RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 EPS8L1Q8TE68 723 aa7.95□□□□□ -1.14
PABPN1-204ENST00000554062 GZF1Q9H116 711 aaPredicted RBP7.95□□□□□ -1.14
PABPN1-204ENST00000554062 PCDHB3Q9Y5E6 796 aa7.95□□□□□ -1.14
PABPN1-204ENST00000554062 LZTS3O60299 673 aaPredicted RBP7.94□□□□□ -1.14
PABPN1-204ENST00000554062 LSM11P83369 360 aaKnown RBP eCLIP7.94□□□□□ -1.14
PABPN1-204ENST00000554062 ELOAQ14241 798 aaKnown RBP7.94□□□□□ -1.14
PABPN1-204ENST00000554062 PUS10Q3MIT2 529 aaKnown RBP7.94□□□□□ -1.14
PABPN1-204ENST00000554062 NBPF14Q5TI25 921 aa7.94□□□□□ -1.14
PABPN1-204ENST00000554062 BRICD5Q6PL45 260 aa7.94□□□□□ -1.14
PABPN1-204ENST00000554062 ADGRD1Q6QNK2 874 aa7.94□□□□□ -1.14
PABPN1-204ENST00000554062 VRTNQ9H8Y1 702 aa7.94□□□□□ -1.14
PABPN1-204ENST00000554062 TSR3Q9UJK0 312 aaKnown RBP7.94□□□□□ -1.14
PABPN1-204ENST00000554062 SOWAHBA6NEL2 793 aa7.93□□□□□ -1.14
PABPN1-204ENST00000554062 PTK2Q05397 1052 aa7.93□□□□□ -1.14
PABPN1-204ENST00000554062 MSS51Q4VC12 460 aa7.93□□□□□ -1.14
PABPN1-204ENST00000554062 PLEKHM2Q8IWE5 1019 aa7.93□□□□□ -1.14
PABPN1-204ENST00000554062 FAM205CA6NFA0 338 aa7.92□□□□□ -1.14
PABPN1-204ENST00000554062 F12P00748 615 aaPredicted RBP7.92□□□□□ -1.14
PABPN1-204ENST00000554062 FBXO45P0C2W1 286 aa7.92□□□□□ -1.14
PABPN1-204ENST00000554062 MFAP1P55081 439 aaKnown RBP7.92□□□□□ -1.14
PABPN1-204ENST00000554062 CCNYL3P0C7X3 344 aa7.91□□□□□ -1.14
PABPN1-204ENST00000554062 RNF19BQ6ZMZ0 732 aa7.91□□□□□ -1.14
PABPN1-204ENST00000554062 HPS5Q9UPZ3 1129 aa7.91□□□□□ -1.14
PABPN1-204ENST00000554062 PDXDC2PQ6P474 469 aa7.9□□□□□ -1.14
PABPN1-204ENST00000554062 BLOC1S3Q6QNY0 202 aa7.9□□□□□ -1.14
PABPN1-204ENST00000554062 TBC1D9Q6ZT07 1266 aa7.9□□□□□ -1.14
PABPN1-204ENST00000554062 NYAP1Q6ZVC0 841 aa7.9□□□□□ -1.14
PABPN1-204ENST00000554062 SCUBE3Q8IX30 993 aa7.9□□□□□ -1.14
PABPN1-204ENST00000554062 CTHP32929 405 aa7.89□□□□□ -1.15
PABPN1-204ENST00000554062 SLFNL1Q499Z3 407 aa7.89□□□□□ -1.15
PABPN1-204ENST00000554062 THAP11Q96EK4 314 aa7.89□□□□□ -1.15
PABPN1-204ENST00000554062 USP17L3A6NCW0 530 aa7.88□□□□□ -1.15
PABPN1-204ENST00000554062 USP17L4A6NCW7 530 aa7.88□□□□□ -1.15
PABPN1-204ENST00000554062 FAM196BA6NMK8 535 aa7.88□□□□□ -1.15
PABPN1-204ENST00000554062 USP17L5A8MUK1 530 aa7.88□□□□□ -1.15
PABPN1-204ENST00000554062 HRO43593 1189 aa7.88□□□□□ -1.15
PABPN1-204ENST00000554062 USP17L2Q6R6M4 530 aa7.88□□□□□ -1.15
PABPN1-204ENST00000554062 USP17L1Q7RTZ2 530 aa7.88□□□□□ -1.15
PABPN1-204ENST00000554062 MARVELD3Q96A59 401 aa7.88□□□□□ -1.15
PABPN1-204ENST00000554062 HS3ST6Q96QI5 342 aa7.88□□□□□ -1.15
PABPN1-204ENST00000554062 ATP5J2-PTCD1G3V325 749 aa7.87□□□□□ -1.15
PABPN1-204ENST00000554062 DXOO77932 396 aaKnown RBP7.87□□□□□ -1.15
PABPN1-204ENST00000554062 SKIP12755 728 aa7.87□□□□□ -1.15
PABPN1-204ENST00000554062 APLP1P51693 650 aa7.87□□□□□ -1.15
PABPN1-204ENST00000554062 MAP7D1Q3KQU3 841 aa7.87□□□□□ -1.15
PABPN1-204ENST00000554062 WNT2BQ93097 391 aa7.87□□□□□ -1.15
PABPN1-204ENST00000554062 NUDT12Q9BQG2 462 aa7.87□□□□□ -1.15
PABPN1-204ENST00000554062 EVA1BQ9NVM1 165 aa7.87□□□□□ -1.15
PABPN1-204ENST00000554062 GNEQ9Y223 722 aaKnown RBP7.87□□□□□ -1.15
PABPN1-204ENST00000554062 TMEM88BA6NKF7 163 aa7.86□□□□□ -1.15
PABPN1-204ENST00000554062 CCDC27Q2M243 656 aa7.86□□□□□ -1.15
PABPN1-204ENST00000554062 KANK4Q5T7N3 995 aaPredicted RBP7.86□□□□□ -1.15
PABPN1-204ENST00000554062 LARP1Q6PKG0 1096 aaKnown RBP7.86□□□□□ -1.15
PABPN1-204ENST00000554062 SND1Q7KZF4 910 aaKnown RBP eCLIP7.86□□□□□ -1.15
PABPN1-204ENST00000554062 TRIM50Q86XT4 487 aa7.86□□□□□ -1.15
PABPN1-204ENST00000554062 RGS22Q8NE09 1264 aa7.86□□□□□ -1.15
PABPN1-204ENST00000554062 CCER1Q8TC90 406 aaPredicted RBP7.86□□□□□ -1.15
PABPN1-204ENST00000554062 MMP16P51512 607 aa7.85□□□□□ -1.15
PABPN1-204ENST00000554062 KCNH2Q12809 1159 aa7.85□□□□□ -1.15
PABPN1-204ENST00000554062 CCDC125Q86Z20 511 aa7.85□□□□□ -1.15
PABPN1-204ENST00000554062 RNF135Q8IUD6 432 aa7.85□□□□□ -1.15
PABPN1-204ENST00000554062 SPSB2Q99619 263 aa7.85□□□□□ -1.15
PABPN1-204ENST00000554062 MAP10Q9P2G4 905 aa7.85□□□□□ -1.15
PABPN1-204ENST00000554062 IVNS1ABPQ9Y6Y0 642 aa7.85□□□□□ -1.15
PABPN1-204ENST00000554062 ATP1A2P50993 1020 aa7.84□□□□□ -1.15
PABPN1-204ENST00000554062 NOVA2Q9UNW9 492 aaKnown RBP7.84□□□□□ -1.15
PABPN1-204ENST00000554062 BCAMP50895 628 aa7.83□□□□□ -1.16
PABPN1-204ENST00000554062 EML3Q32P44 896 aa7.83□□□□□ -1.16
PABPN1-204ENST00000554062 CEP126Q9P2H0 1117 aa7.83□□□□□ -1.16
PABPN1-204ENST00000554062 MTMR7Q9Y216 660 aa7.83□□□□□ -1.16
PABPN1-204ENST00000554062 AMOTL2Q9Y2J4 779 aa7.83□□□□□ -1.16
PABPN1-204ENST00000554062 PCDHB9Q9Y5E1 797 aa7.83□□□□□ -1.16
PABPN1-204ENST00000554062 CDCA8Q53HL2 280 aa7.82□□□□□ -1.16
PABPN1-204ENST00000554062 TRIM52Q96A61 297 aa7.82□□□□□ -1.16
PABPN1-204ENST00000554062 ARHGAP9Q9BRR9 750 aa7.82□□□□□ -1.16
PABPN1-204ENST00000554062 USP17L15C9J2P7 530 aa7.81□□□□□ -1.16
PABPN1-204ENST00000554062 USP17L10C9JJH3 530 aa7.81□□□□□ -1.16
PABPN1-204ENST00000554062 USP17L13C9JLJ4 530 aa7.81□□□□□ -1.16
PABPN1-204ENST00000554062 USP17L12C9JPN9 530 aa7.81□□□□□ -1.16
PABPN1-204ENST00000554062 USP17L11C9JVI0 530 aa7.81□□□□□ -1.16
PABPN1-204ENST00000554062 USP17L21D6R901 530 aa7.81□□□□□ -1.16
PABPN1-204ENST00000554062 USP17L18D6R9N7 530 aa7.81□□□□□ -1.16
PABPN1-204ENST00000554062 USP17L22D6RA61 530 aa7.81□□□□□ -1.16
PABPN1-204ENST00000554062 USP17L17D6RBQ6 530 aa7.81□□□□□ -1.16
PABPN1-204ENST00000554062 USP17L19D6RCP7 530 aa7.81□□□□□ -1.16
PABPN1-204ENST00000554062 USP17L20D6RJB6 530 aa7.81□□□□□ -1.16
PABPN1-204ENST00000554062 ADH1BP00325 375 aa7.81□□□□□ -1.16
PABPN1-204ENST00000554062 USP17L24Q0WX57 530 aa7.81□□□□□ -1.16
PABPN1-204ENST00000554062 SWI5Q1ZZU3 235 aa7.81□□□□□ -1.16
PABPN1-204ENST00000554062 RNF20Q5VTR2 975 aa7.81□□□□□ -1.16
PABPN1-204ENST00000554062 ZBTB33Q86T24 672 aa7.81□□□□□ -1.16
PABPN1-204ENST00000554062 FAM200AQ8TCP9 573 aa7.81□□□□□ -1.16
PABPN1-204ENST00000554062 MKRN1Q9UHC7 482 aaKnown RBP7.81□□□□□ -1.16
PABPN1-204ENST00000554062 RBM19Q9Y4C8 960 aaKnown RBP7.81□□□□□ -1.16
PABPN1-204ENST00000554062 PIK3CDO00329 1044 aa7.8□□□□□ -1.16
PABPN1-204ENST00000554062 ERCC3P19447 782 aa7.8□□□□□ -1.16
PABPN1-204ENST00000554062 RASA1P20936 1047 aa7.8□□□□□ -1.16
PABPN1-204ENST00000554062 ARID4AP29374 1257 aaPredicted RBP7.8□□□□□ -1.16
PABPN1-204ENST00000554062 NCOA4Q13772 614 aa7.8□□□□□ -1.16
PABPN1-204ENST00000554062 TMEM164Q5U3C3 297 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms