11Q9NQV5 511 aa16.89■□□□□ 0.29
ABCD4-223ENST00000555904 CPDO75976 1380 aa16.89■□□□□ 0.29
ABCD4-223ENST00000555904 KIAA0232Q92628 1395 aa16.89■□□□□ 0.29
ABCD4-223ENST00000555904 ADAMTS2O95450 1211 aa16.88■□□□□ 0.29
ABCD4-223ENST00000555904 PPP2R1AP30153 589 aa16.88■□□□□ 0.29
ABCD4-223ENST00000555904 AMPHP49418 695 aa16.88■□□□□ 0.29
ABCD4-223ENST00000555904 RRS1Q15050 365 aaKnown RBP16.88■□□□□ 0.29
ABCD4-223ENST00000555904 MEX3CQ5U5Q3 659 aaKnown RBP16.88■□□□□ 0.29
ABCD4-223ENST00000555904 RTL1A6NKG5 1358 aa16.88■□□□□ 0.29
ABCD4-223ENST00000555904 KIF24Q5T7B8 1368 aa16.88■□□□□ 0.29
ABCD4-223ENST00000555904 MAP3K19Q56UN5 1328 aa16.87■□□□□ 0.29
ABCD4-223ENST00000555904 ARHGEF25Q86VW2 580 aa16.86■□□□□ 0.29
ABCD4-223ENST00000555904 CFAP53Q96M91 514 aa16.86■□□□□ 0.29
ABCD4-223ENST00000555904 POLKQ9UBT6 870 aa16.86■□□□□ 0.29
ABCD4-223ENST00000555904 FLT4P35916 1363 aa16.86■□□□□ 0.29
ABCD4-223ENST00000555904 SMG6Q86US8 1419 aaKnown RBP16.86■□□□□ 0.29
ABCD4-223ENST00000555904 FBLN1P23142 703 aa16.85■□□□□ 0.29
ABCD4-223ENST00000555904 MTHFSP49914 203 aa16.85■□□□□ 0.29
ABCD4-223ENST00000555904 EMILIN1Q9Y6C2 1016 aa16.85■□□□□ 0.29
ABCD4-223ENST00000555904 CDK12Q9NYV4 1490 aaPredicted RBP16.85■□□□□ 0.29
ABCD4-223ENST00000555904 ABCC6O95255 1503 aa16.85■□□□□ 0.29
ABCD4-223ENST00000555904 LTN1O94822 1766 aa16.84■□□□□ 0.29
ABCD4-223ENST00000555904 BLMP54132 1417 aaPredicted RBP16.83■□□□□ 0.28
ABCD4-223ENST00000555904 CHRNA2Q15822 529 aa16.83■□□□□ 0.28
ABCD4-223ENST00000555904 LRP6O75581 1613 aa16.82■□□□□ 0.28
ABCD4-223ENST00000555904 HOXC9P31274 260 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms