RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	OAT	P04181	439 aa		10.41	□□□□□ -0.74
CNOT2-238	ENST00000552422	FECH	P22830	423 aa		10.41	□□□□□ -0.74
CNOT2-238	ENST00000552422	KCNC4	Q03721	635 aa		10.41	□□□□□ -0.74
CNOT2-238	ENST00000552422	KANK4	Q5T7N3	995 aa	Predicted RBP	10.41	□□□□□ -0.74
CNOT2-238	ENST00000552422	TMEM134	Q9H6X4	195 aa		10.41	□□□□□ -0.74
CNOT2-238	ENST00000552422	PLEKHH2	Q8IVE3	1493 aa		10.41	□□□□□ -0.74
CNOT2-238	ENST00000552422	SIGLEC1	Q9BZZ2	1709 aa		10.41	□□□□□ -0.74
CNOT2-238	ENST00000552422	ZFYVE16	Q7Z3T8	1539 aa		10.4	□□□□□ -0.74
CNOT2-238	ENST00000552422	MAGI2	Q86UL8	1455 aa		10.4	□□□□□ -0.74
CNOT2-238	ENST00000552422	KIAA1107	Q9UPP5	1409 aa		10.4	□□□□□ -0.75
CNOT2-238	ENST00000552422	ABCA6	Q8N139	1617 aa		10.4	□□□□□ -0.75
CNOT2-238	ENST00000552422	INO80	Q9ULG1	1556 aa	Predicted RBP	10.39	□□□□□ -0.75
CNOT2-238	ENST00000552422	CROCC2	H7BZ55	1655 aa		10.39	□□□□□ -0.75
CNOT2-238	ENST00000552422	CAMSAP2	Q08AD1	1489 aa		10.39	□□□□□ -0.75
CNOT2-238	ENST00000552422	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.39	□□□□□ -0.75
CNOT2-238	ENST00000552422	PXYLP1	Q8TE99	480 aa		10.39	□□□□□ -0.75
CNOT2-238	ENST00000552422	MYOM3	Q5VTT5	1437 aa		10.39	□□□□□ -0.75
CNOT2-238	ENST00000552422		A0A0G2JS52	829 aa		10.38	□□□□□ -0.75
CNOT2-238	ENST00000552422	APLP1	P51693	650 aa		10.38	□□□□□ -0.75
CNOT2-238	ENST00000552422	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.38	□□□□□ -0.75
CNOT2-238	ENST00000552422	TRAPPC8	Q9Y2L5	1435 aa		10.38	□□□□□ -0.75
CNOT2-238	ENST00000552422	ARHGEF5	Q12774	1597 aa		10.38	□□□□□ -0.75
CNOT2-238	ENST00000552422	DIP2C	Q9Y2E4	1556 aa		10.38	□□□□□ -0.75
CNOT2-238	ENST00000552422	PTPN23	Q9H3S7	1636 aa		10.37	□□□□□ -0.75
CNOT2-238	ENST00000552422	METTL3	Q86U44	580 aa	Known RBP	10.37	□□□□□ -0.75
CNOT2-238	ENST00000552422	ADGB	Q8N7X0	1667 aa		10.37	□□□□□ -0.75
CNOT2-238	ENST00000552422	MLH3	Q9UHC1	1453 aa		10.36	□□□□□ -0.75
CNOT2-238	ENST00000552422	BCORL1	Q5H9F3	1711 aa		10.36	□□□□□ -0.75
CNOT2-238	ENST00000552422	RERE	Q9P2R6	1566 aa		10.36	□□□□□ -0.75
CNOT2-238	ENST00000552422	MIA2	Q96PC5	1412 aa		10.36	□□□□□ -0.75
CNOT2-238	ENST00000552422	YEATS2	Q9ULM3	1422 aa		10.36	□□□□□ -0.75
CNOT2-238	ENST00000552422	ATP7A	Q04656	1500 aa		10.36	□□□□□ -0.75
CNOT2-238	ENST00000552422	MBD5	Q9P267	1494 aa		10.36	□□□□□ -0.75
CNOT2-238	ENST00000552422	MTR	Q99707	1265 aa		10.35	□□□□□ -0.75
CNOT2-238	ENST00000552422	TJAP1	Q5JTD0	557 aa		10.34	□□□□□ -0.75
CNOT2-238	ENST00000552422	PRR14	Q9BWN1	585 aa		10.34	□□□□□ -0.75
CNOT2-238	ENST00000552422	IL21	Q9HBE4	155 aa		10.34	□□□□□ -0.75
CNOT2-238	ENST00000552422	ZNF777	Q9ULD5	760 aa	Predicted RBP	10.34	□□□□□ -0.75
CNOT2-238	ENST00000552422	CCDC141	Q6ZP82	1450 aa		10.34	□□□□□ -0.75
CNOT2-238	ENST00000552422	ADAMTSL3	P82987	1691 aa		10.34	□□□□□ -0.75
CNOT2-238	ENST00000552422	ZNF644	Q9H582	1327 aa	Predicted RBP	10.33	□□□□□ -0.76
CNOT2-238	ENST00000552422	FGD6	Q6ZV73	1430 aa		10.33	□□□□□ -0.76
CNOT2-238	ENST00000552422	DNMT1	P26358	1616 aa	Known RBP	10.33	□□□□□ -0.76
CNOT2-238	ENST00000552422	AFAP1	Q8N556	730 aa		10.33	□□□□□ -0.76
CNOT2-238	ENST00000552422	MAST1	Q9Y2H9	1570 aa		10.33	□□□□□ -0.76
CNOT2-238	ENST00000552422	FER1L4	A9Z1Z3	1794 aa		10.33	□□□□□ -0.76
CNOT2-238	ENST00000552422	C9orf84	Q5VXU9	1444 aa		10.33	□□□□□ -0.76
CNOT2-238	ENST00000552422	PLXNC1	O60486	1568 aa		10.32	□□□□□ -0.76
CNOT2-238	ENST00000552422	ATP10A	O60312	1499 aa		10.32	□□□□□ -0.76
CNOT2-238	ENST00000552422	TCOF1	Q13428	1488 aa	Known RBP	10.32	□□□□□ -0.76
CNOT2-238	ENST00000552422	HNRNPM	P52272	730 aa	Known RBP eCLIP	10.31	□□□□□ -0.76	1e-8	■■■■□ 24.2
CNOT2-238	ENST00000552422	MADD	Q8WXG6	1647 aa		10.3	□□□□□ -0.76
CNOT2-238	ENST00000552422	CFH	P08603	1231 aa		10.3	□□□□□ -0.76
CNOT2-238	ENST00000552422	COPS2	P61201	443 aa		10.3	□□□□□ -0.76
CNOT2-238	ENST00000552422	KMT5B	Q4FZB7	885 aa		10.3	□□□□□ -0.76
CNOT2-238	ENST00000552422	PCDHB3	Q9Y5E6	796 aa		10.3	□□□□□ -0.76
CNOT2-238	ENST00000552422	AGL	P35573	1532 aa		10.29	□□□□□ -0.76
CNOT2-238	ENST00000552422	RGS20	O76081	388 aa		10.29	□□□□□ -0.76
CNOT2-238	ENST00000552422	RSPH4A	Q5TD94	716 aa		10.29	□□□□□ -0.76
CNOT2-238	ENST00000552422	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.29	□□□□□ -0.76
CNOT2-238	ENST00000552422	NLRP7	Q8WX94	980 aa		10.29	□□□□□ -0.76
CNOT2-238	ENST00000552422	RTEL1-TNFRSF6B	F6WH68	1400 aa		10.29	□□□□□ -0.76
CNOT2-238	ENST00000552422	SHANK2	Q9UPX8	1470 aa		10.29	□□□□□ -0.76
CNOT2-238	ENST00000552422	RIMS1	Q86UR5	1692 aa	Known RBP	10.28	□□□□□ -0.76
CNOT2-238	ENST00000552422	SLC10A3	P09131	477 aa		10.28	□□□□□ -0.76
CNOT2-238	ENST00000552422	MAP2K5	Q13163	448 aa		10.28	□□□□□ -0.76
CNOT2-238	ENST00000552422	ZNF516	Q92618	1163 aa		10.28	□□□□□ -0.76
CNOT2-238	ENST00000552422	SPAG9	O60271	1321 aa	Known RBP	10.28	□□□□□ -0.76
CNOT2-238	ENST00000552422	LMOD2	Q6P5Q4	547 aa		10.27	□□□□□ -0.77
CNOT2-238	ENST00000552422	PHOX2B	Q99453	314 aa		10.27	□□□□□ -0.77
CNOT2-238	ENST00000552422	DAXX	Q9UER7	740 aa	Predicted RBP	10.27	□□□□□ -0.77
CNOT2-238	ENST00000552422	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.26	□□□□□ -0.77
CNOT2-238	ENST00000552422	DAPK1	P53355	1430 aa		10.25	□□□□□ -0.77
CNOT2-238	ENST00000552422	A2M	P01023	1474 aa		10.25	□□□□□ -0.77
CNOT2-238	ENST00000552422	ACTN4	O43707	911 aa	Known RBP	10.25	□□□□□ -0.77
CNOT2-238	ENST00000552422	BLOC1S3	Q6QNY0	202 aa		10.25	□□□□□ -0.77
CNOT2-238	ENST00000552422	RDH13	Q8NBN7	331 aa		10.25	□□□□□ -0.77
CNOT2-238	ENST00000552422	MROH2A	A6NES4	1674 aa		10.25	□□□□□ -0.77
CNOT2-238	ENST00000552422	ABCC5	O15440	1437 aa		10.24	□□□□□ -0.77
CNOT2-238	ENST00000552422	DDX11L8	A8MPP1	907 aa		10.24	□□□□□ -0.77
CNOT2-238	ENST00000552422	RNF17	Q9BXT8	1623 aa	Known RBP	10.24	□□□□□ -0.77
CNOT2-238	ENST00000552422	IRF6	O14896	467 aa		10.23	□□□□□ -0.77
CNOT2-238	ENST00000552422	ZPR1	O75312	459 aa		10.23	□□□□□ -0.77
CNOT2-238	ENST00000552422	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.23	□□□□□ -0.77
CNOT2-238	ENST00000552422	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.23	□□□□□ -0.77
CNOT2-238	ENST00000552422	C3	P01024	1663 aa		10.22	□□□□□ -0.77
CNOT2-238	ENST00000552422	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.22	□□□□□ -0.77
CNOT2-238	ENST00000552422	SULF1	Q8IWU6	871 aa		10.22	□□□□□ -0.77
CNOT2-238	ENST00000552422	NKX2-3	Q8TAU0	364 aa		10.22	□□□□□ -0.77
CNOT2-238	ENST00000552422	RRBP1	Q9P2E9	1410 aa	Known RBP	10.22	□□□□□ -0.77
CNOT2-238	ENST00000552422	DEPDC5	O75140	1603 aa		10.22	□□□□□ -0.77
CNOT2-238	ENST00000552422	CLTC	Q00610	1675 aa	Known RBP	10.22	□□□□□ -0.77
CNOT2-238	ENST00000552422	SETD1B	Q9UPS6	1966 aa	Known RBP	10.21	□□□□□ -0.77
CNOT2-238	ENST00000552422	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	10.21	□□□□□ -0.78	3e-6	■■□□□ 12.8
CNOT2-238	ENST00000552422	ADGRL2	O95490	1459 aa		10.21	□□□□□ -0.78
CNOT2-238	ENST00000552422	PTPRM	P28827	1452 aa		10.21	□□□□□ -0.78
CNOT2-238	ENST00000552422	DUOX2	Q9NRD8	1548 aa		10.21	□□□□□ -0.78
CNOT2-238	ENST00000552422	TSPY4	P0CV99	314 aa		10.2	□□□□□ -0.78
CNOT2-238	ENST00000552422	TSPY10	P0CW01	314 aa		10.2	□□□□□ -0.78
CNOT2-238	ENST00000552422	ZC3H13	Q5T200	1668 aa	Known RBP	10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms