RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 SPATA31A3Q5VYP0 1347 aa25.55■■□□□ 1.68
PSEN1-210ENST00000554131 TNS3Q68CZ2 1445 aa25.54■■□□□ 1.68
PSEN1-210ENST00000554131 EDC4Q6P2E9 1401 aaKnown RBP25.54■■□□□ 1.68
PSEN1-210ENST00000554131 HDGFL2Q7Z4V5 671 aaPredicted RBP25.54■■□□□ 1.68
PSEN1-210ENST00000554131 CARD14Q9BXL6 1004 aa25.54■■□□□ 1.68
PSEN1-210ENST00000554131 PIK3C2AO00443 1686 aa25.54■■□□□ 1.68
PSEN1-210ENST00000554131 SHPRHQ149N8 1683 aa25.54■■□□□ 1.68
PSEN1-210ENST00000554131 COL22A1Q8NFW1 1626 aaPredicted RBP25.53■■□□□ 1.68
PSEN1-210ENST00000554131 MARF1Q9Y4F3 1742 aaKnown RBP25.52■■□□□ 1.68
PSEN1-210ENST00000554131 ZNF316A6NFI3 1004 aaPredicted RBP25.51■■□□□ 1.67
PSEN1-210ENST00000554131 TTC21BQ7Z4L5 1316 aa25.51■■□□□ 1.67
PSEN1-210ENST00000554131 CRYBG1Q9Y4K1 1723 aa25.51■■□□□ 1.67
PSEN1-210ENST00000554131 USP54Q70EL1 1684 aa25.5■■□□□ 1.67
PSEN1-210ENST00000554131 PNPLA6Q8IY17 1366 aa25.5■■□□□ 1.67
PSEN1-210ENST00000554131 LRRC59Q96AG4 307 aaKnown RBP25.5■■□□□ 1.67
PSEN1-210ENST00000554131 PANK3Q9H999 370 aa25.5■■□□□ 1.67
PSEN1-210ENST00000554131 ILDR1Q86SU0 546 aaPredicted RBP25.49■■□□□ 1.67
PSEN1-210ENST00000554131 MED1Q15648 1581 aaPredicted RBP25.48■■□□□ 1.67
PSEN1-210ENST00000554131 NSD3Q9BZ95 1437 aa25.48■■□□□ 1.67
PSEN1-210ENST00000554131 ABCA3Q99758 1704 aa25.47■■□□□ 1.67
PSEN1-210ENST00000554131 JCADQ9P266 1359 aa25.46■■□□□ 1.67
PSEN1-210ENST00000554131 TTC21AQ8NDW8 1320 aa25.46■■□□□ 1.67
PSEN1-210ENST00000554131 KIF20BQ96Q89 1820 aa25.46■■□□□ 1.67
PSEN1-210ENST00000554131 ARHGEF10O15013 1369 aa25.45■■□□□ 1.67
PSEN1-210ENST00000554131 PER1O15534 1290 aaPredicted RBP25.44■■□□□ 1.66
PSEN1-210ENST00000554131 PAK3O75914 559 aaPredicted RBP25.44■■□□□ 1.66
PSEN1-210ENST00000554131 PHRF1Q9P1Y6 1649 aaKnown RBP25.42■■□□□ 1.66
PSEN1-210ENST00000554131 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.42■■□□□ 1.66
PSEN1-210ENST00000554131 USP31Q70CQ4 1352 aa25.42■■□□□ 1.66
PSEN1-210ENST00000554131 OVOS2A0A0J9YW53 1432 aa25.41■■□□□ 1.66
PSEN1-210ENST00000554131 OVOS2Q6IE36 1432 aa25.41■■□□□ 1.66
PSEN1-210ENST00000554131 NME9Q86XW9 330 aa25.41■■□□□ 1.66
PSEN1-210ENST00000554131 ABTB2Q8N961 1025 aa25.4■■□□□ 1.66
PSEN1-210ENST00000554131 ZRANB1Q9UGI0 708 aa25.4■■□□□ 1.66
PSEN1-210ENST00000554131 SLIT3O75094 1523 aa25.4■■□□□ 1.66
PSEN1-210ENST00000554131 USP19O94966 1318 aa25.39■■□□□ 1.66
PSEN1-210ENST00000554131 FYB1O15117 783 aa25.39■■□□□ 1.66
PSEN1-210ENST00000554131 ANKRD26Q9UPS8 1709 aa25.38■■□□□ 1.65
PSEN1-210ENST00000554131 NUTM2GQ5VZR2 741 aa25.38■■□□□ 1.65
PSEN1-210ENST00000554131 LMOD2Q6P5Q4 547 aa25.37■■□□□ 1.65
PSEN1-210ENST00000554131 LRP6O75581 1613 aa25.36■■□□□ 1.65
PSEN1-210ENST00000554131 DDX10Q13206 875 aaKnown RBP25.35■■□□□ 1.65
PSEN1-210ENST00000554131 AMER1Q5JTC6 1135 aaPredicted RBP25.35■■□□□ 1.65
PSEN1-210ENST00000554131 SPATA31A6Q5VVP1 1343 aa25.35■■□□□ 1.65
PSEN1-210ENST00000554131 NLRP6P59044 892 aa25.34■■□□□ 1.65
PSEN1-210ENST00000554131 CABLES1Q8TDN4 633 aa25.34■■□□□ 1.65
PSEN1-210ENST00000554131 CGNL1Q0VF96 1302 aa25.34■■□□□ 1.65
PSEN1-210ENST00000554131 NFAT5O94916 1531 aa25.33■■□□□ 1.65
PSEN1-210ENST00000554131 NLRP13Q86W25 1043 aa25.33■■□□□ 1.65
PSEN1-210ENST00000554131 GGNBP2Q9H3C7 697 aa25.32■■□□□ 1.64
PSEN1-210ENST00000554131 KNSTRNQ9Y448 316 aa25.32■■□□□ 1.64
PSEN1-210ENST00000554131 NPC1L1Q9UHC9 1359 aa25.31■■□□□ 1.64
PSEN1-210ENST00000554131 NSD2O96028 1365 aa25.3■■□□□ 1.64
PSEN1-210ENST00000554131 PLEKHG5O94827 1062 aa25.26■■□□□ 1.63
PSEN1-210ENST00000554131 GCP02774 474 aa25.26■■□□□ 1.63
PSEN1-210ENST00000554131 COG3Q96JB2 828 aa25.26■■□□□ 1.63
PSEN1-210ENST00000554131 NUTM2BA6NNL0 878 aaPredicted RBP25.24■■□□□ 1.63
PSEN1-210ENST00000554131 NUTM2EB1AL46 878 aaPredicted RBP25.24■■□□□ 1.63
PSEN1-210ENST00000554131 NUTM2AQ8IVF1 878 aaPredicted RBP25.24■■□□□ 1.63
PSEN1-210ENST00000554131 CPDO75976 1380 aa25.23■■□□□ 1.63
PSEN1-210ENST00000554131 LTN1O94822 1766 aa25.22■■□□□ 1.63
PSEN1-210ENST00000554131 COL18A1P39060 1754 aa25.22■■□□□ 1.63
PSEN1-210ENST00000554131 LMO7Q8WWI1 1683 aa25.21■■□□□ 1.63
PSEN1-210ENST00000554131 KCNH5Q8NCM2 988 aa25.21■■□□□ 1.63
PSEN1-210ENST00000554131 FBLN1P23142 703 aa25.2■■□□□ 1.62
PSEN1-210ENST00000554131 CC2D1BQ5T0F9 858 aaKnown RBP25.2■■□□□ 1.62
PSEN1-210ENST00000554131 KIAA0232Q92628 1395 aa25.19■■□□□ 1.62
PSEN1-210ENST00000554131 COL14A1Q05707 1796 aaKnown RBP25.19■■□□□ 1.62
PSEN1-210ENST00000554131 PLCH1Q4KWH8 1693 aa25.18■■□□□ 1.62
PSEN1-210ENST00000554131 ADAMTS2O95450 1211 aa25.18■■□□□ 1.62
PSEN1-210ENST00000554131 ZC3H6P61129 1189 aaKnown RBP25.18■■□□□ 1.62
PSEN1-210ENST00000554131 ARHGEF25Q86VW2 580 aa25.18■■□□□ 1.62
PSEN1-210ENST00000554131 AATKQ6ZMQ8 1374 aa25.18■■□□□ 1.62
PSEN1-210ENST00000554131 PEAK1Q9H792 1746 aa25.17■■□□□ 1.62
PSEN1-210ENST00000554131 SOX12O15370 315 aa25.16■■□□□ 1.62
PSEN1-210ENST00000554131 HAP1P54257 671 aaPredicted RBP25.16■■□□□ 1.62
PSEN1-210ENST00000554131 MAP2P11137 1827 aaKnown RBP25.16■■□□□ 1.62
PSEN1-210ENST00000554131 ABCC6O95255 1503 aa25.16■■□□□ 1.62
PSEN1-210ENST00000554131 FAM83GA6ND36 823 aa25.15■■□□□ 1.62
PSEN1-210ENST00000554131 MORC1Q86VD1 984 aa25.15■■□□□ 1.62
PSEN1-210ENST00000554131 SLIT2O94813 1529 aa25.15■■□□□ 1.62
PSEN1-210ENST00000554131 PARD3Q8TEW0 1356 aa25.14■■□□□ 1.61
PSEN1-210ENST00000554131 NRAPQ86VF7 1730 aa25.14■■□□□ 1.61
PSEN1-210ENST00000554131 NWD2Q9ULI1 1742 aa25.14■■□□□ 1.61
PSEN1-210ENST00000554131 MAP3K19Q56UN5 1328 aa25.13■■□□□ 1.61
PSEN1-210ENST00000554131 SMG6Q86US8 1419 aaKnown RBP25.13■■□□□ 1.61
PSEN1-210ENST00000554131 RGPD5Q99666 1765 aa25.13■■□□□ 1.61
PSEN1-210ENST00000554131 RRS1Q15050 365 aaKnown RBP25.12■■□□□ 1.61
PSEN1-210ENST00000554131 CAMTA1Q9Y6Y1 1673 aa25.12■■□□□ 1.61
PSEN1-210ENST00000554131 CHRNA2Q15822 529 aa25.11■■□□□ 1.61
PSEN1-210ENST00000554131 PRDM11Q9NQV5 511 aa25.11■■□□□ 1.61
PSEN1-210ENST00000554131 TNNT2P45379 298 aaPredicted RBP25.1■■□□□ 1.61
PSEN1-210ENST00000554131 POLKQ9UBT6 870 aa25.1■■□□□ 1.61
PSEN1-210ENST00000554131 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.09■■□□□ 1.61
PSEN1-210ENST00000554131 CNGB1Q14028 1251 aaPredicted RBP25.09■■□□□ 1.61
PSEN1-210ENST00000554131 FNBP4Q8N3X1 1017 aaPredicted RBP25.09■■□□□ 1.61
PSEN1-210ENST00000554131 C8orf37Q96NL8 207 aa25.09■■□□□ 1.61
PSEN1-210ENST00000554131 EMILIN1Q9Y6C2 1016 aa25.09■■□□□ 1.61
PSEN1-210ENST00000554131 BCL9LQ86UU0 1499 aa25.09■■□□□ 1.61
PSEN1-210ENST00000554131 AXIN2Q9Y2T1 843 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms