RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 PMFBP1Q8TBY8 1022 aa14.5□□□□□ -0.09
ACTN1-208ENST00000553370 ZRANB1Q9UGI0 708 aa14.5□□□□□ -0.09
ACTN1-208ENST00000553370 TRAK1Q9UPV9 953 aa14.5□□□□□ -0.09
ACTN1-208ENST00000553370 TRPM3Q9HCF6 1732 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-208ENST00000553370 GPRASP1Q5JY77 1395 aa14.49□□□□□ -0.09
ACTN1-208ENST00000553370 MINK1Q8N4C8 1332 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-208ENST00000553370 SF3B2Q13435 895 aaKnown RBP14.49□□□□□ -0.09
ACTN1-208ENST00000553370 CABLES1Q8TDN4 633 aa14.49□□□□□ -0.09
ACTN1-208ENST00000553370 DCAF11Q8TEB1 546 aa14.49□□□□□ -0.09
ACTN1-208ENST00000553370 HIRIP3Q9BW71 556 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-208ENST00000553370 SLIT2O94813 1529 aa14.49□□□□□ -0.09
ACTN1-208ENST00000553370 SBNO1A3KN83 1393 aa14.48□□□□□ -0.09
ACTN1-208ENST00000553370 SRCAPQ6ZRS2 3230 aa14.48□□□□□ -0.09
ACTN1-208ENST00000553370 CCDC125Q86Z20 511 aa14.48□□□□□ -0.09
ACTN1-208ENST00000553370 ADGRB1O14514 1584 aa14.47□□□□□ -0.09
ACTN1-208ENST00000553370 COL14A1Q05707 1796 aaKnown RBP14.47□□□□□ -0.09
ACTN1-208ENST00000553370 TULP4Q9NRJ4 1543 aa14.47□□□□□ -0.09
ACTN1-208ENST00000553370 ALS2Q96Q42 1657 aa14.47□□□□□ -0.09
ACTN1-208ENST00000553370 NRAPQ86VF7 1730 aa14.46□□□□□ -0.09
ACTN1-208ENST00000553370 PAK3O75914 559 aaPredicted RBP14.45□□□□□ -0.1
ACTN1-208ENST00000553370 NGDNQ8NEJ9 315 aaKnown RBP14.45□□□□□ -0.1
ACTN1-208ENST00000553370 BLMP54132 1417 aaPredicted RBP14.44□□□□□ -0.1
ACTN1-208ENST00000553370 ZNF219Q9P2Y4 722 aaPredicted RBP14.44□□□□□ -0.1
ACTN1-208ENST00000553370 VPS72Q15906 364 aa14.43□□□□□ -0.1
ACTN1-208ENST00000553370 SEPT12Q8IYM1 358 aa14.43□□□□□ -0.1
ACTN1-208ENST00000553370 RGPD1P0DJD0 1748 aa14.42□□□□□ -0.1
ACTN1-208ENST00000553370 KIAA1210Q9ULL0 1709 aa14.42□□□□□ -0.1
ACTN1-208ENST00000553370 CRYBG1Q9Y4K1 1723 aa14.42□□□□□ -0.1
ACTN1-208ENST00000553370 PHRF1Q9P1Y6 1649 aaKnown RBP14.41□□□□□ -0.1
ACTN1-208ENST00000553370 WASLO00401 505 aaPredicted RBP14.4□□□□□ -0.1
ACTN1-208ENST00000553370 KRT27Q7Z3Y8 459 aa14.4□□□□□ -0.1
ACTN1-208ENST00000553370 STAC3Q96MF2 364 aa14.4□□□□□ -0.1
ACTN1-208ENST00000553370 BTG4Q9NY30 223 aa14.4□□□□□ -0.1
ACTN1-208ENST00000553370 C1QBPQ07021 282 aaKnown RBP14.39□□□□□ -0.11
ACTN1-208ENST00000553370 TOPAZ1Q8N9V7 1692 aa14.39□□□□□ -0.11
ACTN1-208ENST00000553370 FAM83GA6ND36 823 aa14.38□□□□□ -0.11
ACTN1-208ENST00000553370 FAM98CQ17RN3 349 aaKnown RBP14.38□□□□□ -0.11
ACTN1-208ENST00000553370 PRDM11Q9NQV5 511 aa14.38□□□□□ -0.11
ACTN1-208ENST00000553370 PRR36Q9H6K5 1346 aa14.38□□□□□ -0.11
ACTN1-208ENST00000553370 ATP7BP35670 1465 aa14.38□□□□□ -0.11
ACTN1-208ENST00000553370 QRICH2Q9H0J4 1663 aa14.36□□□□□ -0.11
ACTN1-208ENST00000553370 DEFB132Q7Z7B7 95 aa14.36□□□□□ -0.11
ACTN1-208ENST00000553370 BAG6P46379 1132 aa14.35□□□□□ -0.11
ACTN1-208ENST00000553370 NUDT16Q96DE0 195 aaKnown RBP14.35□□□□□ -0.11
ACTN1-208ENST00000553370 NUTM2GQ5VZR2 741 aa14.33□□□□□ -0.12
ACTN1-208ENST00000553370 CDK19Q9BWU1 502 aa14.33□□□□□ -0.12
ACTN1-208ENST00000553370 STRN4Q9NRL3 753 aa14.33□□□□□ -0.12
ACTN1-208ENST00000553370 THSD7AQ9UPZ6 1657 aa14.33□□□□□ -0.12
ACTN1-208ENST00000553370 TNS1Q9HBL0 1735 aaKnown RBP14.32□□□□□ -0.12
ACTN1-208ENST00000553370 HRCP23327 699 aa14.32□□□□□ -0.12
ACTN1-208ENST00000553370 KIAA0232Q92628 1395 aa14.32□□□□□ -0.12
ACTN1-208ENST00000553370 SRPK2P78362 688 aaKnown RBP14.31□□□□□ -0.12
ACTN1-208ENST00000553370 SPATA31A5Q5VU36 1347 aa14.31□□□□□ -0.12
ACTN1-208ENST00000553370 SPATA31A7Q8IWB4 1347 aa14.31□□□□□ -0.12
ACTN1-208ENST00000553370 NRKQ7Z2Y5 1582 aa14.3□□□□□ -0.12
ACTN1-208ENST00000553370 LRP5O75197 1615 aa14.3□□□□□ -0.12
ACTN1-208ENST00000553370 ONECUT3O60422 494 aaPredicted RBP14.3□□□□□ -0.12
ACTN1-208ENST00000553370 EVA1CP58658 441 aa14.3□□□□□ -0.12
ACTN1-208ENST00000553370 ZC3H6P61129 1189 aaKnown RBP14.3□□□□□ -0.12
ACTN1-208ENST00000553370 CHRNA2Q15822 529 aa14.3□□□□□ -0.12
ACTN1-208ENST00000553370 ABTB2Q8N961 1025 aa14.29□□□□□ -0.12
ACTN1-208ENST00000553370 USP35Q9P2H5 1018 aa14.29□□□□□ -0.12
ACTN1-208ENST00000553370 FBXO3Q9UK99 471 aa14.29□□□□□ -0.12
ACTN1-208ENST00000553370 ACEP12821 1306 aa14.29□□□□□ -0.12
ACTN1-208ENST00000553370 ZBTB7CA1YPR0 619 aa14.28□□□□□ -0.12
ACTN1-208ENST00000553370 PSDA5PKW4 1024 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-208ENST00000553370 FAM182BQ5T319 152 aa14.28□□□□□ -0.12
ACTN1-208ENST00000553370 CENPJQ9HC77 1338 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-208ENST00000553370 CCDC61Q9Y6R9 512 aa14.28□□□□□ -0.12
ACTN1-208ENST00000553370 PPIP5K1Q6PFW1 1433 aa14.27□□□□□ -0.12
ACTN1-208ENST00000553370 POLR3AO14802 1390 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-208ENST00000553370 KAT6BQ8WYB5 2073 aa14.26□□□□□ -0.13
ACTN1-208ENST00000553370 SPATA31A1Q5TZJ5 1347 aa14.25□□□□□ -0.13
ACTN1-208ENST00000553370 SPDYE4A6NLX3 237 aa14.25□□□□□ -0.13
ACTN1-208ENST00000553370 EN1Q05925 392 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-208ENST00000553370 NBPF8Q3BBV2 869 aa14.25□□□□□ -0.13
ACTN1-208ENST00000553370 SSH2Q76I76 1423 aa14.24□□□□□ -0.13
ACTN1-208ENST00000553370 TRPM1Q7Z4N2 1603 aa14.24□□□□□ -0.13
ACTN1-208ENST00000553370 PDE3BQ13370 1112 aa14.24□□□□□ -0.13
ACTN1-208ENST00000553370 AKAP12Q02952 1782 aa14.24□□□□□ -0.13
ACTN1-208ENST00000553370 WNK3Q9BYP7 1800 aa14.23□□□□□ -0.13
ACTN1-208ENST00000553370 CACNB1Q02641 598 aaPredicted RBP14.23□□□□□ -0.13
ACTN1-208ENST00000553370 NBPF1Q3BBV0 1214 aa14.23□□□□□ -0.13
ACTN1-208ENST00000553370 NLRP13Q86W25 1043 aa14.23□□□□□ -0.13
ACTN1-208ENST00000553370 CABP2Q9NPB3 220 aa14.23□□□□□ -0.13
ACTN1-208ENST00000553370 PARP4Q9UKK3 1724 aaKnown RBP14.23□□□□□ -0.13
ACTN1-208ENST00000553370 LMO7Q8WWI1 1683 aa14.23□□□□□ -0.13
ACTN1-208ENST00000553370 RGPD5Q99666 1765 aa14.22□□□□□ -0.13
ACTN1-208ENST00000553370 PLEKHG3A1L390 1219 aa14.22□□□□□ -0.13
ACTN1-208ENST00000553370 TRIM37O94972 964 aa14.22□□□□□ -0.13
ACTN1-208ENST00000553370 FAM196AQ6ZSG2 479 aa14.22□□□□□ -0.13
ACTN1-208ENST00000553370 CAMTA1Q9Y6Y1 1673 aa14.21□□□□□ -0.13
ACTN1-208ENST00000553370 RREB1Q92766 1687 aa14.2□□□□□ -0.14
ACTN1-208ENST00000553370 R3HDM1Q15032 1099 aaKnown RBP14.2□□□□□ -0.14
ACTN1-208ENST00000553370 TCP11L2Q8N4U5 519 aa14.2□□□□□ -0.14
ACTN1-208ENST00000553370 NUP188Q5SRE5 1749 aa14.2□□□□□ -0.14
ACTN1-208ENST00000553370 CPDO75976 1380 aa14.2□□□□□ -0.14
ACTN1-208ENST00000553370 PIK3C2AO00443 1686 aa14.2□□□□□ -0.14
ACTN1-208ENST00000553370 SBF2Q86WG5 1849 aa14.2□□□□□ -0.14
ACTN1-208ENST00000553370 USP19O94966 1318 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms